RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 KLHL42Q9P2K6 505 aa4.24□□□□□ -1.73
SNX1-205ENST00000559339 ZC3H7BQ9UGR2 993 aaKnown RBP4.24□□□□□ -1.73
SNX1-205ENST00000559339 POMT2Q9UKY4 750 aa4.24□□□□□ -1.73
SNX1-205ENST00000559339 PADI1Q9ULC6 663 aa4.24□□□□□ -1.73
SNX1-205ENST00000559339 TMEM184BQ9Y519 407 aaPredicted RBP4.24□□□□□ -1.73
SNX1-205ENST00000559339 FAM169AQ9Y6X4 670 aa4.24□□□□□ -1.73
SNX1-205ENST00000559339 FAM208BQ5VWN6 2430 aa4.24□□□□□ -1.73
SNX1-205ENST00000559339 DSPP15924 2871 aaKnown RBP4.24□□□□□ -1.73
SNX1-205ENST00000559339 A0A0J9YY10 115 aa4.23□□□□□ -1.73
SNX1-205ENST00000559339 FAM187AA6NFU0 413 aa4.23□□□□□ -1.73
SNX1-205ENST00000559339 SLC9B1P1A6NJY1 282 aa4.23□□□□□ -1.73
SNX1-205ENST00000559339 ZNF891A8MT65 544 aaPredicted RBP4.23□□□□□ -1.73
SNX1-205ENST00000559339 C21orf140B9A014 251 aa4.23□□□□□ -1.73
SNX1-205ENST00000559339 TMEM150CB9EJG8 249 aa4.23□□□□□ -1.73
SNX1-205ENST00000559339 E7EQ34 232 aa4.23□□□□□ -1.73
SNX1-205ENST00000559339 KIF2AO00139 706 aaPredicted RBP4.23□□□□□ -1.73
SNX1-205ENST00000559339 BTN3A3O00478 584 aa4.23□□□□□ -1.73
SNX1-205ENST00000559339 RASGRF2O14827 1237 aa4.23□□□□□ -1.73
SNX1-205ENST00000559339 EFSO43281 561 aa4.23□□□□□ -1.73
SNX1-205ENST00000559339 ZBTB14O43829 449 aa4.23□□□□□ -1.73
SNX1-205ENST00000559339 CPNE3O75131 537 aaKnown RBP4.23□□□□□ -1.73
SNX1-205ENST00000559339 NIPSNAP2O75323 286 aa4.23□□□□□ -1.73
SNX1-205ENST00000559339 SPAG6O75602 509 aa4.23□□□□□ -1.73
SNX1-205ENST00000559339 SCRG1O75711 98 aa4.23□□□□□ -1.73
SNX1-205ENST00000559339 SEC31AO94979 1220 aaKnown RBP4.23□□□□□ -1.73
SNX1-205ENST00000559339 FKBP9O95302 570 aa4.23□□□□□ -1.73
SNX1-205ENST00000559339 C1orf105O95561 183 aa4.23□□□□□ -1.73
SNX1-205ENST00000559339 CATP04040 527 aaKnown RBP4.23□□□□□ -1.73
SNX1-205ENST00000559339 CHRM5P08912 532 aaPredicted RBP4.23□□□□□ -1.73
SNX1-205ENST00000559339 CD63P08962 238 aa4.23□□□□□ -1.73
SNX1-205ENST00000559339 HBQ1P09105 142 aa4.23□□□□□ -1.73
SNX1-205ENST00000559339 HIST1H2AGP0C0S8 130 aaPredicted RBP4.23□□□□□ -1.73
SNX1-205ENST00000559339 EBLN1P0CF75 366 aa4.23□□□□□ -1.73
SNX1-205ENST00000559339 CBSLP0DN79 551 aa4.23□□□□□ -1.73
SNX1-205ENST00000559339 PKMP14618 531 aaKnown RBP4.23□□□□□ -1.73
SNX1-205ENST00000559339 LIFP15018 202 aa4.23□□□□□ -1.73
SNX1-205ENST00000559339 TCN2P20062 427 aa4.23□□□□□ -1.73
SNX1-205ENST00000559339 HIST1H2ADP20671 130 aa4.23□□□□□ -1.73
SNX1-205ENST00000559339 AGXTP21549 392 aa4.23□□□□□ -1.73
SNX1-205ENST00000559339 CBSP35520 551 aa4.23□□□□□ -1.73
SNX1-205ENST00000559339 HSD17B2P37059 387 aa4.23□□□□□ -1.73
SNX1-205ENST00000559339 ELK3P41970 407 aa4.23□□□□□ -1.73
SNX1-205ENST00000559339 STAT5AP42229 794 aa4.23□□□□□ -1.73
SNX1-205ENST00000559339 SLC1A2P43004 574 aa4.23□□□□□ -1.73
SNX1-205ENST00000559339 PTGIRP43119 386 aa4.23□□□□□ -1.73
SNX1-205ENST00000559339 RGS4P49798 205 aa4.23□□□□□ -1.73
SNX1-205ENST00000559339 ITGA8P53708 1063 aa4.23□□□□□ -1.73
SNX1-205ENST00000559339 PPP1CAP62136 330 aa4.23□□□□□ -1.73
SNX1-205ENST00000559339 RPS15P62841 145 aaKnown RBP4.23□□□□□ -1.73
SNX1-205ENST00000559339 CAV1Q03135 178 aa4.23□□□□□ -1.73
SNX1-205ENST00000559339 ILF2Q12905 390 aaKnown RBP4.23□□□□□ -1.73
SNX1-205ENST00000559339 KCNAB1Q14722 419 aa4.23□□□□□ -1.73
SNX1-205ENST00000559339 ARHGAP19Q14CB8 494 aa4.23□□□□□ -1.73
SNX1-205ENST00000559339 SF1Q15637 639 aaKnown RBP4.23□□□□□ -1.73
SNX1-205ENST00000559339 SLC5A12Q1EHB4 618 aa4.23□□□□□ -1.73
SNX1-205ENST00000559339 ZC3H12BQ5HYM0 836 aaKnown RBP4.23□□□□□ -1.73
SNX1-205ENST00000559339 CTSL3PQ5NE16 218 aa4.23□□□□□ -1.73
SNX1-205ENST00000559339 PWWP2BQ6NUJ5 590 aa4.23□□□□□ -1.73
SNX1-205ENST00000559339 HIBCHQ6NVY1 386 aaPredicted RBP4.23□□□□□ -1.73
SNX1-205ENST00000559339 CNSTQ6PJW8 725 aa4.23□□□□□ -1.73
SNX1-205ENST00000559339 XKR5Q6UX68 686 aa4.23□□□□□ -1.73
SNX1-205ENST00000559339 NEK10Q6ZWH5 1172 aa4.23□□□□□ -1.73
SNX1-205ENST00000559339 CENPUQ71F23 418 aa4.23□□□□□ -1.73
SNX1-205ENST00000559339 VASH2Q86V25 355 aa4.23□□□□□ -1.73
SNX1-205ENST00000559339 VRK3Q8IV63 474 aa4.23□□□□□ -1.73
SNX1-205ENST00000559339 DENND6AQ8IWF6 608 aa4.23□□□□□ -1.73
SNX1-205ENST00000559339 ADGRF3Q8IZF5 1079 aa4.23□□□□□ -1.73
SNX1-205ENST00000559339 ZBTB2Q8N680 514 aa4.23□□□□□ -1.73
SNX1-205ENST00000559339 C19orf47Q8N9M1 422 aaKnown RBP4.23□□□□□ -1.73
SNX1-205ENST00000559339 C2CD4AQ8NCU7 369 aaPredicted RBP4.23□□□□□ -1.73
SNX1-205ENST00000559339 MNS1Q8NEH6 495 aa4.23□□□□□ -1.73
SNX1-205ENST00000559339 PYROXD1Q8WU10 500 aa4.23□□□□□ -1.73
SNX1-205ENST00000559339 ZNF592Q92610 1267 aa4.23□□□□□ -1.73
SNX1-205ENST00000559339 CDKL2Q92772 493 aa4.23□□□□□ -1.73
SNX1-205ENST00000559339 PMEPA1Q969W9 287 aa4.23□□□□□ -1.73
SNX1-205ENST00000559339 MARVELD3Q96A59 401 aa4.23□□□□□ -1.73
SNX1-205ENST00000559339 ZUFSPQ96AP4 578 aa4.23□□□□□ -1.73
SNX1-205ENST00000559339 CLIP3Q96DZ5 547 aa4.23□□□□□ -1.73
SNX1-205ENST00000559339 CERS2Q96G23 380 aa4.23□□□□□ -1.73
SNX1-205ENST00000559339 WBP1Q96G27 269 aa4.23□□□□□ -1.73
SNX1-205ENST00000559339 VPS39Q96JC1 886 aa4.23□□□□□ -1.73
SNX1-205ENST00000559339 HIST1H2AHQ96KK5 128 aa4.23□□□□□ -1.73
SNX1-205ENST00000559339 SIGLEC10Q96LC7 697 aa4.23□□□□□ -1.73
SNX1-205ENST00000559339 C16orf45Q96MC5 204 aaPredicted RBP4.23□□□□□ -1.73
SNX1-205ENST00000559339 OR2A14Q96R47 310 aa4.23□□□□□ -1.73
SNX1-205ENST00000559339 HIST1H2AJQ99878 128 aa4.23□□□□□ -1.73
SNX1-205ENST00000559339 C17orf62Q9BQA9 187 aa4.23□□□□□ -1.73
SNX1-205ENST00000559339 DPH2Q9BQC3 489 aaPredicted RBP4.23□□□□□ -1.73
SNX1-205ENST00000559339 ERP44Q9BS26 406 aa4.23□□□□□ -1.73
SNX1-205ENST00000559339 H2AFJQ9BTM1 129 aa4.23□□□□□ -1.73
SNX1-205ENST00000559339 GPR87Q9BY21 358 aa4.23□□□□□ -1.73
SNX1-205ENST00000559339 PITPNM3Q9BZ71 974 aa4.23□□□□□ -1.73
SNX1-205ENST00000559339 FAM117AQ9C073 453 aa4.23□□□□□ -1.73
SNX1-205ENST00000559339 CHRNA10Q9GZZ6 450 aa4.23□□□□□ -1.73
SNX1-205ENST00000559339 LHX9Q9NQ69 397 aa4.23□□□□□ -1.73
SNX1-205ENST00000559339 FBXO6Q9NRD1 293 aaPredicted RBP4.23□□□□□ -1.73
SNX1-205ENST00000559339 IARS2Q9NSE4 1012 aaKnown RBP4.23□□□□□ -1.73
SNX1-205ENST00000559339 NSMCE4AQ9NXX6 385 aa4.23□□□□□ -1.73
SNX1-205ENST00000559339 IL1RAPL1Q9NZN1 696 aa4.23□□□□□ -1.73
SNX1-205ENST00000559339 WHRNQ9P202 907 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms