RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 IL15P40933 162 aaPredicted RBP3□□□□□ -1.93
TRAV28-201ENST00000557548 CAMLGP49069 296 aa3□□□□□ -1.93
TRAV28-201ENST00000557548 SERPINH1P50454 418 aaKnown RBP3□□□□□ -1.93
TRAV28-201ENST00000557548 MFAP3P55082 362 aa3□□□□□ -1.93
TRAV28-201ENST00000557548 ELLP55199 621 aaPredicted RBP3□□□□□ -1.93
TRAV28-201ENST00000557548 UCP2P55851 309 aa3□□□□□ -1.93
TRAV28-201ENST00000557548 TGFB2P61812 414 aa3□□□□□ -1.93
TRAV28-201ENST00000557548 PDE1BQ01064 536 aa3□□□□□ -1.93
TRAV28-201ENST00000557548 TRA2AQ13595 282 aaKnown RBP eCLIP3□□□□□ -1.93
TRAV28-201ENST00000557548 VEZF1Q14119 521 aa3□□□□□ -1.93
TRAV28-201ENST00000557548 SYT14P1Q58G82 188 aa3□□□□□ -1.93
TRAV28-201ENST00000557548 MANEAQ5SRI9 462 aa3□□□□□ -1.93
TRAV28-201ENST00000557548 ZCCHC12Q6PEW1 402 aa3□□□□□ -1.93
TRAV28-201ENST00000557548 SHC4Q6S5L8 630 aa3□□□□□ -1.93
TRAV28-201ENST00000557548 PCSK4Q6UW60 755 aa3□□□□□ -1.93
TRAV28-201ENST00000557548 PRSS55Q6UWB4 352 aaPredicted RBP3□□□□□ -1.93
TRAV28-201ENST00000557548 UNC5DQ6UXZ4 953 aa3□□□□□ -1.93
TRAV28-201ENST00000557548 RAD9BQ6WBX8 426 aa3□□□□□ -1.93
TRAV28-201ENST00000557548 TOM1L2Q6ZVM7 507 aa3□□□□□ -1.93
TRAV28-201ENST00000557548 CFAP206Q8IYR0 622 aa3□□□□□ -1.93
TRAV28-201ENST00000557548 APCDD1Q8J025 514 aa3□□□□□ -1.93
TRAV28-201ENST00000557548 ARHGAP24Q8N264 748 aa3□□□□□ -1.93
TRAV28-201ENST00000557548 GBGT1Q8N5D6 347 aa3□□□□□ -1.93
TRAV28-201ENST00000557548 PRSS3P2Q8NHM4 247 aa3□□□□□ -1.93
TRAV28-201ENST00000557548 URGCPQ8TCY9 931 aa3□□□□□ -1.93
TRAV28-201ENST00000557548 LRRC8CQ8TDW0 803 aa3□□□□□ -1.93
TRAV28-201ENST00000557548 WASF1Q92558 559 aa3□□□□□ -1.93
TRAV28-201ENST00000557548 FIG4Q92562 907 aa3□□□□□ -1.93
TRAV28-201ENST00000557548 PROX1Q92786 737 aa3□□□□□ -1.93
TRAV28-201ENST00000557548 SGF29Q96ES7 293 aa3□□□□□ -1.93
TRAV28-201ENST00000557548 FAM84BQ96KN1 310 aaPredicted RBP3□□□□□ -1.93
TRAV28-201ENST00000557548 TSGA13Q96PP4 275 aa3□□□□□ -1.93
TRAV28-201ENST00000557548 RAD9AQ99638 391 aa3□□□□□ -1.93
TRAV28-201ENST00000557548 SLX1AQ9BQ83 275 aa3□□□□□ -1.93
TRAV28-201ENST00000557548 TRMOQ9BU70 441 aa3□□□□□ -1.93
TRAV28-201ENST00000557548 KRTAP4-4Q9BYR3 166 aa3□□□□□ -1.93
TRAV28-201ENST00000557548 SLC2A11Q9BYW1 496 aa3□□□□□ -1.93
TRAV28-201ENST00000557548 LRMDAQ9H2I8 198 aa3□□□□□ -1.93
TRAV28-201ENST00000557548 SNX25Q9H3E2 840 aa3□□□□□ -1.93
TRAV28-201ENST00000557548 R3HDMLQ9H3Y0 253 aa3□□□□□ -1.93
TRAV28-201ENST00000557548 LIN28AQ9H9Z2 209 aaKnown RBP3□□□□□ -1.93
TRAV28-201ENST00000557548 PRMT8Q9NR22 394 aaPredicted RBP3□□□□□ -1.93
TRAV28-201ENST00000557548 PNPLA3Q9NST1 481 aa3□□□□□ -1.93
TRAV28-201ENST00000557548 INTS10Q9NVR2 710 aaKnown RBP3□□□□□ -1.93
TRAV28-201ENST00000557548 COMMD8Q9NX08 183 aa3□□□□□ -1.93
TRAV28-201ENST00000557548 TUBA8Q9NY65 449 aaPredicted RBP3□□□□□ -1.93
TRAV28-201ENST00000557548 ZNHIT2Q9UHR6 403 aa3□□□□□ -1.93
TRAV28-201ENST00000557548 GPR132Q9UNW8 380 aa3□□□□□ -1.93
TRAV28-201ENST00000557548 ITM2BQ9Y287 266 aa3□□□□□ -1.93
TRAV28-201ENST00000557548 TDRKHQ9Y2W6 561 aaKnown RBP3□□□□□ -1.93
TRAV28-201ENST00000557548 HEG1Q9ULI3 1381 aa3□□□□□ -1.93
TRAV28-201ENST00000557548 A0A1B0GVT2 93 aa2.99□□□□□ -1.93
TRAV28-201ENST00000557548 ELOVL7A1L3X0 281 aa2.99□□□□□ -1.93
TRAV28-201ENST00000557548 SLC9B1P1A6NJY1 282 aa2.99□□□□□ -1.93
TRAV28-201ENST00000557548 RGS14O43566 566 aa2.99□□□□□ -1.93
TRAV28-201ENST00000557548 SPRY3O43610 288 aa2.99□□□□□ -1.93
TRAV28-201ENST00000557548 SOCS5O75159 536 aa2.99□□□□□ -1.93
TRAV28-201ENST00000557548 WDPCPO95876 746 aa2.99□□□□□ -1.93
TRAV28-201ENST00000557548 SYF2O95926 243 aaKnown RBP2.99□□□□□ -1.93
TRAV28-201ENST00000557548 LDLRP01130 860 aa2.99□□□□□ -1.93
TRAV28-201ENST00000557548 IGHDP01880 384 aa2.99□□□□□ -1.93
TRAV28-201ENST00000557548 TPM2P07951 284 aa2.99□□□□□ -1.93
TRAV28-201ENST00000557548 KRT19P08727 400 aa2.99□□□□□ -1.93
TRAV28-201ENST00000557548 ACP2P11117 423 aa2.99□□□□□ -1.93
TRAV28-201ENST00000557548 FERP16591 822 aa2.99□□□□□ -1.93
TRAV28-201ENST00000557548 CCNA2P20248 432 aa2.99□□□□□ -1.93
TRAV28-201ENST00000557548 S1PR1P21453 382 aa2.99□□□□□ -1.93
TRAV28-201ENST00000557548 AHCYP23526 432 aa2.99□□□□□ -1.93
TRAV28-201ENST00000557548 PEX19P40855 299 aa2.99□□□□□ -1.93
TRAV28-201ENST00000557548 MAGEB1P43366 347 aa2.99□□□□□ -1.93
TRAV28-201ENST00000557548 NPBWR1P48145 328 aa2.99□□□□□ -1.93
TRAV28-201ENST00000557548 GPC3P51654 580 aa2.99□□□□□ -1.93
TRAV28-201ENST00000557548 ATXN3P54252 364 aaPredicted RBP2.99□□□□□ -1.93
TRAV28-201ENST00000557548 EGR4Q05215 589 aa2.99□□□□□ -1.93
TRAV28-201ENST00000557548 RUNX1T1Q06455 604 aa2.99□□□□□ -1.93
TRAV28-201ENST00000557548 GPS2Q13227 327 aa2.99□□□□□ -1.93
TRAV28-201ENST00000557548 DHX34Q14147 1143 aaKnown RBP2.99□□□□□ -1.93
TRAV28-201ENST00000557548 MAPK11Q15759 364 aa2.99□□□□□ -1.93
TRAV28-201ENST00000557548 NPTX1Q15818 432 aa2.99□□□□□ -1.93
TRAV28-201ENST00000557548 PTGISQ16647 500 aa2.99□□□□□ -1.93
TRAV28-201ENST00000557548 PRTGQ2VWP7 1150 aa2.99□□□□□ -1.93
TRAV28-201ENST00000557548 MCMDC2Q4G0Z9 681 aa2.99□□□□□ -1.93
TRAV28-201ENST00000557548 DDX59Q5T1V6 619 aaKnown RBP eCLIP2.99□□□□□ -1.93
TRAV28-201ENST00000557548 SPOUT1Q5T280 376 aaKnown RBP2.99□□□□□ -1.93
TRAV28-201ENST00000557548 STRIP1Q5VSL9 837 aa2.99□□□□□ -1.93
TRAV28-201ENST00000557548 KLC3Q6P597 504 aa2.99□□□□□ -1.93
TRAV28-201ENST00000557548 BTNL8Q6UX41 500 aa2.99□□□□□ -1.93
TRAV28-201ENST00000557548 CCNI2Q6ZMN8 369 aaPredicted RBP2.99□□□□□ -1.93
TRAV28-201ENST00000557548 PHLDB2Q86SQ0 1253 aa2.99□□□□□ -1.93
TRAV28-201ENST00000557548 PIP4P1Q86T03 277 aa2.99□□□□□ -1.93
TRAV28-201ENST00000557548 ZNF410Q86VK4 478 aa2.99□□□□□ -1.93
TRAV28-201ENST00000557548 GLCCI1Q86VQ1 547 aa2.99□□□□□ -1.93
TRAV28-201ENST00000557548 COMMD2Q86X83 199 aa2.99□□□□□ -1.93
TRAV28-201ENST00000557548 ARFGAP1Q8N6T3 406 aa2.99□□□□□ -1.93
TRAV28-201ENST00000557548 BMPERQ8N8U9 685 aa2.99□□□□□ -1.93
TRAV28-201ENST00000557548 MRPL43Q8N983 215 aaKnown RBP2.99□□□□□ -1.93
TRAV28-201ENST00000557548 CLEC1AQ8NC01 280 aa2.99□□□□□ -1.93
TRAV28-201ENST00000557548 ZBTB44Q8NCP5 570 aa2.99□□□□□ -1.93
TRAV28-201ENST00000557548 KIAA0895Q8NCT3 520 aa2.99□□□□□ -1.93
TRAV28-201ENST00000557548 ZNF548Q8NEK5 533 aaPredicted RBP2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms