RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 EIPR1Q53HC9 387 aa13.2□□□□□ -0.3
TRAF3-208ENST00000560371 NAPRTQ6XQN6 538 aa13.2□□□□□ -0.3
TRAF3-208ENST00000560371 PQLC1Q8N2U9 271 aa13.2□□□□□ -0.3
TRAF3-208ENST00000560371 PJA1Q8NG27 643 aa13.2□□□□□ -0.3
TRAF3-208ENST00000560371 FBXL18Q96ME1 805 aa13.2□□□□□ -0.3
TRAF3-208ENST00000560371 NSMCE3Q96MG7 304 aa13.2□□□□□ -0.3
TRAF3-208ENST00000560371 CCM2Q9BSQ5 444 aa13.2□□□□□ -0.3
TRAF3-208ENST00000560371 UBAP1Q9NZ09 502 aa13.2□□□□□ -0.3
TRAF3-208ENST00000560371 C9JVG2 144 aa13.2□□□□□ -0.3
TRAF3-208ENST00000560371 PLIN3O60664 434 aa13.2□□□□□ -0.3
TRAF3-208ENST00000560371 ITGADQ13349 1161 aa13.2□□□□□ -0.3
TRAF3-208ENST00000560371 PRKD1Q15139 912 aaPredicted RBP13.2□□□□□ -0.3
TRAF3-208ENST00000560371 WDR45BQ5MNZ6 344 aa13.2□□□□□ -0.3
TRAF3-208ENST00000560371 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.2□□□□□ -0.3
TRAF3-208ENST00000560371 VWA5B1Q5TIE3 1220 aa13.2□□□□□ -0.3
TRAF3-208ENST00000560371 MBOAT1Q6ZNC8 495 aa13.2□□□□□ -0.3
TRAF3-208ENST00000560371 TPRG1Q6ZUI0 275 aa13.2□□□□□ -0.3
TRAF3-208ENST00000560371 OMA1Q96E52 524 aa13.2□□□□□ -0.3
TRAF3-208ENST00000560371 DSN1Q9H410 356 aa13.2□□□□□ -0.3
TRAF3-208ENST00000560371 SERTAD3Q9UJW9 196 aa13.2□□□□□ -0.3
TRAF3-208ENST00000560371 SEC16AO15027 2179 aa13.2□□□□□ -0.3
TRAF3-208ENST00000560371 SNED1Q8TER0 1413 aa13.2□□□□□ -0.3
TRAF3-208ENST00000560371 CHST10O43529 356 aa13.2□□□□□ -0.3
TRAF3-208ENST00000560371 NPHS1O60500 1241 aa13.2□□□□□ -0.3
TRAF3-208ENST00000560371 GALTP07902 379 aa13.2□□□□□ -0.3
TRAF3-208ENST00000560371 GATMP50440 423 aa13.2□□□□□ -0.3
TRAF3-208ENST00000560371 LIPEQ05469 1076 aa13.2□□□□□ -0.3
TRAF3-208ENST00000560371 HFE2Q6ZVN8 426 aa13.2□□□□□ -0.3
TRAF3-208ENST00000560371 ZNF433Q8N7K0 673 aaPredicted RBP13.2□□□□□ -0.3
TRAF3-208ENST00000560371 A0A0J9YVX5 310 aa13.2□□□□□ -0.3
TRAF3-208ENST00000560371 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.2□□□□□ -0.3
TRAF3-208ENST00000560371 YTHDF3Q7Z739 585 aaKnown RBP13.2□□□□□ -0.3
TRAF3-208ENST00000560371 CLNKQ7Z7G1 428 aa13.2□□□□□ -0.3
TRAF3-208ENST00000560371 PARP8Q8N3A8 854 aa13.2□□□□□ -0.3
TRAF3-208ENST00000560371 TMEM156Q8N614 296 aa13.2□□□□□ -0.3
TRAF3-208ENST00000560371 TFGQ92734 400 aaPredicted RBP13.2□□□□□ -0.3
TRAF3-208ENST00000560371 IGSF21Q96ID5 467 aa13.2□□□□□ -0.3
TRAF3-208ENST00000560371 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.2□□□□□ -0.3
TRAF3-208ENST00000560371 TRIM2Q9C040 744 aa13.2□□□□□ -0.3
TRAF3-208ENST00000560371 CLK4Q9HAZ1 481 aaKnown RBP13.2□□□□□ -0.3
TRAF3-208ENST00000560371 DNAAF2Q9NVR5 837 aaKnown RBP13.2□□□□□ -0.3
TRAF3-208ENST00000560371 VPS29Q9UBQ0 182 aa13.2□□□□□ -0.3
TRAF3-208ENST00000560371 SALL4Q9UJQ4 1053 aa13.2□□□□□ -0.3
TRAF3-208ENST00000560371 LEFTY2O00292 366 aa13.2□□□□□ -0.3
TRAF3-208ENST00000560371 TPD52L2O43399 206 aaKnown RBP13.2□□□□□ -0.3
TRAF3-208ENST00000560371 TCEA3O75764 348 aa13.2□□□□□ -0.3
TRAF3-208ENST00000560371 METTL18O95568 372 aa13.2□□□□□ -0.3
TRAF3-208ENST00000560371 ADH1BP00325 375 aa13.2□□□□□ -0.3
TRAF3-208ENST00000560371 ZNF823P16415 610 aa13.2□□□□□ -0.3
TRAF3-208ENST00000560371 KHKP50053 298 aa13.2□□□□□ -0.3
TRAF3-208ENST00000560371 AP1S2P56377 157 aa13.2□□□□□ -0.3
TRAF3-208ENST00000560371 TSEN15Q8WW01 171 aaKnown RBP13.2□□□□□ -0.3
TRAF3-208ENST00000560371 KLHDC7BQ96G42 594 aa13.2□□□□□ -0.3
TRAF3-208ENST00000560371 GATA5Q9BWX5 397 aaPredicted RBP13.2□□□□□ -0.3
TRAF3-208ENST00000560371 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.2□□□□□ -0.3
TRAF3-208ENST00000560371 OAS3Q9Y6K5 1087 aaKnown RBP13.2□□□□□ -0.3
TRAF3-208ENST00000560371 NUP188Q5SRE5 1749 aa13.2□□□□□ -0.3
TRAF3-208ENST00000560371 RGS20O76081 388 aa13.19□□□□□ -0.3
TRAF3-208ENST00000560371 HAPLN1P10915 354 aaPredicted RBP13.19□□□□□ -0.3
TRAF3-208ENST00000560371 SERINC3Q13530 473 aa13.19□□□□□ -0.3
TRAF3-208ENST00000560371 CCSAPQ6IQ19 270 aaPredicted RBP13.19□□□□□ -0.3
TRAF3-208ENST00000560371 ZNF483Q8TF39 744 aaPredicted RBP13.19□□□□□ -0.3
TRAF3-208ENST00000560371 EFCAB11Q9BUY7 163 aa13.19□□□□□ -0.3
TRAF3-208ENST00000560371 TFB2MQ9H5Q4 396 aaKnown RBP13.19□□□□□ -0.3
TRAF3-208ENST00000560371 KMOO15229 486 aa13.19□□□□□ -0.3
TRAF3-208ENST00000560371 REM1O75628 298 aa13.19□□□□□ -0.3
TRAF3-208ENST00000560371 IQCF3P0C7M6 154 aa13.19□□□□□ -0.3
TRAF3-208ENST00000560371 RIPK1Q13546 671 aa13.19□□□□□ -0.3
TRAF3-208ENST00000560371 AGAP11Q8TF27 550 aa13.19□□□□□ -0.3
TRAF3-208ENST00000560371 C7orf26Q96N11 449 aa13.19□□□□□ -0.3
TRAF3-208ENST00000560371 SERINC1Q9NRX5 453 aa13.19□□□□□ -0.3
TRAF3-208ENST00000560371 HLA-EP13747 358 aa13.19□□□□□ -0.3
TRAF3-208ENST00000560371 PLGLB1Q02325 96 aa13.19□□□□□ -0.3
TRAF3-208ENST00000560371 SMARCD3Q6STE5 483 aa13.19□□□□□ -0.3
TRAF3-208ENST00000560371 B3GNT6Q6ZMB0 384 aa13.19□□□□□ -0.3
TRAF3-208ENST00000560371 NUDT13Q86X67 352 aa13.19□□□□□ -0.3
TRAF3-208ENST00000560371 PGAM4Q8N0Y7 254 aa13.19□□□□□ -0.3
TRAF3-208ENST00000560371 RASGEF1AQ8N9B8 481 aa13.19□□□□□ -0.3
TRAF3-208ENST00000560371 TWNKQ96RR1 684 aa13.19□□□□□ -0.3
TRAF3-208ENST00000560371 KXD1Q9BQD3 176 aa13.19□□□□□ -0.3
TRAF3-208ENST00000560371 SFXN1Q9H9B4 322 aa13.19□□□□□ -0.3
TRAF3-208ENST00000560371 MED31Q9Y3C7 131 aa13.19□□□□□ -0.3
TRAF3-208ENST00000560371 A8MUA0 341 aa13.19□□□□□ -0.3
TRAF3-208ENST00000560371 TULP2O00295 520 aa13.19□□□□□ -0.3
TRAF3-208ENST00000560371 CDC7O00311 574 aa13.19□□□□□ -0.3
TRAF3-208ENST00000560371 IFNA6P05013 189 aa13.19□□□□□ -0.3
TRAF3-208ENST00000560371 RHOP08100 348 aa13.19□□□□□ -0.3
TRAF3-208ENST00000560371 CCR10P46092 362 aa13.19□□□□□ -0.3
TRAF3-208ENST00000560371 HCAR3P49019 387 aa13.19□□□□□ -0.3
TRAF3-208ENST00000560371 RALGPS1Q5JS13 557 aa13.19□□□□□ -0.3
TRAF3-208ENST00000560371 ARHGAP40Q5TG30 622 aa13.19□□□□□ -0.3
TRAF3-208ENST00000560371 OR4E2Q8NGC2 313 aa13.19□□□□□ -0.3
TRAF3-208ENST00000560371 SLC32A1Q9H598 525 aa13.19□□□□□ -0.3
TRAF3-208ENST00000560371 ZCCHC3Q9NUD5 404 aaKnown RBP13.19□□□□□ -0.3
TRAF3-208ENST00000560371 SSNA1O43805 119 aa13.19□□□□□ -0.3
TRAF3-208ENST00000560371 DLDP09622 509 aaKnown RBP13.19□□□□□ -0.3
TRAF3-208ENST00000560371 PSMA1P25786 263 aaKnown RBP13.19□□□□□ -0.3
TRAF3-208ENST00000560371 SMU1Q2TAY7 513 aa13.19□□□□□ -0.3
TRAF3-208ENST00000560371 HKDC1Q2TB90 917 aa13.19□□□□□ -0.3
TRAF3-208ENST00000560371 LRRC66Q68CR7 880 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms