RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 PRDX3P30048 256 aaKnown RBP19.65■□□□□ 0.74
TSPAN3-207ENST00000559494 RAB28P51157 221 aa19.65■□□□□ 0.74
TSPAN3-207ENST00000559494 PMS2P54278 862 aa19.65■□□□□ 0.74
TSPAN3-207ENST00000559494 IL2P60568 153 aa19.65■□□□□ 0.74
TSPAN3-207ENST00000559494 POU4F1Q01851 419 aa19.65■□□□□ 0.74
TSPAN3-207ENST00000559494 PRKAA1Q13131 559 aa19.65■□□□□ 0.74
TSPAN3-207ENST00000559494 FBXO38Q6PIJ6 1188 aa19.65■□□□□ 0.74
TSPAN3-207ENST00000559494 TRMT10CQ7L0Y3 403 aaKnown RBP19.65■□□□□ 0.74
TSPAN3-207ENST00000559494 PRSS42Q7Z5A4 293 aa19.65■□□□□ 0.74
TSPAN3-207ENST00000559494 C2orf73Q8N5S3 287 aaPredicted RBP19.65■□□□□ 0.74
TSPAN3-207ENST00000559494 LINC01555Q8NAE3 123 aa19.65■□□□□ 0.74
TSPAN3-207ENST00000559494 AGBL5Q8NDL9 886 aa19.65■□□□□ 0.74
TSPAN3-207ENST00000559494 MAGEC3Q8TD91 643 aa19.65■□□□□ 0.74
TSPAN3-207ENST00000559494 KLHL6Q8WZ60 621 aa19.65■□□□□ 0.74
TSPAN3-207ENST00000559494 DLG3Q92796 817 aa19.65■□□□□ 0.74
TSPAN3-207ENST00000559494 CMKLR1Q99788 373 aa19.65■□□□□ 0.74
TSPAN3-207ENST00000559494 CAB39LQ9H9S4 337 aa19.65■□□□□ 0.74
TSPAN3-207ENST00000559494 RRAGDQ9NQL2 400 aaPredicted RBP19.65■□□□□ 0.74
TSPAN3-207ENST00000559494 OCIAD1Q9NX40 245 aa19.65■□□□□ 0.74
TSPAN3-207ENST00000559494 ACTR10Q9NZ32 417 aa19.65■□□□□ 0.74
TSPAN3-207ENST00000559494 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.65■□□□□ 0.74
TSPAN3-207ENST00000559494 POMT2Q9UKY4 750 aa19.65■□□□□ 0.74
TSPAN3-207ENST00000559494 PCDHGA8Q9Y5G5 932 aa19.65■□□□□ 0.74
TSPAN3-207ENST00000559494 AK5Q9Y6K8 562 aa19.65■□□□□ 0.74
TSPAN3-207ENST00000559494 V9GYY5 206 aaPredicted RBP19.65■□□□□ 0.74
TSPAN3-207ENST00000559494 PCM1Q15154 2024 aa19.65■□□□□ 0.74
TSPAN3-207ENST00000559494 FREM2Q5SZK8 3169 aa19.64■□□□□ 0.73
TSPAN3-207ENST00000559494 SNRNP200O75643 2136 aaKnown RBP19.64■□□□□ 0.73
TSPAN3-207ENST00000559494 IGHV5-51A0A0C4DH38 117 aa19.64■□□□□ 0.73
TSPAN3-207ENST00000559494 PIPSLA2A3N6 862 aa19.64■□□□□ 0.73
TSPAN3-207ENST00000559494 GSAPA4D1B5 854 aa19.64■□□□□ 0.73
TSPAN3-207ENST00000559494 RASGRF2O14827 1237 aa19.64■□□□□ 0.73
TSPAN3-207ENST00000559494 TOX3O15405 576 aaPredicted RBP19.64■□□□□ 0.73
TSPAN3-207ENST00000559494 RASSF9O75901 435 aa19.64■□□□□ 0.73
TSPAN3-207ENST00000559494 CATP04040 527 aaKnown RBP19.64■□□□□ 0.73
TSPAN3-207ENST00000559494 ANKRD34CP0C6C1 535 aa19.64■□□□□ 0.73
TSPAN3-207ENST00000559494 FGF3P11487 239 aaPredicted RBP19.64■□□□□ 0.73
TSPAN3-207ENST00000559494 ITIH1P19827 911 aa19.64■□□□□ 0.73
TSPAN3-207ENST00000559494 CSTF2P33240 577 aaKnown RBP eCLIP19.64■□□□□ 0.73
TSPAN3-207ENST00000559494 ETV5P41161 510 aa19.64■□□□□ 0.73
TSPAN3-207ENST00000559494 SEPHS1P49903 392 aa19.64■□□□□ 0.73
TSPAN3-207ENST00000559494 USP10Q14694 798 aaKnown RBP19.64■□□□□ 0.73
TSPAN3-207ENST00000559494 LRRC8EQ6NSJ5 796 aa19.64■□□□□ 0.73
TSPAN3-207ENST00000559494 UBE2R2Q712K3 238 aaPredicted RBP19.64■□□□□ 0.73
TSPAN3-207ENST00000559494 FBXO15Q8NCQ5 510 aaPredicted RBP19.64■□□□□ 0.73
TSPAN3-207ENST00000559494 OR9A1PQ8NGU1 263 aa19.64■□□□□ 0.73
TSPAN3-207ENST00000559494 OR2L8Q8NGY9 312 aa19.64■□□□□ 0.73
TSPAN3-207ENST00000559494 FLVCR1-AS1Q8TAF5 88 aa19.64■□□□□ 0.73
TSPAN3-207ENST00000559494 MDM1Q8TC05 714 aa19.64■□□□□ 0.73
TSPAN3-207ENST00000559494 DENND1AQ8TEH3 1009 aa19.64■□□□□ 0.73
TSPAN3-207ENST00000559494 NXPE2Q96DL1 559 aa19.64■□□□□ 0.73
TSPAN3-207ENST00000559494 PDLIM5Q96HC4 596 aaKnown RBP19.64■□□□□ 0.73
TSPAN3-207ENST00000559494 CD180Q99467 661 aa19.64■□□□□ 0.73
TSPAN3-207ENST00000559494 PKP4Q99569 1192 aa19.64■□□□□ 0.73
TSPAN3-207ENST00000559494 ZNF768Q9H5H4 540 aaKnown RBP19.64■□□□□ 0.73
TSPAN3-207ENST00000559494 AKAP7Q9P0M2 348 aaPredicted RBP19.64■□□□□ 0.73
TSPAN3-207ENST00000559494 ADAMTS6Q9UKP5 1117 aa19.64■□□□□ 0.73
TSPAN3-207ENST00000559494 C2orf74A8MZ97 194 aa19.63■□□□□ 0.73
TSPAN3-207ENST00000559494 MYO1CO00159 1063 aa19.63■□□□□ 0.73
TSPAN3-207ENST00000559494 MATN2O00339 956 aa19.63■□□□□ 0.73
TSPAN3-207ENST00000559494 RIPK2O43353 540 aa19.63■□□□□ 0.73
TSPAN3-207ENST00000559494 ZBTB14O43829 449 aa19.63■□□□□ 0.73
TSPAN3-207ENST00000559494 WISP3O95389 354 aaPredicted RBP19.63■□□□□ 0.73
TSPAN3-207ENST00000559494 ITGA2BP08514 1039 aa19.63■□□□□ 0.73
TSPAN3-207ENST00000559494 ZNF37AP17032 561 aaPredicted RBP19.63■□□□□ 0.73
TSPAN3-207ENST00000559494 PEBP1P30086 187 aaKnown RBP19.63■□□□□ 0.73
TSPAN3-207ENST00000559494 VSNL1P62760 191 aa19.63■□□□□ 0.73
TSPAN3-207ENST00000559494 UNQ6494/PRO21346Q6UXR6 183 aa19.63■□□□□ 0.73
TSPAN3-207ENST00000559494 MYO1HQ8N1T3 1032 aa19.63■□□□□ 0.73
TSPAN3-207ENST00000559494 ANKRD49Q8WVL7 239 aa19.63■□□□□ 0.73
TSPAN3-207ENST00000559494 SLC46A1Q96NT5 459 aa19.63■□□□□ 0.73
TSPAN3-207ENST00000559494 OR2A14Q96R47 310 aa19.63■□□□□ 0.73
TSPAN3-207ENST00000559494 EPB41L4BQ9H329 900 aa19.63■□□□□ 0.73
TSPAN3-207ENST00000559494 POPDC3Q9HBV1 291 aa19.63■□□□□ 0.73
TSPAN3-207ENST00000559494 PISDQ9UG56 409 aa19.63■□□□□ 0.73
TSPAN3-207ENST00000559494 IKZF3Q9UKT9 509 aa19.63■□□□□ 0.73
TSPAN3-207ENST00000559494 AHCTF1Q8WYP5 2266 aa19.62■□□□□ 0.73
TSPAN3-207ENST00000559494 A0A087WUV0 522 aaPredicted RBP19.62■□□□□ 0.73
TSPAN3-207ENST00000559494 HMX2A2RU54 273 aa19.62■□□□□ 0.73
TSPAN3-207ENST00000559494 TLCD2A6NGC4 264 aa19.62■□□□□ 0.73
TSPAN3-207ENST00000559494 EFCAB7A8K855 629 aa19.62■□□□□ 0.73
TSPAN3-207ENST00000559494 BRINP1O60477 761 aa19.62■□□□□ 0.73
TSPAN3-207ENST00000559494 DXOO77932 396 aaKnown RBP19.62■□□□□ 0.73
TSPAN3-207ENST00000559494 TNFSF15O95150 251 aa19.62■□□□□ 0.73
TSPAN3-207ENST00000559494 ABHD2P08910 425 aa19.62■□□□□ 0.73
TSPAN3-207ENST00000559494 JMJD7P0C870 316 aa19.62■□□□□ 0.73
TSPAN3-207ENST00000559494 SLC12A2P55011 1212 aa19.62■□□□□ 0.73
TSPAN3-207ENST00000559494 ERCC6LQ2NKX8 1250 aa19.62■□□□□ 0.73
TSPAN3-207ENST00000559494 NKAPQ8N5F7 415 aaKnown RBP19.62■□□□□ 0.73
TSPAN3-207ENST00000559494 BMPERQ8N8U9 685 aa19.62■□□□□ 0.73
TSPAN3-207ENST00000559494 SLC44A1Q8WWI5 657 aa19.62■□□□□ 0.73
TSPAN3-207ENST00000559494 UBXN4Q92575 508 aa19.62■□□□□ 0.73
TSPAN3-207ENST00000559494 SLC12A9Q9BXP2 914 aa19.62■□□□□ 0.73
TSPAN3-207ENST00000559494 SYTL2Q9HCH5 934 aa19.62■□□□□ 0.73
TSPAN3-207ENST00000559494 GPAMQ9HCL2 828 aa19.62■□□□□ 0.73
TSPAN3-207ENST00000559494 ASCL3Q9NQ33 180 aa19.62■□□□□ 0.73
TSPAN3-207ENST00000559494 C1GALT1Q9NS00 363 aa19.62■□□□□ 0.73
TSPAN3-207ENST00000559494 PDE10AQ9Y233 779 aa19.62■□□□□ 0.73
TSPAN3-207ENST00000559494 ASPMQ8IZT6 3477 aa19.62■□□□□ 0.73
TSPAN3-207ENST00000559494 URB1O60287 2271 aaKnown RBP19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms