RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 KIAA0040Q15053 153 aa18.63■□□□□ 0.57
SMPD3-203ENST00000563226 SUSD1Q6UWL2 747 aa18.63■□□□□ 0.57
SMPD3-203ENST00000563226 CYP2U1Q7Z449 544 aa18.63■□□□□ 0.57
SMPD3-203ENST00000563226 LIX1Q8N485 282 aa18.63■□□□□ 0.57
SMPD3-203ENST00000563226 TMEM159Q96B96 161 aa18.63■□□□□ 0.57
SMPD3-203ENST00000563226 NUS1Q96E22 293 aa18.63■□□□□ 0.57
SMPD3-203ENST00000563226 CCM2Q9BSQ5 444 aa18.63■□□□□ 0.57
SMPD3-203ENST00000563226 THG1LQ9NWX6 298 aaKnown RBP18.63■□□□□ 0.57
SMPD3-203ENST00000563226 OBP2AQ9NY56 170 aa18.63■□□□□ 0.57
SMPD3-203ENST00000563226 USP22Q9UPT9 525 aa18.63■□□□□ 0.57
SMPD3-203ENST00000563226 AP4S1Q9Y587 144 aa18.63■□□□□ 0.57
SMPD3-203ENST00000563226 QSOX1O00391 747 aa18.62■□□□□ 0.57
SMPD3-203ENST00000563226 PEX1O43933 1283 aa18.62■□□□□ 0.57
SMPD3-203ENST00000563226 SEC22BO75396 215 aa18.62■□□□□ 0.57
SMPD3-203ENST00000563226 VARSP26640 1264 aaKnown RBP18.62■□□□□ 0.57
SMPD3-203ENST00000563226 GRIA3P42263 894 aa18.62■□□□□ 0.57
SMPD3-203ENST00000563226 PPP2R2DQ66LE6 453 aa18.62■□□□□ 0.57
SMPD3-203ENST00000563226 TTC23LQ6PF05 361 aa18.62■□□□□ 0.57
SMPD3-203ENST00000563226 PLCD3Q8N3E9 789 aa18.62■□□□□ 0.57
SMPD3-203ENST00000563226 GLMNQ92990 594 aa18.62■□□□□ 0.57
SMPD3-203ENST00000563226 FBXL8Q96CD0 374 aa18.62■□□□□ 0.57
SMPD3-203ENST00000563226 DNAJC11Q9NVH1 559 aa18.62■□□□□ 0.57
SMPD3-203ENST00000563226 TMEM45AQ9NWC5 275 aa18.62■□□□□ 0.57
SMPD3-203ENST00000563226 KRT6AP02538 564 aa18.62■□□□□ 0.57
SMPD3-203ENST00000563226 KRT6BP04259 564 aa18.62■□□□□ 0.57
SMPD3-203ENST00000563226 SOX11P35716 441 aa18.62■□□□□ 0.57
SMPD3-203ENST00000563226 KRT6CP48668 564 aa18.62■□□□□ 0.57
SMPD3-203ENST00000563226 GSK3BP49841 420 aa18.62■□□□□ 0.57
SMPD3-203ENST00000563226 PLIN5Q00G26 463 aa18.62■□□□□ 0.57
SMPD3-203ENST00000563226 ELP6Q0PNE2 266 aa18.62■□□□□ 0.57
SMPD3-203ENST00000563226 RUNX3Q13761 415 aa18.62■□□□□ 0.57
SMPD3-203ENST00000563226 GGTA1PQ4G0N0 100 aa18.62■□□□□ 0.57
SMPD3-203ENST00000563226 ZNF658BQ4V348 819 aaPredicted RBP18.62■□□□□ 0.57
SMPD3-203ENST00000563226 RAET1GQ6H3X3 334 aa18.62■□□□□ 0.57
SMPD3-203ENST00000563226 NANOGP8Q6NSW7 305 aa18.62■□□□□ 0.57
SMPD3-203ENST00000563226 SYCE2Q6PIF2 218 aa18.62■□□□□ 0.57
SMPD3-203ENST00000563226 DLEU7Q6UYE1 221 aa18.62■□□□□ 0.57
SMPD3-203ENST00000563226 NLRP8Q86W28 1048 aa18.62■□□□□ 0.57
SMPD3-203ENST00000563226 IFNEQ86WN2 208 aa18.62■□□□□ 0.57
SMPD3-203ENST00000563226 TICAM1Q8IUC6 712 aa18.62■□□□□ 0.57
SMPD3-203ENST00000563226 RNF175Q8N4F7 328 aa18.62■□□□□ 0.57
SMPD3-203ENST00000563226 CLHC1Q8NHS4 586 aa18.62■□□□□ 0.57
SMPD3-203ENST00000563226 SELENOMQ8WWX9 145 aa18.62■□□□□ 0.57
SMPD3-203ENST00000563226 OR2AG1Q9H205 316 aa18.62■□□□□ 0.57
SMPD3-203ENST00000563226 NANOGQ9H9S0 305 aa18.62■□□□□ 0.57
SMPD3-203ENST00000563226 DZANK1Q9NVP4 752 aa18.62■□□□□ 0.57
SMPD3-203ENST00000563226 EIF3LQ9Y262 564 aaKnown RBP18.62■□□□□ 0.57
SMPD3-203ENST00000563226 LILRB5O75023 590 aa18.61■□□□□ 0.57
SMPD3-203ENST00000563226 FCHO2Q0JRZ9 810 aa18.61■□□□□ 0.57
SMPD3-203ENST00000563226 EGFLAMQ63HQ2 1017 aa18.61■□□□□ 0.57
SMPD3-203ENST00000563226 CACUL1Q86Y37 369 aa18.61■□□□□ 0.57
SMPD3-203ENST00000563226 SPPL2CQ8IUH8 684 aa18.61■□□□□ 0.57
SMPD3-203ENST00000563226 DPP10Q8N608 796 aa18.61■□□□□ 0.57
SMPD3-203ENST00000563226 KRTCAP2Q8N6L1 136 aa18.61■□□□□ 0.57
SMPD3-203ENST00000563226 L3MBTL4Q8NA19 623 aa18.61■□□□□ 0.57
SMPD3-203ENST00000563226 OR2T34Q8NGX1 318 aa18.61■□□□□ 0.57
SMPD3-203ENST00000563226 OR2T3Q8NH03 318 aa18.61■□□□□ 0.57
SMPD3-203ENST00000563226 LRTOMTQ8WZ04 291 aa18.61■□□□□ 0.57
SMPD3-203ENST00000563226 SUSD6Q92537 303 aa18.61■□□□□ 0.57
SMPD3-203ENST00000563226 PPP2R3CQ969Q6 453 aa18.61■□□□□ 0.57
SMPD3-203ENST00000563226 KXD1Q9BQD3 176 aa18.61■□□□□ 0.57
SMPD3-203ENST00000563226 LMAN2LQ9H0V9 348 aa18.61■□□□□ 0.57
SMPD3-203ENST00000563226 PRSS16Q9NQE7 514 aa18.61■□□□□ 0.57
SMPD3-203ENST00000563226 C1orf109Q9NX04 203 aa18.61■□□□□ 0.57
SMPD3-203ENST00000563226 CDH7Q9ULB5 785 aa18.61■□□□□ 0.57
SMPD3-203ENST00000563226 NEUROG3Q9Y4Z2 214 aa18.61■□□□□ 0.57
SMPD3-203ENST00000563226 LZTS3O60299 673 aaPredicted RBP18.61■□□□□ 0.57
SMPD3-203ENST00000563226 EPHX1P07099 455 aa18.61■□□□□ 0.57
SMPD3-203ENST00000563226 CD22P20273 847 aa18.61■□□□□ 0.57
SMPD3-203ENST00000563226 SLC7A1P30825 629 aa18.61■□□□□ 0.57
SMPD3-203ENST00000563226 GPR1P46091 355 aa18.61■□□□□ 0.57
SMPD3-203ENST00000563226 LIPEQ05469 1076 aa18.61■□□□□ 0.57
SMPD3-203ENST00000563226 SELPLGQ14242 412 aa18.61■□□□□ 0.57
SMPD3-203ENST00000563226 XKR5Q6UX68 686 aa18.61■□□□□ 0.57
SMPD3-203ENST00000563226 ERN2Q76MJ5 926 aaKnown RBP18.61■□□□□ 0.57
SMPD3-203ENST00000563226 CPA6Q8N4T0 437 aa18.61■□□□□ 0.57
SMPD3-203ENST00000563226 DUS3LQ96G46 650 aaKnown RBP18.61■□□□□ 0.57
SMPD3-203ENST00000563226 MYADMQ96S97 322 aa18.61■□□□□ 0.57
SMPD3-203ENST00000563226 SEMA6AQ9H2E6 1030 aa18.61■□□□□ 0.57
SMPD3-203ENST00000563226 ALG2Q9H553 416 aa18.61■□□□□ 0.57
SMPD3-203ENST00000563226 ELOVL6Q9H5J4 265 aa18.61■□□□□ 0.57
SMPD3-203ENST00000563226 BATF3Q9NR55 127 aa18.61■□□□□ 0.57
SMPD3-203ENST00000563226 DLGAP4Q9Y2H0 992 aa18.61■□□□□ 0.57
SMPD3-203ENST00000563226 AK5Q9Y6K8 562 aa18.61■□□□□ 0.57
SMPD3-203ENST00000563226 CROCCQ5TZA2 2017 aa18.61■□□□□ 0.57
SMPD3-203ENST00000563226 ARPC2O15144 300 aa18.6■□□□□ 0.57
SMPD3-203ENST00000563226 UBTFL6P0CB48 400 aaPredicted RBP18.6■□□□□ 0.57
SMPD3-203ENST00000563226 MAP4P27816 1152 aaKnown RBP18.6■□□□□ 0.57
SMPD3-203ENST00000563226 P2RY2P41231 377 aa18.6■□□□□ 0.57
SMPD3-203ENST00000563226 HALP42357 657 aa18.6■□□□□ 0.57
SMPD3-203ENST00000563226 MAD2L1Q13257 205 aaPredicted RBP18.6■□□□□ 0.57
SMPD3-203ENST00000563226 SMU1Q2TAY7 513 aa18.6■□□□□ 0.57
SMPD3-203ENST00000563226 USP39Q53GS9 565 aaKnown RBP18.6■□□□□ 0.57
SMPD3-203ENST00000563226 SLC22A15Q8IZD6 547 aa18.6■□□□□ 0.57
SMPD3-203ENST00000563226 CANT1Q8WVQ1 401 aa18.6■□□□□ 0.57
SMPD3-203ENST00000563226 GATA6Q92908 595 aa18.6■□□□□ 0.57
SMPD3-203ENST00000563226 PPP1R16AQ96I34 528 aa18.6■□□□□ 0.57
SMPD3-203ENST00000563226 PPM1MQ96MI6 270 aa18.6■□□□□ 0.57
SMPD3-203ENST00000563226 STOX2Q9P2F5 926 aaPredicted RBP18.6■□□□□ 0.57
SMPD3-203ENST00000563226 THAP10Q9P2Z0 257 aaPredicted RBP18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms