RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 MEP1BQ16820 701 aa6.6□□□□□ -1.35
TSPAN3-209ENST00000560715 ZNF667Q5HYK9 610 aa6.6□□□□□ -1.35
TSPAN3-209ENST00000560715 LDLRAP1Q5SW96 308 aa6.6□□□□□ -1.35
TSPAN3-209ENST00000560715 RSBN1Q5VWQ0 802 aaPredicted RBP6.6□□□□□ -1.35
TSPAN3-209ENST00000560715 CES4AQ5XG92 561 aa6.6□□□□□ -1.35
TSPAN3-209ENST00000560715 C1orf186Q6ZWK4 172 aa6.6□□□□□ -1.35
TSPAN3-209ENST00000560715 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.6□□□□□ -1.35
TSPAN3-209ENST00000560715 CCDC60Q8IWA6 550 aaPredicted RBP6.6□□□□□ -1.35
TSPAN3-209ENST00000560715 FAM217AQ8IXS0 508 aa6.6□□□□□ -1.35
TSPAN3-209ENST00000560715 CERS5Q8N5B7 392 aa6.6□□□□□ -1.35
TSPAN3-209ENST00000560715 SNX31Q8N9S9 440 aa6.6□□□□□ -1.35
TSPAN3-209ENST00000560715 ANKRD53Q8N9V6 530 aa6.6□□□□□ -1.35
TSPAN3-209ENST00000560715 POMGNT2Q8NAT1 580 aa6.6□□□□□ -1.35
TSPAN3-209ENST00000560715 SHCBP1Q8NEM2 672 aa6.6□□□□□ -1.35
TSPAN3-209ENST00000560715 OR13F1Q8NGS4 319 aa6.6□□□□□ -1.35
TSPAN3-209ENST00000560715 TFAP2CQ92754 450 aa6.6□□□□□ -1.35
TSPAN3-209ENST00000560715 SPSB4Q96A44 273 aa6.6□□□□□ -1.35
TSPAN3-209ENST00000560715 SERAC1Q96JX3 654 aa6.6□□□□□ -1.35
TSPAN3-209ENST00000560715 ASPNQ9BXN1 380 aa6.6□□□□□ -1.35
TSPAN3-209ENST00000560715 GON7Q9BXV9 100 aa6.6□□□□□ -1.35
TSPAN3-209ENST00000560715 FGFBP2Q9BYJ0 223 aa6.6□□□□□ -1.35
TSPAN3-209ENST00000560715 GPR88Q9GZN0 384 aa6.6□□□□□ -1.35
TSPAN3-209ENST00000560715 KCNN2Q9H2S1 579 aa6.6□□□□□ -1.35
TSPAN3-209ENST00000560715 NARFLQ9H6Q4 476 aa6.6□□□□□ -1.35
TSPAN3-209ENST00000560715 ACSS3Q9H6R3 686 aa6.6□□□□□ -1.35
TSPAN3-209ENST00000560715 EVA1AQ9H8M9 152 aa6.6□□□□□ -1.35
TSPAN3-209ENST00000560715 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.6□□□□□ -1.35
TSPAN3-209ENST00000560715 DIABLOQ9NR28 239 aa6.6□□□□□ -1.35
TSPAN3-209ENST00000560715 PLA2G3Q9NZ20 509 aa6.6□□□□□ -1.35
TSPAN3-209ENST00000560715 IPO11Q9UI26 975 aaKnown RBP6.6□□□□□ -1.35
TSPAN3-209ENST00000560715 SLCO3A1Q9UIG8 710 aa6.6□□□□□ -1.35
TSPAN3-209ENST00000560715 ZNF229Q9UJW7 825 aa6.6□□□□□ -1.35
TSPAN3-209ENST00000560715 SLX4Q8IY92 1834 aa6.6□□□□□ -1.35
TSPAN3-209ENST00000560715 CCDC187A0A096LP49 1063 aa6.6□□□□□ -1.35
TSPAN3-209ENST00000560715 IGKV6D-41A0A0C4DH26 115 aa6.6□□□□□ -1.35
TSPAN3-209ENST00000560715 GOLGA8JA6NMD2 632 aa6.6□□□□□ -1.35
TSPAN3-209ENST00000560715 OR5K4A6NMS3 321 aa6.6□□□□□ -1.35
TSPAN3-209ENST00000560715 SLC9A3R1O14745 358 aaPredicted RBP6.6□□□□□ -1.35
TSPAN3-209ENST00000560715 LDLRAD4O15165 306 aa6.6□□□□□ -1.35
TSPAN3-209ENST00000560715 DEAF1O75398 565 aaPredicted RBP6.6□□□□□ -1.35
TSPAN3-209ENST00000560715 SYPP08247 313 aa6.6□□□□□ -1.35
TSPAN3-209ENST00000560715 MATN1P21941 496 aa6.6□□□□□ -1.35
TSPAN3-209ENST00000560715 GRK5P34947 590 aa6.6□□□□□ -1.35
TSPAN3-209ENST00000560715 ASPAP45381 313 aa6.6□□□□□ -1.35
TSPAN3-209ENST00000560715 PIK3CGP48736 1102 aa6.6□□□□□ -1.35
TSPAN3-209ENST00000560715 GBX2P52951 348 aaPredicted RBP6.6□□□□□ -1.35
TSPAN3-209ENST00000560715 UFM1P61960 85 aa6.6□□□□□ -1.35
TSPAN3-209ENST00000560715 CD83Q01151 205 aa6.6□□□□□ -1.35
TSPAN3-209ENST00000560715 SMARCB1Q12824 385 aa6.6□□□□□ -1.35
TSPAN3-209ENST00000560715 CAPSQ13938 189 aa6.6□□□□□ -1.35
TSPAN3-209ENST00000560715 FRG1Q14331 258 aaKnown RBP6.6□□□□□ -1.35
TSPAN3-209ENST00000560715 GNA13Q14344 377 aa6.6□□□□□ -1.35
TSPAN3-209ENST00000560715 CHI3L2Q15782 390 aa6.6□□□□□ -1.35
TSPAN3-209ENST00000560715 AASDHQ4L235 1098 aaPredicted RBP6.6□□□□□ -1.35
TSPAN3-209ENST00000560715 PRRT3Q5FWE3 981 aa6.6□□□□□ -1.35
TSPAN3-209ENST00000560715 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.6□□□□□ -1.35
TSPAN3-209ENST00000560715 PHF19Q5T6S3 580 aa6.6□□□□□ -1.35
TSPAN3-209ENST00000560715 PXDC1Q5TGL8 231 aa6.6□□□□□ -1.35
TSPAN3-209ENST00000560715 SHEQ5VZ18 495 aa6.6□□□□□ -1.35
TSPAN3-209ENST00000560715 TPGS2Q68CL5 300 aa6.6□□□□□ -1.35
TSPAN3-209ENST00000560715 KCTD8Q6ZWB6 473 aa6.6□□□□□ -1.35
TSPAN3-209ENST00000560715 GPBP1Q86WP2 473 aa6.6□□□□□ -1.35
TSPAN3-209ENST00000560715 ZNF280BQ86YH2 543 aa6.6□□□□□ -1.35
TSPAN3-209ENST00000560715 SNX29P2Q8IUI4 249 aa6.6□□□□□ -1.35
TSPAN3-209ENST00000560715 PARP8Q8N3A8 854 aa6.6□□□□□ -1.35
TSPAN3-209ENST00000560715 BHLHE22Q8NFJ8 381 aaPredicted RBP6.6□□□□□ -1.35
TSPAN3-209ENST00000560715 PDCD6IPQ8WUM4 868 aaKnown RBP6.6□□□□□ -1.35
TSPAN3-209ENST00000560715 OMA1Q96E52 524 aa6.6□□□□□ -1.35
TSPAN3-209ENST00000560715 AGPAT1Q99943 283 aa6.6□□□□□ -1.35
TSPAN3-209ENST00000560715 SLA2Q9H6Q3 261 aa6.6□□□□□ -1.35
TSPAN3-209ENST00000560715 IARS2Q9NSE4 1012 aaKnown RBP6.6□□□□□ -1.35
TSPAN3-209ENST00000560715 MORF4L1Q9UBU8 362 aa6.6□□□□□ -1.35
TSPAN3-209ENST00000560715 NUP50Q9UKX7 468 aa6.6□□□□□ -1.35
TSPAN3-209ENST00000560715 AP3M1Q9Y2T2 418 aa6.6□□□□□ -1.35
TSPAN3-209ENST00000560715 ACTL7AQ9Y615 435 aa6.6□□□□□ -1.35
TSPAN3-209ENST00000560715 CLUHO75153 1309 aa6.6□□□□□ -1.35
TSPAN3-209ENST00000560715 IQANK1A0A1B0GTG1 560 aa6.59□□□□□ -1.35
TSPAN3-209ENST00000560715 CLRN2A0PK11 232 aa6.59□□□□□ -1.35
TSPAN3-209ENST00000560715 FAM171A2A8MVW0 826 aa6.59□□□□□ -1.35
TSPAN3-209ENST00000560715 H0YIN7 160 aa6.59□□□□□ -1.35
TSPAN3-209ENST00000560715 ALDH1A2O94788 518 aa6.59□□□□□ -1.35
TSPAN3-209ENST00000560715 CPNE6O95741 557 aa6.59□□□□□ -1.35
TSPAN3-209ENST00000560715 ADH5P11766 374 aa6.59□□□□□ -1.35
TSPAN3-209ENST00000560715 LYL1P12980 280 aa6.59□□□□□ -1.35
TSPAN3-209ENST00000560715 XRCC1P18887 633 aaPredicted RBP6.59□□□□□ -1.35
TSPAN3-209ENST00000560715 EPORP19235 508 aa6.59□□□□□ -1.35
TSPAN3-209ENST00000560715 MYF6P23409 242 aa6.59□□□□□ -1.35
TSPAN3-209ENST00000560715 LIG4P49917 911 aa6.59□□□□□ -1.35
TSPAN3-209ENST00000560715 CLCNKBP51801 687 aa6.59□□□□□ -1.35
TSPAN3-209ENST00000560715 EFNA5P52803 228 aa6.59□□□□□ -1.35
TSPAN3-209ENST00000560715 RAD51Q06609 339 aa6.59□□□□□ -1.35
TSPAN3-209ENST00000560715 IKQ13123 557 aaPredicted RBP6.59□□□□□ -1.35
TSPAN3-209ENST00000560715 RAPSNQ13702 412 aa6.59□□□□□ -1.35
TSPAN3-209ENST00000560715 MORF4L2Q15014 288 aa6.59□□□□□ -1.35
TSPAN3-209ENST00000560715 CARTPTQ16568 116 aa6.59□□□□□ -1.35
TSPAN3-209ENST00000560715 LACC1Q8IV20 430 aa6.59□□□□□ -1.35
TSPAN3-209ENST00000560715 CLYBLQ8N0X4 340 aa6.59□□□□□ -1.35
TSPAN3-209ENST00000560715 OR10Z1Q8NGY1 313 aa6.59□□□□□ -1.35
TSPAN3-209ENST00000560715 HASPINQ8TF76 798 aa6.59□□□□□ -1.35
TSPAN3-209ENST00000560715 DUSP19Q8WTR2 217 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms