RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 UBXN8O00124 270 aa12.07□□□□□ -0.48
TPM1-209ENST00000558072 POLR3GO15318 223 aaPredicted RBP12.07□□□□□ -0.48
TPM1-209ENST00000558072 DLX3O60479 287 aa12.07□□□□□ -0.48
TPM1-209ENST00000558072 NPHS1O60500 1241 aa12.07□□□□□ -0.48
TPM1-209ENST00000558072 SDC3O75056 442 aa12.07□□□□□ -0.48
TPM1-209ENST00000558072 STK16O75716 305 aa12.07□□□□□ -0.48
TPM1-209ENST00000558072 FKBP9O95302 570 aa12.07□□□□□ -0.48
TPM1-209ENST00000558072 AK4P27144 223 aaPredicted RBP12.07□□□□□ -0.48
TPM1-209ENST00000558072 SHMT2P34897 504 aa12.07□□□□□ -0.48
TPM1-209ENST00000558072 HK2P52789 917 aa12.07□□□□□ -0.48
TPM1-209ENST00000558072 WDR4P57081 412 aaKnown RBP12.07□□□□□ -0.48
TPM1-209ENST00000558072 GRIK2Q13002 908 aa12.07□□□□□ -0.48
TPM1-209ENST00000558072 STX3Q13277 289 aa12.07□□□□□ -0.48
TPM1-209ENST00000558072 MPP2Q14168 576 aa12.07□□□□□ -0.48
TPM1-209ENST00000558072 PCLAFQ15004 111 aa12.07□□□□□ -0.48
TPM1-209ENST00000558072 SF3A2Q15428 464 aaKnown RBP12.07□□□□□ -0.48
TPM1-209ENST00000558072 PFKFB4Q16877 469 aa12.07□□□□□ -0.48
TPM1-209ENST00000558072 CAPN13Q6MZZ7 669 aaPredicted RBP12.07□□□□□ -0.48
TPM1-209ENST00000558072 LRRC70Q7Z2Q7 622 aa12.07□□□□□ -0.48
TPM1-209ENST00000558072 NRROSQ86YC3 692 aa12.07□□□□□ -0.48
TPM1-209ENST00000558072 C10orf107Q8IVU9 208 aa12.07□□□□□ -0.48
TPM1-209ENST00000558072 SFRP1Q8N474 314 aa12.07□□□□□ -0.48
TPM1-209ENST00000558072 LILRA3Q8N6C8 439 aaPredicted RBP12.07□□□□□ -0.48
TPM1-209ENST00000558072 PTGR2Q8N8N7 351 aaPredicted RBP12.07□□□□□ -0.48
TPM1-209ENST00000558072 CCL4L1Q8NHW4 92 aa12.07□□□□□ -0.48
TPM1-209ENST00000558072 MDM1Q8TC05 714 aa12.07□□□□□ -0.48
TPM1-209ENST00000558072 SETD7Q8WTS6 366 aaKnown RBP12.07□□□□□ -0.48
TPM1-209ENST00000558072 UBTD2Q8WUN7 234 aa12.07□□□□□ -0.48
TPM1-209ENST00000558072 RHBDF1Q96CC6 855 aa12.07□□□□□ -0.48
TPM1-209ENST00000558072 INSM2Q96T92 566 aaPredicted RBP12.07□□□□□ -0.48
TPM1-209ENST00000558072 MIPEPQ99797 713 aa12.07□□□□□ -0.48
TPM1-209ENST00000558072 EPB41L1Q9H4G0 881 aa12.07□□□□□ -0.48
TPM1-209ENST00000558072 PFDN4Q9NQP4 134 aa12.07□□□□□ -0.48
TPM1-209ENST00000558072 THAP1Q9NVV9 213 aa12.07□□□□□ -0.48
TPM1-209ENST00000558072 NLGN3Q9NZ94 848 aa12.07□□□□□ -0.48
TPM1-209ENST00000558072 OR6C2Q9NZP2 312 aa12.07□□□□□ -0.48
TPM1-209ENST00000558072 OPTCQ9UBM4 332 aa12.07□□□□□ -0.48
TPM1-209ENST00000558072 PTBP2Q9UKA9 531 aaKnown RBP12.07□□□□□ -0.48
TPM1-209ENST00000558072 PSMD13Q9UNM6 376 aa12.07□□□□□ -0.48
TPM1-209ENST00000558072 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.07□□□□□ -0.48
TPM1-209ENST00000558072 PCDHGB2Q9Y5G2 931 aa12.07□□□□□ -0.48
TPM1-209ENST00000558072 A6NCN8 305 aa12.06□□□□□ -0.48
TPM1-209ENST00000558072 MATN2O00339 956 aa12.06□□□□□ -0.48
TPM1-209ENST00000558072 YY2O15391 372 aa12.06□□□□□ -0.48
TPM1-209ENST00000558072 PCDHGA12O60330 932 aa12.06□□□□□ -0.48
TPM1-209ENST00000558072 CCNDBP1O95273 360 aa12.06□□□□□ -0.48
TPM1-209ENST00000558072 GUCA1CO95843 209 aa12.06□□□□□ -0.48
TPM1-209ENST00000558072 TOP3BO95985 862 aaKnown RBP12.06□□□□□ -0.48
TPM1-209ENST00000558072 MTHFD2P13995 350 aa12.06□□□□□ -0.48
TPM1-209ENST00000558072 KCNA4P22459 653 aa12.06□□□□□ -0.48
TPM1-209ENST00000558072 EPHA8P29322 1005 aaPredicted RBP12.06□□□□□ -0.48
TPM1-209ENST00000558072 RAB28P51157 221 aa12.06□□□□□ -0.48
TPM1-209ENST00000558072 SPEM2Q0P670 501 aa12.06□□□□□ -0.48
TPM1-209ENST00000558072 C1orf61Q13536 156 aa12.06□□□□□ -0.48
TPM1-209ENST00000558072 CLCA4Q14CN2 919 aa12.06□□□□□ -0.48
TPM1-209ENST00000558072 HLA-BQ31612 363 aa12.06□□□□□ -0.48
TPM1-209ENST00000558072 OGFOD3Q6PK18 319 aa12.06□□□□□ -0.48
TPM1-209ENST00000558072 SFTPA2Q8IWL1 248 aa12.06□□□□□ -0.48
TPM1-209ENST00000558072 KLHDC8AQ8IYD2 350 aa12.06□□□□□ -0.48
TPM1-209ENST00000558072 SYTL1Q8IYJ3 562 aa12.06□□□□□ -0.48
TPM1-209ENST00000558072 HMGCLL1Q8TB92 370 aa12.06□□□□□ -0.48
TPM1-209ENST00000558072 SMPDL3AQ92484 453 aa12.06□□□□□ -0.48
TPM1-209ENST00000558072 EXT2Q93063 718 aa12.06□□□□□ -0.48
TPM1-209ENST00000558072 PHF21BQ96EK2 531 aa12.06□□□□□ -0.48
TPM1-209ENST00000558072 CAMK1GQ96NX5 476 aa12.06□□□□□ -0.48
TPM1-209ENST00000558072 HAUS8Q9BT25 410 aa12.06□□□□□ -0.48
TPM1-209ENST00000558072 CD244Q9BZW8 370 aa12.06□□□□□ -0.48
TPM1-209ENST00000558072 UNKQ9C0B0 810 aaKnown RBP12.06□□□□□ -0.48
TPM1-209ENST00000558072 NSRP1Q9H0G5 558 aaKnown RBP12.06□□□□□ -0.48
TPM1-209ENST00000558072 SLC32A1Q9H598 525 aa12.06□□□□□ -0.48
TPM1-209ENST00000558072 GAREM1Q9H706 876 aa12.06□□□□□ -0.48
TPM1-209ENST00000558072 PARD6AQ9NPB6 346 aa12.06□□□□□ -0.48
TPM1-209ENST00000558072 RXFP3Q9NSD7 469 aa12.06□□□□□ -0.48
TPM1-209ENST00000558072 UTP6Q9NYH9 597 aaKnown RBP12.06□□□□□ -0.48
TPM1-209ENST00000558072 GPRC5BQ9NZH0 403 aa12.06□□□□□ -0.48
TPM1-209ENST00000558072 CPNE7Q9UBL6 633 aa12.06□□□□□ -0.48
TPM1-209ENST00000558072 ADAMTS6Q9UKP5 1117 aa12.06□□□□□ -0.48
TPM1-209ENST00000558072 TDRKHQ9Y2W6 561 aaKnown RBP12.06□□□□□ -0.48
TPM1-209ENST00000558072 ENTPD2Q9Y5L3 495 aa12.06□□□□□ -0.48
TPM1-209ENST00000558072 ST14Q9Y5Y6 855 aa12.06□□□□□ -0.48
TPM1-209ENST00000558072 CUL9Q8IWT3 2517 aa12.06□□□□□ -0.48
TPM1-209ENST00000558072 USP34Q70CQ2 3546 aa12.06□□□□□ -0.48
TPM1-209ENST00000558072 CACNA1EQ15878 2313 aa12.05□□□□□ -0.48
TPM1-209ENST00000558072 NCF1BA6NI72 391 aaPredicted RBP12.05□□□□□ -0.48
TPM1-209ENST00000558072 NCF1CA8MVU1 366 aaPredicted RBP12.05□□□□□ -0.48
TPM1-209ENST00000558072 SLCO1B7G3V0H7 640 aa12.05□□□□□ -0.48
TPM1-209ENST00000558072 K7EPI3 171 aa12.05□□□□□ -0.48
TPM1-209ENST00000558072 SUPT7LO94864 414 aa12.05□□□□□ -0.48
TPM1-209ENST00000558072 SBK3P0C264 359 aa12.05□□□□□ -0.48
TPM1-209ENST00000558072 ZNF806P0C7X5 589 aa12.05□□□□□ -0.48
TPM1-209ENST00000558072 NCF1P14598 390 aaPredicted RBP12.05□□□□□ -0.48
TPM1-209ENST00000558072 EPB42P16452 691 aa12.05□□□□□ -0.48
TPM1-209ENST00000558072 HRH2P25021 359 aa12.05□□□□□ -0.48
TPM1-209ENST00000558072 FASLGP48023 281 aa12.05□□□□□ -0.48
TPM1-209ENST00000558072 KCNC1P48547 511 aa12.05□□□□□ -0.48
TPM1-209ENST00000558072 DUSP3P51452 185 aaPredicted RBP12.05□□□□□ -0.48
TPM1-209ENST00000558072 PNLIPRP1P54315 467 aa12.05□□□□□ -0.48
TPM1-209ENST00000558072 NAGLUP54802 743 aa12.05□□□□□ -0.48
TPM1-209ENST00000558072 HHEXQ03014 270 aa12.05□□□□□ -0.48
TPM1-209ENST00000558072 SLC14A1Q13336 389 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms