RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 GPN3Q9UHW5 284 aaPredicted RBP15.33■□□□□ 0.04
TUBB3-213ENST00000557262 ZNF148Q9UQR1 794 aa15.33■□□□□ 0.04
TUBB3-213ENST00000557262 HCRTR1O43613 425 aa15.32■□□□□ 0.04
TUBB3-213ENST00000557262 SORBS2O94875 1100 aaKnown RBP15.32■□□□□ 0.04
TUBB3-213ENST00000557262 IFNB1P01574 187 aa15.32■□□□□ 0.04
TUBB3-213ENST00000557262 CCR7P32248 378 aa15.32■□□□□ 0.04
TUBB3-213ENST00000557262 GRIA1P42261 906 aa15.32■□□□□ 0.04
TUBB3-213ENST00000557262 ACVR1Q04771 509 aa15.32■□□□□ 0.04
TUBB3-213ENST00000557262 ATP1A4Q13733 1029 aa15.32■□□□□ 0.04
TUBB3-213ENST00000557262 DEFB110Q30KQ9 67 aa15.32■□□□□ 0.04
TUBB3-213ENST00000557262 FASTKD1Q53R41 847 aaKnown RBP15.32■□□□□ 0.04
TUBB3-213ENST00000557262 DNAJC21Q5F1R6 531 aaKnown RBP15.32■□□□□ 0.04
TUBB3-213ENST00000557262 SEL1L2Q5TEA6 688 aa15.32■□□□□ 0.04
TUBB3-213ENST00000557262 JMJD6Q6NYC1 403 aaPredicted RBP15.32■□□□□ 0.04
TUBB3-213ENST00000557262 NLRP9Q7RTR0 991 aa15.32■□□□□ 0.04
TUBB3-213ENST00000557262 SLC22A15Q8IZD6 547 aa15.32■□□□□ 0.04
TUBB3-213ENST00000557262 PROKR1Q8TCW9 393 aa15.32■□□□□ 0.04
TUBB3-213ENST00000557262 ASZ1Q8WWH4 475 aa15.32■□□□□ 0.04
TUBB3-213ENST00000557262 ZNF778Q96MU6 729 aa15.32■□□□□ 0.04
TUBB3-213ENST00000557262 GBP5Q96PP8 586 aa15.32■□□□□ 0.04
TUBB3-213ENST00000557262 SMAD5Q99717 465 aaKnown RBP15.32■□□□□ 0.04
TUBB3-213ENST00000557262 CARD6Q9BX69 1037 aa15.32■□□□□ 0.04
TUBB3-213ENST00000557262 TSSK1BQ9BXA7 367 aa15.32■□□□□ 0.04
TUBB3-213ENST00000557262 AP1M1Q9BXS5 423 aa15.32■□□□□ 0.04
TUBB3-213ENST00000557262 CASS4Q9NQ75 786 aa15.32■□□□□ 0.04
TUBB3-213ENST00000557262 GPR83Q9NYM4 423 aa15.32■□□□□ 0.04
TUBB3-213ENST00000557262 PLAGL1Q9UM63 463 aa15.32■□□□□ 0.04
TUBB3-213ENST00000557262 SRPK3Q9UPE1 567 aa15.32■□□□□ 0.04
TUBB3-213ENST00000557262 PLCL2Q9UPR0 1127 aa15.32■□□□□ 0.04
TUBB3-213ENST00000557262 CAPN6Q9Y6Q1 641 aa15.32■□□□□ 0.04
TUBB3-213ENST00000557262 GPC4O75487 556 aa15.31■□□□□ 0.04
TUBB3-213ENST00000557262 GNLYP22749 145 aa15.31■□□□□ 0.04
TUBB3-213ENST00000557262 OTX2P32243 289 aa15.31■□□□□ 0.04
TUBB3-213ENST00000557262 UQCRFS1P47985 274 aa15.31■□□□□ 0.04
TUBB3-213ENST00000557262 CSE1LP55060 971 aaKnown RBP15.31■□□□□ 0.04
TUBB3-213ENST00000557262 PRAMEP78395 509 aa15.31■□□□□ 0.04
TUBB3-213ENST00000557262 HSPA14Q0VDF9 509 aa15.31■□□□□ 0.04
TUBB3-213ENST00000557262 INPP5JQ15735 1006 aaPredicted RBP15.31■□□□□ 0.04
TUBB3-213ENST00000557262 KYNUQ16719 465 aa15.31■□□□□ 0.04
TUBB3-213ENST00000557262 FHL5Q5TD97 284 aa15.31■□□□□ 0.04
TUBB3-213ENST00000557262 C1orf189Q5VU69 101 aa15.31■□□□□ 0.04
TUBB3-213ENST00000557262 ZNF534Q76KX8 674 aa15.31■□□□□ 0.04
TUBB3-213ENST00000557262 SLC13A5Q86YT5 568 aaPredicted RBP15.31■□□□□ 0.04
TUBB3-213ENST00000557262 ZNF655Q8N720 491 aaPredicted RBP15.31■□□□□ 0.04
TUBB3-213ENST00000557262 C1orf54Q8WWF1 131 aa15.31■□□□□ 0.04
TUBB3-213ENST00000557262 PEX13Q92968 403 aa15.31■□□□□ 0.04
TUBB3-213ENST00000557262 PTERQ96BW5 349 aa15.31■□□□□ 0.04
TUBB3-213ENST00000557262 FER1L6-AS2Q96M78 137 aa15.31■□□□□ 0.04
TUBB3-213ENST00000557262 MFRPQ9BY79 579 aa15.31■□□□□ 0.04
TUBB3-213ENST00000557262 LRRC4CQ9HCJ2 640 aa15.31■□□□□ 0.04
TUBB3-213ENST00000557262 SLAMF7Q9NQ25 335 aa15.31■□□□□ 0.04
TUBB3-213ENST00000557262 RAB6BQ9NRW1 208 aa15.31■□□□□ 0.04
TUBB3-213ENST00000557262 C5AR2Q9P296 337 aa15.31■□□□□ 0.04
TUBB3-213ENST00000557262 IFT80Q9P2H3 777 aaPredicted RBP15.31■□□□□ 0.04
TUBB3-213ENST00000557262 DHCR7Q9UBM7 475 aaKnown RBP15.31■□□□□ 0.04
TUBB3-213ENST00000557262 ANAPC5Q9UJX4 755 aa15.31■□□□□ 0.04
TUBB3-213ENST00000557262 CDYLQ9Y232 598 aa15.31■□□□□ 0.04
TUBB3-213ENST00000557262 PTRH2Q9Y3E5 179 aaKnown RBP15.31■□□□□ 0.04
TUBB3-213ENST00000557262 BLACEA4D250 179 aa15.3■□□□□ 0.04
TUBB3-213ENST00000557262 PEX12O00623 359 aa15.3■□□□□ 0.04
TUBB3-213ENST00000557262 ZSCAN9O15535 394 aaPredicted RBP15.3■□□□□ 0.04
TUBB3-213ENST00000557262 IGHEP01854 428 aa15.3■□□□□ 0.04
TUBB3-213ENST00000557262 RPN2P04844 631 aa15.3■□□□□ 0.04
TUBB3-213ENST00000557262 CTSBP07858 339 aa15.3■□□□□ 0.04
TUBB3-213ENST00000557262 ETS1P14921 441 aa15.3■□□□□ 0.04
TUBB3-213ENST00000557262 VARSP26640 1264 aaKnown RBP15.3■□□□□ 0.04
TUBB3-213ENST00000557262 PEBP1P30086 187 aaKnown RBP15.3■□□□□ 0.04
TUBB3-213ENST00000557262 FOLR3P41439 243 aa15.3■□□□□ 0.04
TUBB3-213ENST00000557262 RAB28P51157 221 aa15.3■□□□□ 0.04
TUBB3-213ENST00000557262 SNX1Q13596 522 aa15.3■□□□□ 0.04
TUBB3-213ENST00000557262 SEMA3AQ14563 771 aa15.3■□□□□ 0.04
TUBB3-213ENST00000557262 VRK3Q8IV63 474 aa15.3■□□□□ 0.04
TUBB3-213ENST00000557262 RP1L1Q8IWN7 2480 aaPredicted RBP15.3■□□□□ 0.04
TUBB3-213ENST00000557262 RBMXL3Q8N7X1 1067 aaKnown RBP15.3■□□□□ 0.04
TUBB3-213ENST00000557262 SLC22A18Q96BI1 424 aa15.3■□□□□ 0.04
TUBB3-213ENST00000557262 NDC1Q9BTX1 674 aa15.3■□□□□ 0.04
TUBB3-213ENST00000557262 TXLNGQ9NUQ3 528 aa15.3■□□□□ 0.04
TUBB3-213ENST00000557262 IRAK4Q9NWZ3 460 aa15.3■□□□□ 0.04
TUBB3-213ENST00000557262 EURLQ9NYK6 297 aa15.3■□□□□ 0.04
TUBB3-213ENST00000557262 NDOR1Q9UHB4 597 aa15.3■□□□□ 0.04
TUBB3-213ENST00000557262 TCAF1Q9Y4C2 921 aa15.3■□□□□ 0.04
TUBB3-213ENST00000557262 USP9YO00507 2555 aaPredicted RBP15.29■□□□□ 0.04
TUBB3-213ENST00000557262 USP9XQ93008 2570 aaPredicted RBP15.29■□□□□ 0.04
TUBB3-213ENST00000557262 IQCF5A8MTL0 148 aa15.29■□□□□ 0.04
TUBB3-213ENST00000557262 KLHL41O60662 606 aa15.29■□□□□ 0.04
TUBB3-213ENST00000557262 APOA4P06727 396 aa15.29■□□□□ 0.04
TUBB3-213ENST00000557262 APRTP07741 180 aa15.29■□□□□ 0.04
TUBB3-213ENST00000557262 CD9P21926 228 aa15.29■□□□□ 0.04
TUBB3-213ENST00000557262 PKLRP30613 574 aa15.29■□□□□ 0.04
TUBB3-213ENST00000557262 NKAIN1Q4KMZ8 207 aa15.29■□□□□ 0.04
TUBB3-213ENST00000557262 AARS2Q5JTZ9 985 aaKnown RBP15.29■□□□□ 0.04
TUBB3-213ENST00000557262 PCID2Q5JVF3 399 aa15.29■□□□□ 0.04
TUBB3-213ENST00000557262 SLC6A19Q695T7 634 aa15.29■□□□□ 0.04
TUBB3-213ENST00000557262 MRPL14Q6P1L8 145 aaKnown RBP15.29■□□□□ 0.04
TUBB3-213ENST00000557262 MRGPREQ86SM8 312 aa15.29■□□□□ 0.04
TUBB3-213ENST00000557262 PRUNE1Q86TP1 453 aa15.29■□□□□ 0.04
TUBB3-213ENST00000557262 GAS2L3Q86XJ1 694 aa15.29■□□□□ 0.04
TUBB3-213ENST00000557262 MCATQ8IVS2 390 aaKnown RBP15.29■□□□□ 0.04
TUBB3-213ENST00000557262 FAM20CQ8IXL6 584 aa15.29■□□□□ 0.04
TUBB3-213ENST00000557262 CCDC89Q8N998 374 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms