RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 CD244Q9BZW8 370 aa16.4■□□□□ 0.22
SNX1-203ENST00000558040 EML4Q9HC35 981 aaKnown RBP16.4■□□□□ 0.22
SNX1-203ENST00000558040 POT1Q9NUX5 634 aa16.4■□□□□ 0.22
SNX1-203ENST00000558040 SCHIP1Q9P0W5 487 aaPredicted RBP16.4■□□□□ 0.22
SNX1-203ENST00000558040 STOX2Q9P2F5 926 aaPredicted RBP16.4■□□□□ 0.22
SNX1-203ENST00000558040 OPTCQ9UBM4 332 aa16.4■□□□□ 0.22
SNX1-203ENST00000558040 STK38LQ9Y2H1 464 aa16.4■□□□□ 0.22
SNX1-203ENST00000558040 ANGPTL3Q9Y5C1 460 aa16.4■□□□□ 0.22
SNX1-203ENST00000558040 PCDHGA5Q9Y5G8 931 aa16.4■□□□□ 0.22
SNX1-203ENST00000558040 ZFC3H1O60293 1989 aaKnown RBP16.4■□□□□ 0.22
SNX1-203ENST00000558040 LMO7DNF2Z398 122 aa16.39■□□□□ 0.21
SNX1-203ENST00000558040 YKT6O15498 198 aa16.39■□□□□ 0.21
SNX1-203ENST00000558040 TAPBPO15533 448 aa16.39■□□□□ 0.21
SNX1-203ENST00000558040 CCNT2O60583 730 aaKnown RBP16.39■□□□□ 0.21
SNX1-203ENST00000558040 EPN2O95208 641 aa16.39■□□□□ 0.21
SNX1-203ENST00000558040 MLYCDO95822 493 aa16.39■□□□□ 0.21
SNX1-203ENST00000558040 EML2O95834 649 aa16.39■□□□□ 0.21
SNX1-203ENST00000558040 SLC16A8O95907 504 aa16.39■□□□□ 0.21
SNX1-203ENST00000558040 CELA2BP08218 269 aaPredicted RBP16.39■□□□□ 0.21
SNX1-203ENST00000558040 IMPA1P29218 277 aa16.39■□□□□ 0.21
SNX1-203ENST00000558040 PRKG2Q13237 762 aa16.39■□□□□ 0.21
SNX1-203ENST00000558040 CCSMST1Q4G0I0 132 aa16.39■□□□□ 0.21
SNX1-203ENST00000558040 AGTRAPQ6RW13 159 aa16.39■□□□□ 0.21
SNX1-203ENST00000558040 SYTL1Q8IYJ3 562 aa16.39■□□□□ 0.21
SNX1-203ENST00000558040 KIRREL3Q8IZU9 778 aa16.39■□□□□ 0.21
SNX1-203ENST00000558040 ZNF483Q8TF39 744 aaPredicted RBP16.39■□□□□ 0.21
SNX1-203ENST00000558040 ZDHHC1Q8WTX9 485 aa16.39■□□□□ 0.21
SNX1-203ENST00000558040 ZFPM2Q8WW38 1151 aa16.39■□□□□ 0.21
SNX1-203ENST00000558040 CAMK1GQ96NX5 476 aa16.39■□□□□ 0.21
SNX1-203ENST00000558040 ZNF317Q96PQ6 595 aaPredicted RBP16.39■□□□□ 0.21
SNX1-203ENST00000558040 PITPNM3Q9BZ71 974 aa16.39■□□□□ 0.21
SNX1-203ENST00000558040 EPN3Q9H201 632 aa16.39■□□□□ 0.21
SNX1-203ENST00000558040 GSTO2Q9H4Y5 243 aa16.39■□□□□ 0.21
SNX1-203ENST00000558040 PCTPQ9UKL6 214 aa16.39■□□□□ 0.21
SNX1-203ENST00000558040 SLC6A14Q9UN76 642 aa16.39■□□□□ 0.21
SNX1-203ENST00000558040 CSNK1G3Q9Y6M4 447 aa16.39■□□□□ 0.21
SNX1-203ENST00000558040 VCANP13611 3396 aa16.38■□□□□ 0.21
SNX1-203ENST00000558040 K7EPI3 171 aa16.38■□□□□ 0.21
SNX1-203ENST00000558040 E2F3O00716 465 aa16.38■□□□□ 0.21
SNX1-203ENST00000558040 GIPC1O14908 333 aa16.38■□□□□ 0.21
SNX1-203ENST00000558040 EDF1O60869 148 aaKnown RBP16.38■□□□□ 0.21
SNX1-203ENST00000558040 VIPP01282 170 aa16.38■□□□□ 0.21
SNX1-203ENST00000558040 SYPP08247 313 aa16.38■□□□□ 0.21
SNX1-203ENST00000558040 XRCC1P18887 633 aaPredicted RBP16.38■□□□□ 0.21
SNX1-203ENST00000558040 CCND1P24385 295 aa16.38■□□□□ 0.21
SNX1-203ENST00000558040 SLC6A12P48065 614 aa16.38■□□□□ 0.21
SNX1-203ENST00000558040 PNLIPRP1P54315 467 aa16.38■□□□□ 0.21
SNX1-203ENST00000558040 BNC1Q01954 994 aa16.38■□□□□ 0.21
SNX1-203ENST00000558040 OCRLQ01968 901 aa16.38■□□□□ 0.21
SNX1-203ENST00000558040 CLCQ05315 142 aa16.38■□□□□ 0.21
SNX1-203ENST00000558040 GALNT1Q10472 559 aaPredicted RBP16.38■□□□□ 0.21
SNX1-203ENST00000558040 GRIK2Q13002 908 aa16.38■□□□□ 0.21
SNX1-203ENST00000558040 LPAL2Q16609 132 aa16.38■□□□□ 0.21
SNX1-203ENST00000558040 ZNF423Q2M1K9 1284 aa16.38■□□□□ 0.21
SNX1-203ENST00000558040 PTCHD3Q3KNS1 767 aa16.38■□□□□ 0.21
SNX1-203ENST00000558040 FBXO48Q5FWF7 155 aa16.38■□□□□ 0.21
SNX1-203ENST00000558040 PRAMEF14Q5SWL7 426 aa16.38■□□□□ 0.21
SNX1-203ENST00000558040 CES4AQ5XG92 561 aa16.38■□□□□ 0.21
SNX1-203ENST00000558040 SLC23A3Q6PIS1 610 aa16.38■□□□□ 0.21
SNX1-203ENST00000558040 FAM47EQ6ZV65 393 aa16.38■□□□□ 0.21
SNX1-203ENST00000558040 SLC9B2Q86UD5 537 aa16.38■□□□□ 0.21
SNX1-203ENST00000558040 CRLF3Q8IUI8 442 aa16.38■□□□□ 0.21
SNX1-203ENST00000558040 RBM12BQ8IXT5 1001 aaKnown RBP16.38■□□□□ 0.21
SNX1-203ENST00000558040 KLHDC8AQ8IYD2 350 aa16.38■□□□□ 0.21
SNX1-203ENST00000558040 LRRC34Q8IZ02 419 aa16.38■□□□□ 0.21
SNX1-203ENST00000558040 SLC32A1Q9H598 525 aa16.38■□□□□ 0.21
SNX1-203ENST00000558040 STN1Q9H668 368 aaKnown RBP16.38■□□□□ 0.21
SNX1-203ENST00000558040 KIR3DX1Q9H7L2 352 aa16.38■□□□□ 0.21
SNX1-203ENST00000558040 CAPN10Q9HC96 672 aa16.38■□□□□ 0.21
SNX1-203ENST00000558040 SLCO1B3Q9NPD5 702 aa16.38■□□□□ 0.21
SNX1-203ENST00000558040 ZNF624Q9P2J8 865 aaPredicted RBP16.38■□□□□ 0.21
SNX1-203ENST00000558040 R4GN57 208 aa16.38■□□□□ 0.21
SNX1-203ENST00000558040 TP53BP1Q12888 1972 aaPredicted RBP16.38■□□□□ 0.21
SNX1-203ENST00000558040 FANCMQ8IYD8 2048 aa16.37■□□□□ 0.21
SNX1-203ENST00000558040 KRT87PA6NCN2 255 aa16.37■□□□□ 0.21
SNX1-203ENST00000558040 LRRC14BA6NHZ5 514 aa16.37■□□□□ 0.21
SNX1-203ENST00000558040 B4DGG1 531 aa16.37■□□□□ 0.21
SNX1-203ENST00000558040 YY2O15391 372 aa16.37■□□□□ 0.21
SNX1-203ENST00000558040 ITM2AO43736 263 aa16.37■□□□□ 0.21
SNX1-203ENST00000558040 SDC3O75056 442 aa16.37■□□□□ 0.21
SNX1-203ENST00000558040 KATNA1O75449 491 aa16.37■□□□□ 0.21
SNX1-203ENST00000558040 LYPLA1O75608 230 aaPredicted RBP16.37■□□□□ 0.21
SNX1-203ENST00000558040 WDR47O94967 919 aa16.37■□□□□ 0.21
SNX1-203ENST00000558040 CER1O95813 267 aa16.37■□□□□ 0.21
SNX1-203ENST00000558040 ERGP11308 486 aa16.37■□□□□ 0.21
SNX1-203ENST00000558040 EPB42P16452 691 aa16.37■□□□□ 0.21
SNX1-203ENST00000558040 MPLP40238 635 aa16.37■□□□□ 0.21
SNX1-203ENST00000558040 SLC19A1P41440 591 aa16.37■□□□□ 0.21
SNX1-203ENST00000558040 LCP2Q13094 533 aa16.37■□□□□ 0.21
SNX1-203ENST00000558040 PRKAA1Q13131 559 aa16.37■□□□□ 0.21
SNX1-203ENST00000558040 NAE1Q13564 534 aa16.37■□□□□ 0.21
SNX1-203ENST00000558040 GTF2H2Q13888 395 aa16.37■□□□□ 0.21
SNX1-203ENST00000558040 GRB7Q14451 532 aa16.37■□□□□ 0.21
SNX1-203ENST00000558040 RBBP7Q16576 425 aa16.37■□□□□ 0.21
SNX1-203ENST00000558040 C18orf21Q32NC0 220 aaPredicted RBP16.37■□□□□ 0.21
SNX1-203ENST00000558040 TRIM61Q5EBN2 209 aa16.37■□□□□ 0.21
SNX1-203ENST00000558040 ARL13AQ5H913 290 aaPredicted RBP16.37■□□□□ 0.21
SNX1-203ENST00000558040 CAPN13Q6MZZ7 669 aaPredicted RBP16.37■□□□□ 0.21
SNX1-203ENST00000558040 GTF2H2CQ6P1K8 395 aa16.37■□□□□ 0.21
SNX1-203ENST00000558040 GOLGA7Q7Z5G4 137 aa16.37■□□□□ 0.21
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