RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 PRMT5O14744 637 aaPredicted RBP12.25□□□□□ -0.45
HNRNPC-221ENST00000555883 ZSCAN9O15535 394 aaPredicted RBP12.25□□□□□ -0.45
HNRNPC-221ENST00000555883 OR1I1O60431 355 aa12.25□□□□□ -0.45
HNRNPC-221ENST00000555883 KLF7O75840 302 aaPredicted RBP12.25□□□□□ -0.45
HNRNPC-221ENST00000555883 OR2B3O76000 313 aa12.25□□□□□ -0.45
HNRNPC-221ENST00000555883 SLCO2B1O94956 709 aa12.25□□□□□ -0.45
HNRNPC-221ENST00000555883 IGHEP01854 428 aa12.25□□□□□ -0.45
HNRNPC-221ENST00000555883 APOA4P06727 396 aa12.25□□□□□ -0.45
HNRNPC-221ENST00000555883 PKLRP30613 574 aa12.25□□□□□ -0.45
HNRNPC-221ENST00000555883 CCR7P32248 378 aa12.25□□□□□ -0.45
HNRNPC-221ENST00000555883 GRIA1P42261 906 aa12.25□□□□□ -0.45
HNRNPC-221ENST00000555883 SSPNQ14714 243 aa12.25□□□□□ -0.45
HNRNPC-221ENST00000555883 ZIC1Q15915 447 aa12.25□□□□□ -0.45
HNRNPC-221ENST00000555883 KYNUQ16719 465 aa12.25□□□□□ -0.45
HNRNPC-221ENST00000555883 MICALCLQ6ZW33 695 aa12.25□□□□□ -0.45
HNRNPC-221ENST00000555883 LRRC6Q86X45 466 aa12.25□□□□□ -0.45
HNRNPC-221ENST00000555883 RAB43Q86YS6 212 aa12.25□□□□□ -0.45
HNRNPC-221ENST00000555883 DCUN1D3Q8IWE4 304 aa12.25□□□□□ -0.45
HNRNPC-221ENST00000555883 DNAJC22Q8N4W6 341 aa12.25□□□□□ -0.45
HNRNPC-221ENST00000555883 TAB3Q8N5C8 712 aaPredicted RBP12.25□□□□□ -0.45
HNRNPC-221ENST00000555883 PPHLN1Q8NEY8 458 aaKnown RBP12.25□□□□□ -0.45
HNRNPC-221ENST00000555883 OR6P1Q8NGX9 317 aa12.25□□□□□ -0.45
HNRNPC-221ENST00000555883 DENND1AQ8TEH3 1009 aa12.25□□□□□ -0.45
HNRNPC-221ENST00000555883 GBP5Q96PP8 586 aa12.25□□□□□ -0.45
HNRNPC-221ENST00000555883 NRTNQ99748 197 aa12.25□□□□□ -0.45
HNRNPC-221ENST00000555883 IL22Q9GZX6 179 aa12.25□□□□□ -0.45
HNRNPC-221ENST00000555883 FAM60AQ9NP50 221 aa12.25□□□□□ -0.45
HNRNPC-221ENST00000555883 SPHK1Q9NYA1 384 aa12.25□□□□□ -0.45
HNRNPC-221ENST00000555883 ANAPC5Q9UJX4 755 aa12.25□□□□□ -0.45
HNRNPC-221ENST00000555883 GUCA1BQ9UMX6 200 aa12.25□□□□□ -0.45
HNRNPC-221ENST00000555883 PLCL2Q9UPR0 1127 aa12.25□□□□□ -0.45
HNRNPC-221ENST00000555883 TDRKHQ9Y2W6 561 aaKnown RBP12.25□□□□□ -0.45
HNRNPC-221ENST00000555883 MRFAP1Q9Y605 127 aa12.25□□□□□ -0.45
HNRNPC-221ENST00000555883 KPNA5O15131 536 aa12.24□□□□□ -0.45
HNRNPC-221ENST00000555883 KLHL41O60662 606 aa12.24□□□□□ -0.45
HNRNPC-221ENST00000555883 DPM1O60762 260 aa12.24□□□□□ -0.45
HNRNPC-221ENST00000555883 SORBS2O94875 1100 aaKnown RBP12.24□□□□□ -0.45
HNRNPC-221ENST00000555883 S1PR4O95977 384 aa12.24□□□□□ -0.45
HNRNPC-221ENST00000555883 VARSP26640 1264 aaKnown RBP12.24□□□□□ -0.45
HNRNPC-221ENST00000555883 AOAHP28039 575 aa12.24□□□□□ -0.45
HNRNPC-221ENST00000555883 GCGRP47871 477 aa12.24□□□□□ -0.45
HNRNPC-221ENST00000555883 CCL11P51671 97 aa12.24□□□□□ -0.45
HNRNPC-221ENST00000555883 DCDP81605 110 aaKnown RBP12.24□□□□□ -0.45
HNRNPC-221ENST00000555883 CDK16Q00536 496 aa12.24□□□□□ -0.45
HNRNPC-221ENST00000555883 SRSF1Q07955 248 aaKnown RBP eCLIP12.24□□□□□ -0.451e-8■■■□□ 14.8
HNRNPC-221ENST00000555883 BRD3Q15059 726 aa12.24□□□□□ -0.45
HNRNPC-221ENST00000555883 RPS6KA1Q15418 735 aa12.24□□□□□ -0.45
HNRNPC-221ENST00000555883 SIX1Q15475 284 aaPredicted RBP12.24□□□□□ -0.45
HNRNPC-221ENST00000555883 PTCHD3Q3KNS1 767 aa12.24□□□□□ -0.45
HNRNPC-221ENST00000555883 FAM26EQ8N5C1 309 aa12.24□□□□□ -0.45
HNRNPC-221ENST00000555883 ZBTB2Q8N680 514 aa12.24□□□□□ -0.45
HNRNPC-221ENST00000555883 GALNT11Q8NCW6 608 aa12.24□□□□□ -0.45
HNRNPC-221ENST00000555883 MAIP1Q8WWC4 291 aa12.24□□□□□ -0.45
HNRNPC-221ENST00000555883 C1orf54Q8WWF1 131 aa12.24□□□□□ -0.45
HNRNPC-221ENST00000555883 COL26A1Q96A83 441 aa12.24□□□□□ -0.45
HNRNPC-221ENST00000555883 PANX3Q96QZ0 392 aa12.24□□□□□ -0.45
HNRNPC-221ENST00000555883 SMAD5Q99717 465 aaKnown RBP12.24□□□□□ -0.45
HNRNPC-221ENST00000555883 RAB11FIP5Q9BXF6 653 aa12.24□□□□□ -0.45
HNRNPC-221ENST00000555883 KLHL25Q9H0H3 589 aa12.24□□□□□ -0.45
HNRNPC-221ENST00000555883 P2RY12Q9H244 342 aa12.24□□□□□ -0.45
HNRNPC-221ENST00000555883 MRM3Q9HC36 420 aaKnown RBP12.24□□□□□ -0.45
HNRNPC-221ENST00000555883 TREX1Q9NSU2 369 aa12.24□□□□□ -0.45
HNRNPC-221ENST00000555883 CATSPERZQ9NTU4 200 aa12.24□□□□□ -0.45
HNRNPC-221ENST00000555883 C5AR2Q9P296 337 aa12.24□□□□□ -0.45
HNRNPC-221ENST00000555883 ANKMY1Q9P2S6 941 aa12.24□□□□□ -0.45
HNRNPC-221ENST00000555883 PLAAQ9Y263 795 aa12.24□□□□□ -0.45
HNRNPC-221ENST00000555883 ONECUT2O95948 504 aa12.23□□□□□ -0.45
HNRNPC-221ENST00000555883 CD9P21926 228 aa12.23□□□□□ -0.45
HNRNPC-221ENST00000555883 RPS3P23396 243 aaKnown RBP eCLIP12.23□□□□□ -0.453e-12■□□□□ 11
HNRNPC-221ENST00000555883 PEBP1P30086 187 aaKnown RBP12.23□□□□□ -0.45
HNRNPC-221ENST00000555883 RPL22P35268 128 aaKnown RBP12.23□□□□□ -0.45
HNRNPC-221ENST00000555883 NPY2RP49146 381 aa12.23□□□□□ -0.45
HNRNPC-221ENST00000555883 ADARP55265 1226 aaKnown RBP12.23□□□□□ -0.45
HNRNPC-221ENST00000555883 SOX8P57073 446 aa12.23□□□□□ -0.45
HNRNPC-221ENST00000555883 HSPA14Q0VDF9 509 aa12.23□□□□□ -0.45
HNRNPC-221ENST00000555883 CHAF1BQ13112 559 aa12.23□□□□□ -0.45
HNRNPC-221ENST00000555883 SEMA3AQ14563 771 aa12.23□□□□□ -0.45
HNRNPC-221ENST00000555883 TMED2Q15363 201 aa12.23□□□□□ -0.45
HNRNPC-221ENST00000555883 YOD1Q5VVQ6 348 aaPredicted RBP12.23□□□□□ -0.45
HNRNPC-221ENST00000555883 MRPL14Q6P1L8 145 aaKnown RBP12.23□□□□□ -0.45
HNRNPC-221ENST00000555883 MRGPREQ86SM8 312 aa12.23□□□□□ -0.45
HNRNPC-221ENST00000555883 TRIM73Q86UV7 250 aa12.23□□□□□ -0.45
HNRNPC-221ENST00000555883 LINC01555Q8NAE3 123 aa12.23□□□□□ -0.45
HNRNPC-221ENST00000555883 SPC24Q8NBT2 197 aa12.23□□□□□ -0.45
HNRNPC-221ENST00000555883 OR2Y1Q8NGV0 311 aa12.23□□□□□ -0.45
HNRNPC-221ENST00000555883 OR2L8Q8NGY9 312 aa12.23□□□□□ -0.45
HNRNPC-221ENST00000555883 HMGCLL1Q8TB92 370 aa12.23□□□□□ -0.45
HNRNPC-221ENST00000555883 DLG3Q92796 817 aa12.23□□□□□ -0.45
HNRNPC-221ENST00000555883 FKBP10Q96AY3 582 aa12.23□□□□□ -0.45
HNRNPC-221ENST00000555883 FER1L6-AS2Q96M78 137 aa12.23□□□□□ -0.45
HNRNPC-221ENST00000555883 CHRAC1Q9NRG0 131 aa12.23□□□□□ -0.45
HNRNPC-221ENST00000555883 HOMER3Q9NSC5 361 aa12.23□□□□□ -0.45
HNRNPC-221ENST00000555883 INTS7Q9NVH2 962 aaKnown RBP12.23□□□□□ -0.45
HNRNPC-221ENST00000555883 GPR83Q9NYM4 423 aa12.23□□□□□ -0.45
HNRNPC-221ENST00000555883 GNPTGQ9UJJ9 305 aa12.23□□□□□ -0.45
HNRNPC-221ENST00000555883 KLK4Q9Y5K2 254 aa12.23□□□□□ -0.45
HNRNPC-221ENST00000555883 PIKFYVEQ9Y2I7 2098 aa12.22□□□□□ -0.45
HNRNPC-221ENST00000555883 TTLL8A6PVC2 850 aa12.22□□□□□ -0.45
HNRNPC-221ENST00000555883 ISM1B1AKI9 464 aa12.22□□□□□ -0.45
HNRNPC-221ENST00000555883 TARM1B6A8C7 271 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms