RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 ZCCHC23Q6ZST2 131 aa12.47□□□□□ -0.41
CLK3-214ENST00000564096 FRMD7Q6ZUT3 714 aa12.47□□□□□ -0.41
CLK3-214ENST00000564096 SLC9B2Q86UD5 537 aa12.47□□□□□ -0.41
CLK3-214ENST00000564096 NRROSQ86YC3 692 aa12.47□□□□□ -0.41
CLK3-214ENST00000564096 HOMEZQ8IX15 550 aa12.47□□□□□ -0.41
CLK3-214ENST00000564096 SYTL1Q8IYJ3 562 aa12.47□□□□□ -0.41
CLK3-214ENST00000564096 FAM46DQ8NEK8 389 aa12.47□□□□□ -0.41
CLK3-214ENST00000564096 MAPK15Q8TD08 544 aa12.47□□□□□ -0.41
CLK3-214ENST00000564096 ZDHHC1Q8WTX9 485 aa12.47□□□□□ -0.41
CLK3-214ENST00000564096 CNDP1Q96KN2 507 aa12.47□□□□□ -0.41
CLK3-214ENST00000564096 PKP4Q99569 1192 aa12.47□□□□□ -0.41
CLK3-214ENST00000564096 GATA5Q9BWX5 397 aaPredicted RBP12.47□□□□□ -0.41
CLK3-214ENST00000564096 NUSAP1Q9BXS6 441 aaKnown RBP12.47□□□□□ -0.41
CLK3-214ENST00000564096 IRF2BPLQ9H1B7 796 aa12.47□□□□□ -0.41
CLK3-214ENST00000564096 KIR3DX1Q9H7L2 352 aa12.47□□□□□ -0.41
CLK3-214ENST00000564096 TMEM74BQ9NUR3 256 aa12.47□□□□□ -0.41
CLK3-214ENST00000564096 STOX2Q9P2F5 926 aaPredicted RBP12.47□□□□□ -0.41
CLK3-214ENST00000564096 RAPGEFL1Q9UHV5 662 aa12.47□□□□□ -0.41
CLK3-214ENST00000564096 PTBP2Q9UKA9 531 aaKnown RBP12.47□□□□□ -0.41
CLK3-214ENST00000564096 SLC6A14Q9UN76 642 aa12.47□□□□□ -0.41
CLK3-214ENST00000564096 SNX11Q9Y5W9 270 aa12.47□□□□□ -0.41
CLK3-214ENST00000564096 CFAP20Q9Y6A4 193 aaKnown RBP12.47□□□□□ -0.41
CLK3-214ENST00000564096 CSNK1G3Q9Y6M4 447 aa12.47□□□□□ -0.41
CLK3-214ENST00000564096 CACNA1IQ9P0X4 2223 aa12.47□□□□□ -0.41
CLK3-214ENST00000564096 PIKFYVEQ9Y2I7 2098 aa12.47□□□□□ -0.41
CLK3-214ENST00000564096 CCNT2O60583 730 aaKnown RBP12.46□□□□□ -0.41
CLK3-214ENST00000564096 SLC16A8O95907 504 aa12.46□□□□□ -0.41
CLK3-214ENST00000564096 VIPP01282 170 aa12.46□□□□□ -0.41
CLK3-214ENST00000564096 IMPA1P29218 277 aa12.46□□□□□ -0.41
CLK3-214ENST00000564096 EPHA8P29322 1005 aaPredicted RBP12.46□□□□□ -0.41
CLK3-214ENST00000564096 SHMT2P34897 504 aa12.46□□□□□ -0.41
CLK3-214ENST00000564096 GGT5P36269 586 aa12.46□□□□□ -0.41
CLK3-214ENST00000564096 ARL1P40616 181 aaPredicted RBP12.46□□□□□ -0.41
CLK3-214ENST00000564096 RXRGP48443 463 aa12.46□□□□□ -0.41
CLK3-214ENST00000564096 SLC1A6P48664 564 aa12.46□□□□□ -0.41
CLK3-214ENST00000564096 HSPA7P48741 367 aa12.46□□□□□ -0.41
CLK3-214ENST00000564096 RAB28P51157 221 aa12.46□□□□□ -0.41
CLK3-214ENST00000564096 PNLIPRP1P54315 467 aa12.46□□□□□ -0.41
CLK3-214ENST00000564096 C1orf61Q13536 156 aa12.46□□□□□ -0.41
CLK3-214ENST00000564096 CLCA4Q14CN2 919 aa12.46□□□□□ -0.41
CLK3-214ENST00000564096 PLCL1Q15111 1095 aa12.46□□□□□ -0.41
CLK3-214ENST00000564096 LPAL2Q16609 132 aa12.46□□□□□ -0.41
CLK3-214ENST00000564096 ZNF423Q2M1K9 1284 aa12.46□□□□□ -0.41
CLK3-214ENST00000564096 CAPN13Q6MZZ7 669 aaPredicted RBP12.46□□□□□ -0.41
CLK3-214ENST00000564096 IYDQ6PHW0 289 aa12.46□□□□□ -0.41
CLK3-214ENST00000564096 SLC23A3Q6PIS1 610 aa12.46□□□□□ -0.41
CLK3-214ENST00000564096 AGTRAPQ6RW13 159 aa12.46□□□□□ -0.41
CLK3-214ENST00000564096 MBOAT1Q6ZNC8 495 aa12.46□□□□□ -0.41
CLK3-214ENST00000564096 CRLF3Q8IUI8 442 aa12.46□□□□□ -0.41
CLK3-214ENST00000564096 ZFPM2Q8WW38 1151 aa12.46□□□□□ -0.41
CLK3-214ENST00000564096 FAM122AQ96E09 287 aa12.46□□□□□ -0.41
CLK3-214ENST00000564096 MED8Q96G25 268 aa12.46□□□□□ -0.41
CLK3-214ENST00000564096 MAGEB10Q96LZ2 347 aaPredicted RBP12.46□□□□□ -0.41
CLK3-214ENST00000564096 C7orf26Q96N11 449 aa12.46□□□□□ -0.41
CLK3-214ENST00000564096 TMEM79Q9BSE2 394 aa12.46□□□□□ -0.41
CLK3-214ENST00000564096 CD244Q9BZW8 370 aa12.46□□□□□ -0.41
CLK3-214ENST00000564096 DRC3Q9H069 523 aa12.46□□□□□ -0.41
CLK3-214ENST00000564096 CCDC177Q9NQR7 707 aaPredicted RBP12.46□□□□□ -0.41
CLK3-214ENST00000564096 DNAJC11Q9NVH1 559 aa12.46□□□□□ -0.41
CLK3-214ENST00000564096 GMEB2Q9UKD1 530 aa12.46□□□□□ -0.41
CLK3-214ENST00000564096 PCTPQ9UKL6 214 aa12.46□□□□□ -0.41
CLK3-214ENST00000564096 ST14Q9Y5Y6 855 aa12.46□□□□□ -0.41
CLK3-214ENST00000564096 A0A1B0GTQ1 180 aa12.45□□□□□ -0.42
CLK3-214ENST00000564096 K7EPI3 171 aa12.45□□□□□ -0.42
CLK3-214ENST00000564096 SDC3O75056 442 aa12.45□□□□□ -0.42
CLK3-214ENST00000564096 SNNO75324 88 aaPredicted RBP12.45□□□□□ -0.42
CLK3-214ENST00000564096 CRCPO75575 148 aa12.45□□□□□ -0.42
CLK3-214ENST00000564096 WDR47O94967 919 aa12.45□□□□□ -0.42
CLK3-214ENST00000564096 SIX3O95343 332 aaPredicted RBP12.45□□□□□ -0.42
CLK3-214ENST00000564096 OTCP00480 354 aa12.45□□□□□ -0.42
CLK3-214ENST00000564096 CELA2BP08218 269 aaPredicted RBP12.45□□□□□ -0.42
CLK3-214ENST00000564096 TROVE2P10155 538 aaKnown RBP eCLIP12.45□□□□□ -0.42
CLK3-214ENST00000564096 EPB42P16452 691 aa12.45□□□□□ -0.42
CLK3-214ENST00000564096 XRCC1P18887 633 aaPredicted RBP12.45□□□□□ -0.42
CLK3-214ENST00000564096 PKLRP30613 574 aa12.45□□□□□ -0.42
CLK3-214ENST00000564096 SLC6A12P48065 614 aa12.45□□□□□ -0.42
CLK3-214ENST00000564096 HK2P52789 917 aa12.45□□□□□ -0.42
CLK3-214ENST00000564096 ATXN3P54252 364 aaPredicted RBP12.45□□□□□ -0.42
CLK3-214ENST00000564096 TBPL1P62380 186 aa12.45□□□□□ -0.42
CLK3-214ENST00000564096 GALNT1Q10472 559 aaPredicted RBP12.45□□□□□ -0.42
CLK3-214ENST00000564096 PRKAA1Q13131 559 aa12.45□□□□□ -0.42
CLK3-214ENST00000564096 RBBP7Q16576 425 aa12.45□□□□□ -0.42
CLK3-214ENST00000564096 INAVAQ3KP66 663 aa12.45□□□□□ -0.42
CLK3-214ENST00000564096 FAM47EQ6ZV65 393 aa12.45□□□□□ -0.42
CLK3-214ENST00000564096 SFRP1Q8N474 314 aa12.45□□□□□ -0.42
CLK3-214ENST00000564096 SNX31Q8N9S9 440 aa12.45□□□□□ -0.42
CLK3-214ENST00000564096 OR52E1Q8NGJ3 308 aa12.45□□□□□ -0.42
CLK3-214ENST00000564096 OR6Y1Q8NGX8 325 aa12.45□□□□□ -0.42
CLK3-214ENST00000564096 SLC37A2Q8TED4 501 aa12.45□□□□□ -0.42
CLK3-214ENST00000564096 ZNF483Q8TF39 744 aaPredicted RBP12.45□□□□□ -0.42
CLK3-214ENST00000564096 SH3KBP1Q96B97 665 aa12.45□□□□□ -0.42
CLK3-214ENST00000564096 DUSP23Q9BVJ7 150 aa12.45□□□□□ -0.42
CLK3-214ENST00000564096 PITPNM3Q9BZ71 974 aa12.45□□□□□ -0.42
CLK3-214ENST00000564096 PCBD2Q9H0N5 130 aa12.45□□□□□ -0.42
CLK3-214ENST00000564096 SLC32A1Q9H598 525 aa12.45□□□□□ -0.42
CLK3-214ENST00000564096 CAPN10Q9HC96 672 aa12.45□□□□□ -0.42
CLK3-214ENST00000564096 SCHIP1Q9P0W5 487 aaPredicted RBP12.45□□□□□ -0.42
CLK3-214ENST00000564096 R4GN57 208 aa12.45□□□□□ -0.42
CLK3-214ENST00000564096 TNRC6BQ9UPQ9 1833 aaKnown RBP12.45□□□□□ -0.42
CLK3-214ENST00000564096 THADAQ6YHU6 1953 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms