RNA–Protein interactions for RNA: ENST00000556029.5

TMPO-212, Transcript of thymopoietin, human

TSL 1 (best) BASIC

Gene TMPO, Length 4,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMPO-212	ENST00000556029	TCF25	Q9BQ70	676 aa		12.05	□□□□□ -0.48
TMPO-212	ENST00000556029	CTPS2	Q9NRF8	586 aa		12.05	□□□□□ -0.48
TMPO-212	ENST00000556029	CCM2L	Q9NUG4	571 aa	Predicted RBP	12.05	□□□□□ -0.48
TMPO-212	ENST00000556029	GSTK1	Q9Y2Q3	226 aa		12.05	□□□□□ -0.48
TMPO-212	ENST00000556029	POLR1D	Q9Y2S0	133 aa		12.05	□□□□□ -0.48
TMPO-212	ENST00000556029	ZSWIM8	A7E2V4	1837 aa		12.05	□□□□□ -0.48
TMPO-212	ENST00000556029	UTRN	P46939	3433 aa		12.05	□□□□□ -0.48
TMPO-212	ENST00000556029	PLOD2	O00469	737 aa		12.05	□□□□□ -0.48
TMPO-212	ENST00000556029	ARPC2	O15144	300 aa		12.05	□□□□□ -0.48
TMPO-212	ENST00000556029	HLA-DQA2	P01906	255 aa		12.05	□□□□□ -0.48
TMPO-212	ENST00000556029	FGF1	P05230	155 aa		12.05	□□□□□ -0.48
TMPO-212	ENST00000556029	PAX3	P23760	479 aa		12.05	□□□□□ -0.48
TMPO-212	ENST00000556029	HOXC13	P31276	330 aa		12.05	□□□□□ -0.48
TMPO-212	ENST00000556029	PPM1A	P35813	382 aa		12.05	□□□□□ -0.48
TMPO-212	ENST00000556029	GUCA1A	P43080	201 aa	Predicted RBP	12.05	□□□□□ -0.48
TMPO-212	ENST00000556029	FOXA1	P55317	472 aa		12.05	□□□□□ -0.48
TMPO-212	ENST00000556029	ECT2L	Q008S8	904 aa		12.05	□□□□□ -0.48
TMPO-212	ENST00000556029	LCP2	Q13094	533 aa		12.05	□□□□□ -0.48
TMPO-212	ENST00000556029	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	12.05	□□□□□ -0.48	1e-17	■■■■■ 37.5
TMPO-212	ENST00000556029	BEND5	Q7L4P6	421 aa		12.05	□□□□□ -0.48
TMPO-212	ENST00000556029	FUNDC1	Q8IVP5	155 aa		12.05	□□□□□ -0.48
TMPO-212	ENST00000556029	ZUFSP	Q96AP4	578 aa		12.05	□□□□□ -0.48
TMPO-212	ENST00000556029	GAL3ST1	Q99999	423 aa		12.05	□□□□□ -0.48
TMPO-212	ENST00000556029	ATG10	Q9H0Y0	220 aa		12.05	□□□□□ -0.48
TMPO-212	ENST00000556029	OAZ3	Q9UMX2	235 aa		12.05	□□□□□ -0.48
TMPO-212	ENST00000556029	F5	P12259	2224 aa		12.05	□□□□□ -0.48
TMPO-212	ENST00000556029	CACNA1C	Q13936	2221 aa		12.05	□□□□□ -0.48
TMPO-212	ENST00000556029	FAM186A	A6NE01	2351 aa		12.05	□□□□□ -0.48
TMPO-212	ENST00000556029	SLC22A3	O75751	556 aa		12.05	□□□□□ -0.48
TMPO-212	ENST00000556029	TSPAN9	O75954	239 aa		12.05	□□□□□ -0.48
TMPO-212	ENST00000556029	SNX4	O95219	450 aa		12.05	□□□□□ -0.48
TMPO-212	ENST00000556029	IGLV3-25	P01717	112 aa		12.05	□□□□□ -0.48
TMPO-212	ENST00000556029	OR56A5	P0C7T3	313 aa		12.05	□□□□□ -0.48
TMPO-212	ENST00000556029	CAPN3	P20807	821 aa		12.05	□□□□□ -0.48
TMPO-212	ENST00000556029	RPL10	P27635	214 aa	Known RBP	12.05	□□□□□ -0.48
TMPO-212	ENST00000556029	WAS	P42768	502 aa		12.05	□□□□□ -0.48
TMPO-212	ENST00000556029	CTSK	P43235	329 aa		12.05	□□□□□ -0.48
TMPO-212	ENST00000556029	PSMD8	P48556	350 aa		12.05	□□□□□ -0.48
TMPO-212	ENST00000556029	DGKE	P52429	567 aa		12.05	□□□□□ -0.48
TMPO-212	ENST00000556029	ATP6V0D1	P61421	351 aa		12.05	□□□□□ -0.48
TMPO-212	ENST00000556029	MERTK	Q12866	999 aa		12.05	□□□□□ -0.48
TMPO-212	ENST00000556029	OR4D1	Q15615	310 aa		12.05	□□□□□ -0.48
TMPO-212	ENST00000556029	MS4A13	Q5J8X5	152 aa		12.05	□□□□□ -0.48
TMPO-212	ENST00000556029	MSANTD2	Q6P1R3	559 aa		12.05	□□□□□ -0.48
TMPO-212	ENST00000556029	BORA	Q6PGQ7	559 aa		12.05	□□□□□ -0.48
TMPO-212	ENST00000556029	CYP4Z2P	Q8N1L4	340 aa		12.05	□□□□□ -0.48
TMPO-212	ENST00000556029	SCML4	Q8N228	414 aa		12.05	□□□□□ -0.48
TMPO-212	ENST00000556029	ZNF366	Q8N895	744 aa		12.05	□□□□□ -0.48
TMPO-212	ENST00000556029	VANGL1	Q8TAA9	524 aa	Predicted RBP	12.05	□□□□□ -0.48
TMPO-212	ENST00000556029	CEP295NL	Q96MC4	621 aa		12.05	□□□□□ -0.48
TMPO-212	ENST00000556029	SLC2A11	Q9BYW1	496 aa		12.05	□□□□□ -0.48
TMPO-212	ENST00000556029	PRRG3	Q9BZD7	231 aa		12.05	□□□□□ -0.48
TMPO-212	ENST00000556029	NDOR1	Q9UHB4	597 aa		12.05	□□□□□ -0.48
TMPO-212	ENST00000556029	SARDH	Q9UL12	918 aa		12.05	□□□□□ -0.48
TMPO-212	ENST00000556029		A0A0D9SEW6	157 aa		12.04	□□□□□ -0.48
TMPO-212	ENST00000556029	CCDC182	A6NF36	153 aa		12.04	□□□□□ -0.48
TMPO-212	ENST00000556029		J3QRK9	145 aa		12.04	□□□□□ -0.48
TMPO-212	ENST00000556029	BMP2	P12643	396 aa		12.04	□□□□□ -0.48
TMPO-212	ENST00000556029	CES1	P23141	567 aa		12.04	□□□□□ -0.48
TMPO-212	ENST00000556029	ANXA11	P50995	505 aa	Known RBP	12.04	□□□□□ -0.48
TMPO-212	ENST00000556029	TIMM50	Q3ZCQ8	353 aa		12.04	□□□□□ -0.48
TMPO-212	ENST00000556029	FNDC3B	Q53EP0	1204 aa	Known RBP	12.04	□□□□□ -0.48
TMPO-212	ENST00000556029	CLLU1OS	Q5K130	101 aa		12.04	□□□□□ -0.48
TMPO-212	ENST00000556029	MANEAL	Q5VSG8	457 aa		12.04	□□□□□ -0.48
TMPO-212	ENST00000556029	DEF8	Q6ZN54	512 aa		12.04	□□□□□ -0.48
TMPO-212	ENST00000556029	POMGNT2	Q8NAT1	580 aa		12.04	□□□□□ -0.48
TMPO-212	ENST00000556029	FBXL8	Q96CD0	374 aa		12.04	□□□□□ -0.48
TMPO-212	ENST00000556029	INTS7	Q9NVH2	962 aa	Known RBP	12.04	□□□□□ -0.48
TMPO-212	ENST00000556029	PHF24	Q9UPV7	400 aa		12.04	□□□□□ -0.48
TMPO-212	ENST00000556029		G3V2T6	193 aa		12.04	□□□□□ -0.48
TMPO-212	ENST00000556029	RCVRN	P35243	200 aa		12.04	□□□□□ -0.48
TMPO-212	ENST00000556029	DIO3	P55073	304 aa		12.04	□□□□□ -0.48
TMPO-212	ENST00000556029	CDC42	P60953	191 aa		12.04	□□□□□ -0.48
TMPO-212	ENST00000556029	SPIB	Q01892	262 aa		12.04	□□□□□ -0.48
TMPO-212	ENST00000556029	LIPE	Q05469	1076 aa		12.04	□□□□□ -0.48
TMPO-212	ENST00000556029	PAQR3	Q6TCH7	311 aa		12.04	□□□□□ -0.48
TMPO-212	ENST00000556029	KRT73	Q86Y46	540 aa		12.04	□□□□□ -0.48
TMPO-212	ENST00000556029	C1orf74	Q96LT6	269 aa		12.04	□□□□□ -0.48
TMPO-212	ENST00000556029	ANKRD60	Q9BZ19	345 aa		12.04	□□□□□ -0.48
TMPO-212	ENST00000556029	OSBPL6	Q9BZF3	934 aa		12.04	□□□□□ -0.48
TMPO-212	ENST00000556029	ARMC1	Q9NVT9	282 aa		12.04	□□□□□ -0.48
TMPO-212	ENST00000556029	FNIP2	Q9P278	1114 aa		12.04	□□□□□ -0.48
TMPO-212	ENST00000556029	CPSF4L	A6NMK7	179 aa	Known RBP	12.04	□□□□□ -0.48
TMPO-212	ENST00000556029	CLIC3	O95833	236 aa		12.04	□□□□□ -0.48
TMPO-212	ENST00000556029	NR2F1	P10589	423 aa		12.04	□□□□□ -0.48
TMPO-212	ENST00000556029	CDK4	P11802	303 aa		12.04	□□□□□ -0.48
TMPO-212	ENST00000556029	FDXR	P22570	491 aa		12.04	□□□□□ -0.48
TMPO-212	ENST00000556029	TUBA4A	P68366	448 aa		12.04	□□□□□ -0.48
TMPO-212	ENST00000556029	MTAP	Q13126	283 aa		12.04	□□□□□ -0.48
TMPO-212	ENST00000556029	COL9A2	Q14055	689 aa	Predicted RBP	12.04	□□□□□ -0.48
TMPO-212	ENST00000556029	PARP15	Q460N3	678 aa		12.04	□□□□□ -0.48
TMPO-212	ENST00000556029	RABL3	Q5HYI8	236 aa		12.04	□□□□□ -0.48
TMPO-212	ENST00000556029	CDC73	Q6P1J9	531 aa		12.04	□□□□□ -0.48
TMPO-212	ENST00000556029	RBM38	Q9H0Z9	239 aa	Known RBP	12.04	□□□□□ -0.48
TMPO-212	ENST00000556029	TFB2M	Q9H5Q4	396 aa	Known RBP	12.04	□□□□□ -0.48
TMPO-212	ENST00000556029	OLAH	Q9NV23	265 aa		12.04	□□□□□ -0.48
TMPO-212	ENST00000556029	SMOX	Q9NWM0	555 aa		12.04	□□□□□ -0.48
TMPO-212	ENST00000556029	AHSP	Q9NZD4	102 aa		12.04	□□□□□ -0.48
TMPO-212	ENST00000556029	ACTR3B	Q9P1U1	418 aa		12.04	□□□□□ -0.48
TMPO-212	ENST00000556029	MALT1	Q9UDY8	824 aa		12.04	□□□□□ -0.48

Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms