RNA–Protein interactions for RNA: ENST00000555964.5

XRCC3-215, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-215ENST00000555964 NLE1Q9NVX2 485 aaPredicted RBP16.35■□□□□ 0.21
XRCC3-215ENST00000555964 SMARCAL1Q9NZC9 954 aa16.35■□□□□ 0.21
XRCC3-215ENST00000555964 PLCL2Q9UPR0 1127 aa16.35■□□□□ 0.21
XRCC3-215ENST00000555964 PCSK5Q92824 1860 aa16.35■□□□□ 0.21
XRCC3-215ENST00000555964 CCDC78A2IDD5 438 aa16.34■□□□□ 0.21
XRCC3-215ENST00000555964 AGPSO00116 658 aa16.34■□□□□ 0.21
XRCC3-215ENST00000555964 CCL22O00626 93 aa16.34■□□□□ 0.21
XRCC3-215ENST00000555964 AP2A1O95782 977 aa16.34■□□□□ 0.21
XRCC3-215ENST00000555964 DCTP40126 519 aa16.34■□□□□ 0.21
XRCC3-215ENST00000555964 ARSFP54793 590 aa16.34■□□□□ 0.21
XRCC3-215ENST00000555964 PER3P56645 1201 aa16.34■□□□□ 0.21
XRCC3-215ENST00000555964 KIR2DS3Q14952 304 aa16.34■□□□□ 0.21
XRCC3-215ENST00000555964 DEFB110Q30KQ9 67 aa16.34■□□□□ 0.21
XRCC3-215ENST00000555964 P3H1Q32P28 736 aa16.34■□□□□ 0.21
XRCC3-215ENST00000555964 DENND5AQ6IQ26 1287 aa16.34■□□□□ 0.21
XRCC3-215ENST00000555964 MRPL14Q6P1L8 145 aaKnown RBP16.34■□□□□ 0.21
XRCC3-215ENST00000555964 PACS1Q6VY07 963 aa16.34■□□□□ 0.21
XRCC3-215ENST00000555964 Q6ZS92 163 aa16.34■□□□□ 0.21
XRCC3-215ENST00000555964 TRIM73Q86UV7 250 aa16.34■□□□□ 0.21
XRCC3-215ENST00000555964 CCDC170Q8IYT3 715 aa16.34■□□□□ 0.21
XRCC3-215ENST00000555964 OR5AR1Q8NGP9 310 aa16.34■□□□□ 0.21
XRCC3-215ENST00000555964 UBE2Q2Q8WVN8 375 aa16.34■□□□□ 0.21
XRCC3-215ENST00000555964 FKBP10Q96AY3 582 aa16.34■□□□□ 0.21
XRCC3-215ENST00000555964 WDR77Q9BQA1 342 aaPredicted RBP16.34■□□□□ 0.21
XRCC3-215ENST00000555964 FAM60AQ9NP50 221 aa16.34■□□□□ 0.21
XRCC3-215ENST00000555964 TDRKHQ9Y2W6 561 aaKnown RBP16.34■□□□□ 0.21
XRCC3-215ENST00000555964 PCDHGA10Q9Y5H3 936 aa16.34■□□□□ 0.21
XRCC3-215ENST00000555964 ITPR2Q14571 2701 aa16.34■□□□□ 0.21
XRCC3-215ENST00000555964 GOLGA6L9A6NEM1 432 aa16.33■□□□□ 0.2
XRCC3-215ENST00000555964 ISM1B1AKI9 464 aa16.33■□□□□ 0.2
XRCC3-215ENST00000555964 H3BMH7 237 aa16.33■□□□□ 0.2
XRCC3-215ENST00000555964 PSMD3O43242 534 aa16.33■□□□□ 0.2
XRCC3-215ENST00000555964 RPN2P04844 631 aa16.33■□□□□ 0.2
XRCC3-215ENST00000555964 PTMAP06454 111 aaKnown RBP16.33■□□□□ 0.2
XRCC3-215ENST00000555964 OR56A5P0C7T3 313 aa16.33■□□□□ 0.2
XRCC3-215ENST00000555964 ITGA3P26006 1051 aa16.33■□□□□ 0.2
XRCC3-215ENST00000555964 GLRBP48167 497 aa16.33■□□□□ 0.2
XRCC3-215ENST00000555964 DBN1Q16643 649 aa16.33■□□□□ 0.2
XRCC3-215ENST00000555964 YOD1Q5VVQ6 348 aaPredicted RBP16.33■□□□□ 0.2
XRCC3-215ENST00000555964 PPP1R32Q7Z5V6 425 aa16.33■□□□□ 0.2
XRCC3-215ENST00000555964 KLHDC8BQ8IXV7 354 aa16.33■□□□□ 0.2
XRCC3-215ENST00000555964 CLDN19Q8N6F1 224 aa16.33■□□□□ 0.2
XRCC3-215ENST00000555964 ST6GALNAC3Q8NDV1 305 aa16.33■□□□□ 0.2
XRCC3-215ENST00000555964 PPP4R1Q8TF05 950 aa16.33■□□□□ 0.2
XRCC3-215ENST00000555964 SLC22A18Q96BI1 424 aa16.33■□□□□ 0.2
XRCC3-215ENST00000555964 CDKN2AIPNLQ96HQ2 116 aa16.33■□□□□ 0.2
XRCC3-215ENST00000555964 TSSK1BQ9BXA7 367 aa16.33■□□□□ 0.2
XRCC3-215ENST00000555964 SPRTNQ9H040 489 aaPredicted RBP16.33■□□□□ 0.2
XRCC3-215ENST00000555964 MRM3Q9HC36 420 aaKnown RBP16.33■□□□□ 0.2
XRCC3-215ENST00000555964 INTS7Q9NVH2 962 aaKnown RBP16.33■□□□□ 0.2
XRCC3-215ENST00000555964 DHCR7Q9UBM7 475 aaKnown RBP16.33■□□□□ 0.2
XRCC3-215ENST00000555964 CDYLQ9Y232 598 aa16.33■□□□□ 0.2
XRCC3-215ENST00000555964 PCDHA3Q9Y5H8 950 aa16.33■□□□□ 0.2
XRCC3-215ENST00000555964 PCDHA13Q9Y5I0 950 aa16.33■□□□□ 0.2
XRCC3-215ENST00000555964 CENPEQ02224 2701 aa16.32■□□□□ 0.2
XRCC3-215ENST00000555964 IPO7O95373 1038 aaKnown RBP16.32■□□□□ 0.2
XRCC3-215ENST00000555964 CLDN1O95832 211 aa16.32■□□□□ 0.2
XRCC3-215ENST00000555964 ALBP02768 609 aa16.32■□□□□ 0.2
XRCC3-215ENST00000555964 ACADLP28330 430 aa16.32■□□□□ 0.2
XRCC3-215ENST00000555964 CYLC1P35663 651 aaPredicted RBP16.32■□□□□ 0.2
XRCC3-215ENST00000555964 GABRA4P48169 554 aa16.32■□□□□ 0.2
XRCC3-215ENST00000555964 CDKN1CP49918 316 aaPredicted RBP16.32■□□□□ 0.2
XRCC3-215ENST00000555964 RWDD2BP57060 319 aa16.32■□□□□ 0.2
XRCC3-215ENST00000555964 SPARCL1Q14515 664 aa16.32■□□□□ 0.2
XRCC3-215ENST00000555964 ZIC1Q15915 447 aa16.32■□□□□ 0.2
XRCC3-215ENST00000555964 PARP6Q2NL67 630 aa16.32■□□□□ 0.2
XRCC3-215ENST00000555964 ZNF787Q6DD87 383 aa16.32■□□□□ 0.2
XRCC3-215ENST00000555964 SLC34A3Q8N130 599 aa16.32■□□□□ 0.2
XRCC3-215ENST00000555964 BARD1Q99728 777 aaKnown RBP16.32■□□□□ 0.2
XRCC3-215ENST00000555964 WDR54Q9H977 334 aa16.32■□□□□ 0.2
XRCC3-215ENST00000555964 NXT1Q9UKK6 140 aaKnown RBP16.32■□□□□ 0.2
XRCC3-215ENST00000555964 A0A1B0GX78 115 aa16.31■□□□□ 0.2
XRCC3-215ENST00000555964 GAS8O95995 478 aa16.31■□□□□ 0.2
XRCC3-215ENST00000555964 ITGAXP20702 1163 aa16.31■□□□□ 0.2
XRCC3-215ENST00000555964 ALAS2P22557 587 aa16.31■□□□□ 0.2
XRCC3-215ENST00000555964 MMP11P24347 488 aa16.31■□□□□ 0.2
XRCC3-215ENST00000555964 MSNP26038 577 aaKnown RBP16.31■□□□□ 0.2
XRCC3-215ENST00000555964 PPARGP37231 505 aaPredicted RBP16.31■□□□□ 0.2
XRCC3-215ENST00000555964 RAB28P51157 221 aa16.31■□□□□ 0.2
XRCC3-215ENST00000555964 POU6F1Q14863 301 aa16.31■□□□□ 0.2
XRCC3-215ENST00000555964 SLC9A5Q14940 896 aa16.31■□□□□ 0.2
XRCC3-215ENST00000555964 DNAJC21Q5F1R6 531 aaKnown RBP16.31■□□□□ 0.2
XRCC3-215ENST00000555964 AGAP7PQ5VUJ5 663 aa16.31■□□□□ 0.2
XRCC3-215ENST00000555964 PRAMEF13Q5VWM6 474 aa16.31■□□□□ 0.2
XRCC3-215ENST00000555964 B3GNTL1Q67FW5 361 aaPredicted RBP16.31■□□□□ 0.2
XRCC3-215ENST00000555964 KCTD11Q693B1 232 aa16.31■□□□□ 0.2
XRCC3-215ENST00000555964 LINC00523Q86TU6 105 aa16.31■□□□□ 0.2
XRCC3-215ENST00000555964 DNAJC22Q8N4W6 341 aa16.31■□□□□ 0.2
XRCC3-215ENST00000555964 AGAP4Q96P64 663 aa16.31■□□□□ 0.2
XRCC3-215ENST00000555964 NRTNQ99748 197 aa16.31■□□□□ 0.2
XRCC3-215ENST00000555964 EPS8L2Q9H6S3 715 aa16.31■□□□□ 0.2
XRCC3-215ENST00000555964 SPHK1Q9NYA1 384 aa16.31■□□□□ 0.2
XRCC3-215ENST00000555964 EURLQ9NYK6 297 aa16.31■□□□□ 0.2
XRCC3-215ENST00000555964 CDC23Q9UJX2 597 aa16.31■□□□□ 0.2
XRCC3-215ENST00000555964 FKBP9O95302 570 aa16.3■□□□□ 0.2
XRCC3-215ENST00000555964 UMODP07911 640 aa16.3■□□□□ 0.2
XRCC3-215ENST00000555964 ATXN8OSP0DMR3 200 aa16.3■□□□□ 0.2
XRCC3-215ENST00000555964 NAP1L1P55209 391 aaKnown RBP16.3■□□□□ 0.2
XRCC3-215ENST00000555964 ZC3H12BQ5HYM0 836 aaKnown RBP16.3■□□□□ 0.2
XRCC3-215ENST00000555964 CRB2Q5IJ48 1285 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms