RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 VPS9D1Q9Y2B5 631 aa12.18□□□□□ -0.46
LRRC28-214ENST00000559433 CRYL1Q9Y2S2 319 aa12.18□□□□□ -0.46
LRRC28-214ENST00000559433 MRPS18BQ9Y676 258 aaKnown RBP12.18□□□□□ -0.46
LRRC28-214ENST00000559433 COL6A6A6NMZ7 2263 aa12.17□□□□□ -0.46
LRRC28-214ENST00000559433 CTAGE9A4FU28 777 aa12.17□□□□□ -0.46
LRRC28-214ENST00000559433 ISM1B1AKI9 464 aa12.17□□□□□ -0.46
LRRC28-214ENST00000559433 H3BMM5 538 aa12.17□□□□□ -0.46
LRRC28-214ENST00000559433 NIPSNAP2O75323 286 aa12.17□□□□□ -0.46
LRRC28-214ENST00000559433 ESR1P03372 595 aa12.17□□□□□ -0.46
LRRC28-214ENST00000559433 F8A1P23610 371 aa12.17□□□□□ -0.46
LRRC28-214ENST00000559433 MAGEA3P43357 314 aa12.17□□□□□ -0.46
LRRC28-214ENST00000559433 RAB28P51157 221 aa12.17□□□□□ -0.46
LRRC28-214ENST00000559433 RPS15P62841 145 aaKnown RBP12.17□□□□□ -0.46
LRRC28-214ENST00000559433 KYNUQ16719 465 aa12.17□□□□□ -0.46
LRRC28-214ENST00000559433 LONRF1Q17RB8 773 aa12.17□□□□□ -0.46
LRRC28-214ENST00000559433 DEFB109BQ30KR1 87 aa12.17□□□□□ -0.46
LRRC28-214ENST00000559433 PLEKHS1Q5SXH7 462 aa12.17□□□□□ -0.46
LRRC28-214ENST00000559433 PAPD7Q5XG87 772 aaKnown RBP12.17□□□□□ -0.46
LRRC28-214ENST00000559433 TTC23LQ6PF05 361 aa12.17□□□□□ -0.46
LRRC28-214ENST00000559433 CENPUQ71F23 418 aa12.17□□□□□ -0.46
LRRC28-214ENST00000559433 KLHL7Q8IXQ5 586 aa12.17□□□□□ -0.46
LRRC28-214ENST00000559433 AGGF1Q8N302 714 aaeCLIP12.17□□□□□ -0.46
LRRC28-214ENST00000559433 C19orf47Q8N9M1 422 aaKnown RBP12.17□□□□□ -0.46
LRRC28-214ENST00000559433 CT55Q8WUE5 264 aa12.17□□□□□ -0.46
LRRC28-214ENST00000559433 APOBEC4Q8WW27 367 aaKnown RBP12.17□□□□□ -0.46
LRRC28-214ENST00000559433 SLCO2A1Q92959 643 aa12.17□□□□□ -0.46
LRRC28-214ENST00000559433 OR2A14Q96R47 310 aa12.17□□□□□ -0.46
LRRC28-214ENST00000559433 SYTL2Q9HCH5 934 aa12.17□□□□□ -0.46
LRRC28-214ENST00000559433 LHX9Q9NQ69 397 aa12.17□□□□□ -0.46
LRRC28-214ENST00000559433 LATS2Q9NRM7 1088 aa12.17□□□□□ -0.46
LRRC28-214ENST00000559433 INTS10Q9NVR2 710 aaKnown RBP12.17□□□□□ -0.46
LRRC28-214ENST00000559433 PCYOX1Q9UHG3 505 aa12.17□□□□□ -0.46
LRRC28-214ENST00000559433 TSR3Q9UJK0 312 aaKnown RBP12.17□□□□□ -0.46
LRRC28-214ENST00000559433 SAR1BQ9Y6B6 198 aa12.17□□□□□ -0.46
LRRC28-214ENST00000559433 CFAP46Q8IYW2 2715 aa12.17□□□□□ -0.46
LRRC28-214ENST00000559433 A0A0J9YY10 115 aa12.16□□□□□ -0.46
LRRC28-214ENST00000559433 ZCWPW2A0A1B0GU75 182 aa12.16□□□□□ -0.46
LRRC28-214ENST00000559433 C21orf140B9A014 251 aa12.16□□□□□ -0.46
LRRC28-214ENST00000559433 E5RI56 91 aa12.16□□□□□ -0.46
LRRC28-214ENST00000559433 DNALI1O14645 258 aaPredicted RBP12.16□□□□□ -0.46
LRRC28-214ENST00000559433 TERTO14746 1132 aaKnown RBP12.16□□□□□ -0.46
LRRC28-214ENST00000559433 USP1O94782 785 aa12.16□□□□□ -0.46
LRRC28-214ENST00000559433 F7P08709 466 aaPredicted RBP12.16□□□□□ -0.46
LRRC28-214ENST00000559433 CHRM3P20309 590 aa12.16□□□□□ -0.46
LRRC28-214ENST00000559433 CYP2A7P20853 494 aa12.16□□□□□ -0.46
LRRC28-214ENST00000559433 BDKRB1P46663 353 aa12.16□□□□□ -0.46
LRRC28-214ENST00000559433 ADARP55265 1226 aaKnown RBP12.16□□□□□ -0.46
LRRC28-214ENST00000559433 DNASE1L3Q13609 305 aa12.16□□□□□ -0.46
LRRC28-214ENST00000559433 ERV3-1Q14264 604 aa12.16□□□□□ -0.46
LRRC28-214ENST00000559433 KIR2DS3Q14952 304 aa12.16□□□□□ -0.46
LRRC28-214ENST00000559433 SLC5A12Q1EHB4 618 aa12.16□□□□□ -0.46
LRRC28-214ENST00000559433 PRAMEF17Q5VTA0 474 aa12.16□□□□□ -0.46
LRRC28-214ENST00000559433 IZUMO3Q5VZ72 239 aa12.16□□□□□ -0.46
LRRC28-214ENST00000559433 CNSTQ6PJW8 725 aa12.16□□□□□ -0.46
LRRC28-214ENST00000559433 CDHR3Q6ZTQ4 885 aa12.16□□□□□ -0.46
LRRC28-214ENST00000559433 PRICKLE2Q7Z3G6 844 aa12.16□□□□□ -0.46
LRRC28-214ENST00000559433 PCGF5Q86SE9 256 aa12.16□□□□□ -0.46
LRRC28-214ENST00000559433 TMEM135Q86UB9 458 aa12.16□□□□□ -0.46
LRRC28-214ENST00000559433 TAX1BP1Q86VP1 789 aa12.16□□□□□ -0.46
LRRC28-214ENST00000559433 CREG2Q8IUH2 290 aa12.16□□□□□ -0.46
LRRC28-214ENST00000559433 DENND6AQ8IWF6 608 aa12.16□□□□□ -0.46
LRRC28-214ENST00000559433 ZBTB2Q8N680 514 aa12.16□□□□□ -0.46
LRRC28-214ENST00000559433 OR1L3Q8NH93 324 aa12.16□□□□□ -0.46
LRRC28-214ENST00000559433 FLVCR1-AS1Q8TAF5 88 aa12.16□□□□□ -0.46
LRRC28-214ENST00000559433 MR1Q95460 341 aa12.16□□□□□ -0.46
LRRC28-214ENST00000559433 CLIP3Q96DZ5 547 aa12.16□□□□□ -0.46
LRRC28-214ENST00000559433 TCTN2Q96GX1 697 aa12.16□□□□□ -0.46
LRRC28-214ENST00000559433 SIGLEC10Q96LC7 697 aa12.16□□□□□ -0.46
LRRC28-214ENST00000559433 FOPNLQ96NB1 174 aa12.16□□□□□ -0.46
LRRC28-214ENST00000559433 IL17FQ96PD4 163 aa12.16□□□□□ -0.46
LRRC28-214ENST00000559433 TWSG1Q9GZX9 223 aa12.16□□□□□ -0.46
LRRC28-214ENST00000559433 ADNPQ9H2P0 1102 aa12.16□□□□□ -0.46
LRRC28-214ENST00000559433 C20orf96Q9NUD7 363 aaPredicted RBP12.16□□□□□ -0.46
LRRC28-214ENST00000559433 GEMIN8Q9NWZ8 242 aaKnown RBP12.16□□□□□ -0.46
LRRC28-214ENST00000559433 SLC39A10Q9ULF5 831 aa12.16□□□□□ -0.46
LRRC28-214ENST00000559433 RUVBL2Q9Y230 463 aaKnown RBP12.16□□□□□ -0.46
LRRC28-214ENST00000559433 MRFAP1Q9Y605 127 aa12.16□□□□□ -0.46
LRRC28-214ENST00000559433 NFS1Q9Y697 457 aa12.16□□□□□ -0.46
LRRC28-214ENST00000559433 BAHCC1Q9P281 2608 aa12.16□□□□□ -0.46
LRRC28-214ENST00000559433 RASGRF2O14827 1237 aa12.15□□□□□ -0.46
LRRC28-214ENST00000559433 SLC28A2O43868 658 aa12.15□□□□□ -0.46
LRRC28-214ENST00000559433 S1PR4O95977 384 aa12.15□□□□□ -0.46
LRRC28-214ENST00000559433 MSL3P1P0C860 447 aa12.15□□□□□ -0.46
LRRC28-214ENST00000559433 PKMP14618 531 aaKnown RBP12.15□□□□□ -0.46
LRRC28-214ENST00000559433 PGAM1P18669 254 aa12.15□□□□□ -0.46
LRRC28-214ENST00000559433 CD9P21926 228 aa12.15□□□□□ -0.46
LRRC28-214ENST00000559433 OAS2P29728 719 aaKnown RBP12.15□□□□□ -0.46
LRRC28-214ENST00000559433 ATP5DP30049 168 aa12.15□□□□□ -0.46
LRRC28-214ENST00000559433 PEBP1P30086 187 aaKnown RBP12.15□□□□□ -0.46
LRRC28-214ENST00000559433 SLC1A2P43004 574 aa12.15□□□□□ -0.46
LRRC28-214ENST00000559433 PTGIRP43119 386 aa12.15□□□□□ -0.46
LRRC28-214ENST00000559433 ITGA1P56199 1179 aa12.15□□□□□ -0.46
LRRC28-214ENST00000559433 POLE2P56282 527 aa12.15□□□□□ -0.46
LRRC28-214ENST00000559433 DR1Q01658 176 aa12.15□□□□□ -0.46
LRRC28-214ENST00000559433 GPS2Q13227 327 aa12.15□□□□□ -0.46
LRRC28-214ENST00000559433 KCNAB2Q13303 367 aa12.15□□□□□ -0.46
LRRC28-214ENST00000559433 CTBP1Q13363 440 aa12.15□□□□□ -0.46
LRRC28-214ENST00000559433 GRB7Q14451 532 aa12.15□□□□□ -0.46
LRRC28-214ENST00000559433 ZNF789Q5FWF6 425 aa12.15□□□□□ -0.46
LRRC28-214ENST00000559433 ATP1A1-AS1Q5TC04 95 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms