RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 GRIA1P42261 906 aa14.48□□□□□ -0.09
SPG7-210ENST00000564409 PTGIRP43119 386 aa14.48□□□□□ -0.09
SPG7-210ENST00000564409 NPY2RP49146 381 aa14.48□□□□□ -0.09
SPG7-210ENST00000564409 CDK16Q00536 496 aa14.48□□□□□ -0.09
SPG7-210ENST00000564409 SNX1Q13596 522 aa14.48□□□□□ -0.09
SPG7-210ENST00000564409 KYNUQ16719 465 aa14.48□□□□□ -0.09
SPG7-210ENST00000564409 ZNF385CQ66K41 422 aaPredicted RBP14.48□□□□□ -0.09
SPG7-210ENST00000564409 ZNF534Q76KX8 674 aa14.48□□□□□ -0.09
SPG7-210ENST00000564409 DCUN1D3Q8IWE4 304 aa14.48□□□□□ -0.09
SPG7-210ENST00000564409 FLVCR1-AS1Q8TAF5 88 aa14.48□□□□□ -0.09
SPG7-210ENST00000564409 MIB2Q96AX9 1013 aa14.48□□□□□ -0.09
SPG7-210ENST00000564409 PANX3Q96QZ0 392 aa14.48□□□□□ -0.09
SPG7-210ENST00000564409 RAB11FIP5Q9BXF6 653 aa14.48□□□□□ -0.09
SPG7-210ENST00000564409 INTS7Q9NVH2 962 aaKnown RBP14.48□□□□□ -0.09
SPG7-210ENST00000564409 BFARQ9NZS9 450 aa14.48□□□□□ -0.09
SPG7-210ENST00000564409 SLC2A6Q9UGQ3 507 aa14.48□□□□□ -0.09
SPG7-210ENST00000564409 PLCL2Q9UPR0 1127 aa14.48□□□□□ -0.09
SPG7-210ENST00000564409 PCM1Q15154 2024 aa14.48□□□□□ -0.09
SPG7-210ENST00000564409 ARGFXA6NJG6 315 aa14.47□□□□□ -0.09
SPG7-210ENST00000564409 ISM1B1AKI9 464 aa14.47□□□□□ -0.09
SPG7-210ENST00000564409 H3BMH7 237 aa14.47□□□□□ -0.09
SPG7-210ENST00000564409 K7EM74 188 aa14.47□□□□□ -0.09
SPG7-210ENST00000564409 CD3EAPO15446 510 aaKnown RBP14.47□□□□□ -0.09
SPG7-210ENST00000564409 DNAJB5O75953 348 aa14.47□□□□□ -0.09
SPG7-210ENST00000564409 TPBGLP0DKB5 382 aa14.47□□□□□ -0.09
SPG7-210ENST00000564409 NR1D1P20393 614 aa14.47□□□□□ -0.09
SPG7-210ENST00000564409 VARSP26640 1264 aaKnown RBP14.47□□□□□ -0.09
SPG7-210ENST00000564409 AOAHP28039 575 aa14.47□□□□□ -0.09
SPG7-210ENST00000564409 CCR7P32248 378 aa14.47□□□□□ -0.09
SPG7-210ENST00000564409 RPL22P35268 128 aaKnown RBP14.47□□□□□ -0.09
SPG7-210ENST00000564409 GABRA4P48169 554 aa14.47□□□□□ -0.09
SPG7-210ENST00000564409 CCL11P51671 97 aa14.47□□□□□ -0.09
SPG7-210ENST00000564409 DCDP81605 110 aaKnown RBP14.47□□□□□ -0.09
SPG7-210ENST00000564409 HSPA14Q0VDF9 509 aa14.47□□□□□ -0.09
SPG7-210ENST00000564409 UBAP2LQ14157 1087 aaKnown RBP14.47□□□□□ -0.09
SPG7-210ENST00000564409 SSPNQ14714 243 aa14.47□□□□□ -0.09
SPG7-210ENST00000564409 IGFBP7Q16270 282 aa14.47□□□□□ -0.09
SPG7-210ENST00000564409 COLEC12Q5KU26 742 aa14.47□□□□□ -0.09
SPG7-210ENST00000564409 LCN10Q6JVE6 187 aa14.47□□□□□ -0.09
SPG7-210ENST00000564409 TTC23LQ6PF05 361 aa14.47□□□□□ -0.09
SPG7-210ENST00000564409 GLIS1Q8NBF1 620 aa14.47□□□□□ -0.09
SPG7-210ENST00000564409 GSDMBQ8TAX9 411 aa14.47□□□□□ -0.09
SPG7-210ENST00000564409 COL26A1Q96A83 441 aa14.47□□□□□ -0.09
SPG7-210ENST00000564409 ZNF778Q96MU6 729 aa14.47□□□□□ -0.09
SPG7-210ENST00000564409 KLHL25Q9H0H3 589 aa14.47□□□□□ -0.09
SPG7-210ENST00000564409 FAM60AQ9NP50 221 aa14.47□□□□□ -0.09
SPG7-210ENST00000564409 SPHK1Q9NYA1 384 aa14.47□□□□□ -0.09
SPG7-210ENST00000564409 GPN3Q9UHW5 284 aaPredicted RBP14.47□□□□□ -0.09
SPG7-210ENST00000564409 CDYLQ9Y232 598 aa14.47□□□□□ -0.09
SPG7-210ENST00000564409 CLEC18AA5D8T8 446 aa14.46□□□□□ -0.09
SPG7-210ENST00000564409 PFDN6O15212 129 aa14.46□□□□□ -0.09
SPG7-210ENST00000564409 ZSCAN9O15535 394 aaPredicted RBP14.46□□□□□ -0.09
SPG7-210ENST00000564409 DPM1O60762 260 aa14.46□□□□□ -0.09
SPG7-210ENST00000564409 S1PR4O95977 384 aa14.46□□□□□ -0.09
SPG7-210ENST00000564409 CCDC175P0C221 793 aa14.46□□□□□ -0.09
SPG7-210ENST00000564409 RPS3P23396 243 aaKnown RBP eCLIP14.46□□□□□ -0.09
SPG7-210ENST00000564409 PKLRP30613 574 aa14.46□□□□□ -0.09
SPG7-210ENST00000564409 SIX1Q15475 284 aaPredicted RBP14.46□□□□□ -0.09
SPG7-210ENST00000564409 ZIC1Q15915 447 aa14.46□□□□□ -0.09
SPG7-210ENST00000564409 PTCHD3Q3KNS1 767 aa14.46□□□□□ -0.09
SPG7-210ENST00000564409 YOD1Q5VVQ6 348 aaPredicted RBP14.46□□□□□ -0.09
SPG7-210ENST00000564409 CPZQ66K79 652 aa14.46□□□□□ -0.09
SPG7-210ENST00000564409 PTRHD1Q6GMV3 140 aaKnown RBP14.46□□□□□ -0.09
SPG7-210ENST00000564409 CLEC18BQ6UXF7 455 aa14.46□□□□□ -0.09
SPG7-210ENST00000564409 DNAJC22Q8N4W6 341 aa14.46□□□□□ -0.09
SPG7-210ENST00000564409 CLEC18CQ8NCF0 446 aa14.46□□□□□ -0.09
SPG7-210ENST00000564409 TRIM58Q8NG06 486 aa14.46□□□□□ -0.09
SPG7-210ENST00000564409 DLG3Q92796 817 aa14.46□□□□□ -0.09
SPG7-210ENST00000564409 NACC2Q96BF6 587 aa14.46□□□□□ -0.09
SPG7-210ENST00000564409 NRTNQ99748 197 aa14.46□□□□□ -0.09
SPG7-210ENST00000564409 NDC1Q9BTX1 674 aa14.46□□□□□ -0.09
SPG7-210ENST00000564409 MRM3Q9HC36 420 aaKnown RBP14.46□□□□□ -0.09
SPG7-210ENST00000564409 CHRAC1Q9NRG0 131 aa14.46□□□□□ -0.09
SPG7-210ENST00000564409 ENAMQ9NRM1 1142 aa14.46□□□□□ -0.09
SPG7-210ENST00000564409 TREX1Q9NSU2 369 aa14.46□□□□□ -0.09
SPG7-210ENST00000564409 TXLNGQ9NUQ3 528 aa14.46□□□□□ -0.09
SPG7-210ENST00000564409 GNPTGQ9UJJ9 305 aa14.46□□□□□ -0.09
SPG7-210ENST00000564409 KLF7O75840 302 aaPredicted RBP14.45□□□□□ -0.1
SPG7-210ENST00000564409 PDGFAP04085 211 aa14.45□□□□□ -0.1
SPG7-210ENST00000564409 PIM1P11309 404 aaPredicted RBP14.45□□□□□ -0.1
SPG7-210ENST00000564409 ETS1P14921 441 aa14.45□□□□□ -0.1
SPG7-210ENST00000564409 CD9P21926 228 aa14.45□□□□□ -0.1
SPG7-210ENST00000564409 ARSFP54793 590 aa14.45□□□□□ -0.1
SPG7-210ENST00000564409 ZC3H12BQ5HYM0 836 aaKnown RBP14.45□□□□□ -0.1
SPG7-210ENST00000564409 RNF187Q5TA31 235 aaPredicted RBP14.45□□□□□ -0.1
SPG7-210ENST00000564409 MRNIPQ6NTE8 343 aa14.45□□□□□ -0.1
SPG7-210ENST00000564409 NAPRTQ6XQN6 538 aa14.45□□□□□ -0.1
SPG7-210ENST00000564409 MICALCLQ6ZW33 695 aa14.45□□□□□ -0.1
SPG7-210ENST00000564409 GSTA5Q7RTV2 222 aa14.45□□□□□ -0.1
SPG7-210ENST00000564409 TRIM73Q86UV7 250 aa14.45□□□□□ -0.1
SPG7-210ENST00000564409 RAB42Q8N4Z0 105 aa14.45□□□□□ -0.1
SPG7-210ENST00000564409 ZBTB2Q8N680 514 aa14.45□□□□□ -0.1
SPG7-210ENST00000564409 EFCAB3Q8N7B9 438 aa14.45□□□□□ -0.1
SPG7-210ENST00000564409 OR2L8Q8NGY9 312 aa14.45□□□□□ -0.1
SPG7-210ENST00000564409 MAGEC3Q8TD91 643 aa14.45□□□□□ -0.1
SPG7-210ENST00000564409 ZUFSPQ96AP4 578 aa14.45□□□□□ -0.1
SPG7-210ENST00000564409 RAD51AP1Q96B01 352 aa14.45□□□□□ -0.1
SPG7-210ENST00000564409 FER1L6-AS2Q96M78 137 aa14.45□□□□□ -0.1
SPG7-210ENST00000564409 GBP5Q96PP8 586 aa14.45□□□□□ -0.1
SPG7-210ENST00000564409 TCF12Q99081 682 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms