RNA–Protein interactions for RNA: ENST00000557159.5

APEX1-216, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 2

Gene APEX1, Length 1,803 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-216ENST00000557159 GPRIN3Q6ZVF9 776 aa12.3□□□□□ -0.44
APEX1-216ENST00000557159 TMEM179BQ7Z7N9 219 aa12.3□□□□□ -0.44
APEX1-216ENST00000557159 TAC4Q86UU9 113 aa12.3□□□□□ -0.44
APEX1-216ENST00000557159 CALHM3Q86XJ0 350 aa12.3□□□□□ -0.44
APEX1-216ENST00000557159 HS3ST5Q8IZT8 346 aa12.3□□□□□ -0.44
APEX1-216ENST00000557159 CARNMT1Q8N4J0 409 aa12.3□□□□□ -0.44
APEX1-216ENST00000557159 NKAPQ8N5F7 415 aaKnown RBP12.3□□□□□ -0.44
APEX1-216ENST00000557159 PARP16Q8N5Y8 322 aa12.3□□□□□ -0.44
APEX1-216ENST00000557159 PAF1Q8N7H5 531 aa12.3□□□□□ -0.44
APEX1-216ENST00000557159 RTL3Q8N8U3 475 aaKnown RBP12.3□□□□□ -0.44
APEX1-216ENST00000557159 ZMIZ2Q8NF64 920 aa12.3□□□□□ -0.44
APEX1-216ENST00000557159 FBXO30Q8TB52 745 aa12.3□□□□□ -0.44
APEX1-216ENST00000557159 FIG4Q92562 907 aa12.3□□□□□ -0.44
APEX1-216ENST00000557159 CDK5RAP1Q96SZ6 601 aaKnown RBP12.3□□□□□ -0.44
APEX1-216ENST00000557159 CEP44Q9C0F1 390 aa12.3□□□□□ -0.44
APEX1-216ENST00000557159 CSNK1G1Q9HCP0 422 aa12.3□□□□□ -0.44
APEX1-216ENST00000557159 SEMA4BQ9NPR2 832 aaPredicted RBP12.3□□□□□ -0.44
APEX1-216ENST00000557159 PLCXD1Q9NUJ7 323 aa12.3□□□□□ -0.44
APEX1-216ENST00000557159 IL37Q9NZH6 218 aa12.3□□□□□ -0.44
APEX1-216ENST00000557159 TBC1D14Q9P2M4 693 aa12.3□□□□□ -0.44
APEX1-216ENST00000557159 NUDT5Q9UKK9 219 aa12.3□□□□□ -0.44
APEX1-216ENST00000557159 WBP11Q9Y2W2 641 aaKnown RBP12.3□□□□□ -0.44
APEX1-216ENST00000557159 PKP3Q9Y446 797 aa12.3□□□□□ -0.44
APEX1-216ENST00000557159 TIMM22Q9Y584 194 aa12.3□□□□□ -0.44
APEX1-216ENST00000557159 SNX10Q9Y5X0 201 aa12.3□□□□□ -0.44
APEX1-216ENST00000557159 TRBV5-3A0A0A0MS03 114 aa12.29□□□□□ -0.44
APEX1-216ENST00000557159 MUSKO15146 869 aa12.29□□□□□ -0.44
APEX1-216ENST00000557159 ECI2O75521 394 aa12.29□□□□□ -0.44
APEX1-216ENST00000557159 USP17L7P0C7H9 530 aa12.29□□□□□ -0.44
APEX1-216ENST00000557159 ALDH4A1P30038 563 aa12.29□□□□□ -0.44
APEX1-216ENST00000557159 AKT1P31749 480 aa12.29□□□□□ -0.44
APEX1-216ENST00000557159 CTSKP43235 329 aa12.29□□□□□ -0.44
APEX1-216ENST00000557159 CLK1P49759 484 aaKnown RBP12.29□□□□□ -0.44
APEX1-216ENST00000557159 CLK3P49761 638 aaKnown RBP12.29□□□□□ -0.44
APEX1-216ENST00000557159 STC1P52823 247 aa12.29□□□□□ -0.44
APEX1-216ENST00000557159 LSM3P62310 102 aaKnown RBP12.29□□□□□ -0.44
APEX1-216ENST00000557159 YWHAHQ04917 246 aaPredicted RBP12.29□□□□□ -0.44
APEX1-216ENST00000557159 RAD51Q06609 339 aa12.29□□□□□ -0.44
APEX1-216ENST00000557159 RUNDC3AQ59EK9 446 aa12.29□□□□□ -0.44
APEX1-216ENST00000557159 FAM209AQ5JX71 171 aa12.29□□□□□ -0.44
APEX1-216ENST00000557159 COLEC12Q5KU26 742 aa12.29□□□□□ -0.44
APEX1-216ENST00000557159 VN1R5Q7Z5H4 357 aa12.29□□□□□ -0.44
APEX1-216ENST00000557159 SNX20Q7Z614 316 aa12.29□□□□□ -0.44
APEX1-216ENST00000557159 METTL23Q86XA0 190 aa12.29□□□□□ -0.44
APEX1-216ENST00000557159 CCDC103Q8IW40 242 aa12.29□□□□□ -0.44
APEX1-216ENST00000557159 PGBD3Q8N328 593 aa12.29□□□□□ -0.44
APEX1-216ENST00000557159 TEX26Q8N6G2 289 aa12.29□□□□□ -0.44
APEX1-216ENST00000557159 Q8N9G6 341 aaPredicted RBP12.29□□□□□ -0.44
APEX1-216ENST00000557159 ZNF540Q8NDQ6 660 aa12.29□□□□□ -0.44
APEX1-216ENST00000557159 SLC13A3Q8WWT9 602 aa12.29□□□□□ -0.44
APEX1-216ENST00000557159 GTF2H4Q92759 462 aa12.29□□□□□ -0.44
APEX1-216ENST00000557159 EXT2Q93063 718 aa12.29□□□□□ -0.44
APEX1-216ENST00000557159 FAM162AQ96A26 154 aa12.29□□□□□ -0.44
APEX1-216ENST00000557159 FUBP1Q96AE4 644 aaKnown RBP12.29□□□□□ -0.44
APEX1-216ENST00000557159 PYURFQ96I23 114 aa12.29□□□□□ -0.44
APEX1-216ENST00000557159 ZFP42Q96MM3 310 aa12.29□□□□□ -0.44
APEX1-216ENST00000557159 UROC1Q96N76 676 aa12.29□□□□□ -0.44
APEX1-216ENST00000557159 CDADC1Q9BWV3 514 aa12.29□□□□□ -0.44
APEX1-216ENST00000557159 PIF1Q9H611 641 aa12.29□□□□□ -0.44
APEX1-216ENST00000557159 ASIC5Q9NY37 505 aa12.29□□□□□ -0.44
APEX1-216ENST00000557159 VAPAQ9P0L0 249 aa12.29□□□□□ -0.44
APEX1-216ENST00000557159 FBXO10Q9UK96 956 aa12.29□□□□□ -0.44
APEX1-216ENST00000557159 NOD1Q9Y239 953 aa12.29□□□□□ -0.44
APEX1-216ENST00000557159 PCDHGB6Q9Y5F9 930 aa12.29□□□□□ -0.44
APEX1-216ENST00000557159 SPO11Q9Y5K1 396 aa12.29□□□□□ -0.44
APEX1-216ENST00000557159 ARL5CA6NH57 179 aa12.28□□□□□ -0.44
APEX1-216ENST00000557159 GOLGA8CPA6NN73 597 aa12.28□□□□□ -0.44
APEX1-216ENST00000557159 PDZK1P1A8MUH7 402 aa12.28□□□□□ -0.44
APEX1-216ENST00000557159 FAM25AB3EWG3 89 aa12.28□□□□□ -0.44
APEX1-216ENST00000557159 FAM25CB3EWG5 89 aa12.28□□□□□ -0.44
APEX1-216ENST00000557159 FAM25GB3EWG6 89 aa12.28□□□□□ -0.44
APEX1-216ENST00000557159 CAPN5O15484 640 aaPredicted RBP12.28□□□□□ -0.44
APEX1-216ENST00000557159 IRAK2O43187 625 aa12.28□□□□□ -0.44
APEX1-216ENST00000557159 AIREO43918 545 aa12.28□□□□□ -0.44
APEX1-216ENST00000557159 CREG1O75629 220 aa12.28□□□□□ -0.44
APEX1-216ENST00000557159 RPP40O75818 363 aaKnown RBP12.28□□□□□ -0.44
APEX1-216ENST00000557159 EPOP01588 193 aa12.28□□□□□ -0.44
APEX1-216ENST00000557159 ODC1P11926 461 aa12.28□□□□□ -0.44
APEX1-216ENST00000557159 SPNP16150 400 aa12.28□□□□□ -0.44
APEX1-216ENST00000557159 PRKCAP17252 672 aa12.28□□□□□ -0.44
APEX1-216ENST00000557159 FSHRP23945 695 aa12.28□□□□□ -0.44
APEX1-216ENST00000557159 PSMA3P25788 255 aa12.28□□□□□ -0.44
APEX1-216ENST00000557159 FMO3P31513 532 aa12.28□□□□□ -0.44
APEX1-216ENST00000557159 CLCNKBP51801 687 aa12.28□□□□□ -0.44
APEX1-216ENST00000557159 ARHGDIAP52565 204 aa12.28□□□□□ -0.44
APEX1-216ENST00000557159 NKX2-5P52952 324 aaPredicted RBP12.28□□□□□ -0.44
APEX1-216ENST00000557159 MAD2L1Q13257 205 aaPredicted RBP12.28□□□□□ -0.44
APEX1-216ENST00000557159 ATAD3CQ5T2N8 411 aa12.28□□□□□ -0.44
APEX1-216ENST00000557159 CYP4Z1Q86W10 505 aa12.28□□□□□ -0.44
APEX1-216ENST00000557159 SH3RF2Q8TEC5 729 aa12.28□□□□□ -0.44
APEX1-216ENST00000557159 TMCO6Q96DC7 493 aa12.28□□□□□ -0.44
APEX1-216ENST00000557159 SMARCD1Q96GM5 515 aa12.28□□□□□ -0.44
APEX1-216ENST00000557159 CEP295NLQ96MC4 621 aa12.28□□□□□ -0.44
APEX1-216ENST00000557159 GAD1Q99259 594 aa12.28□□□□□ -0.44
APEX1-216ENST00000557159 RAD9AQ99638 391 aa12.28□□□□□ -0.44
APEX1-216ENST00000557159 GDF15Q99988 308 aa12.28□□□□□ -0.44
APEX1-216ENST00000557159 ACBD6Q9BR61 282 aa12.28□□□□□ -0.44
APEX1-216ENST00000557159 ATXN3LQ9H3M9 355 aa12.28□□□□□ -0.44
APEX1-216ENST00000557159 CRTAC1Q9NQ79 661 aa12.28□□□□□ -0.44
APEX1-216ENST00000557159 FBXL12Q9NXK8 326 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms