RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 CSRP2Q16527 193 aa5.84□□□□□ -1.47
VPS33B-203ENST00000554264 LRRC36Q1X8D7 754 aa5.84□□□□□ -1.47
VPS33B-203ENST00000554264 FAM83EQ2M2I3 478 aa5.84□□□□□ -1.47
VPS33B-203ENST00000554264 MYLK3Q32MK0 819 aa5.84□□□□□ -1.47
VPS33B-203ENST00000554264 LSM12Q3MHD2 195 aaKnown RBP5.84□□□□□ -1.47
VPS33B-203ENST00000554264 SLC9B1Q4ZJI4 515 aa5.84□□□□□ -1.47
VPS33B-203ENST00000554264 PDCD4Q53EL6 469 aaKnown RBP5.84□□□□□ -1.47
VPS33B-203ENST00000554264 PCID2Q5JVF3 399 aa5.84□□□□□ -1.47
VPS33B-203ENST00000554264 SYCP2LQ5T4T6 812 aa5.84□□□□□ -1.47
VPS33B-203ENST00000554264 AGAP9Q5VTM2 703 aa5.84□□□□□ -1.47
VPS33B-203ENST00000554264 IL31Q6EBC2 164 aa5.84□□□□□ -1.47
VPS33B-203ENST00000554264 TRNP1Q6NT89 227 aa5.84□□□□□ -1.47
VPS33B-203ENST00000554264 PPP4R4Q6NUP7 873 aa5.84□□□□□ -1.47
VPS33B-203ENST00000554264 PMF1Q6P1K2 205 aa5.84□□□□□ -1.47
VPS33B-203ENST00000554264 NOTUMQ6P988 496 aa5.84□□□□□ -1.47
VPS33B-203ENST00000554264 TSSK4Q6SA08 328 aa5.84□□□□□ -1.47
VPS33B-203ENST00000554264 FRA10AC1Q70Z53 315 aa5.84□□□□□ -1.47
VPS33B-203ENST00000554264 LPCAT2Q7L5N7 544 aa5.84□□□□□ -1.47
VPS33B-203ENST00000554264 EFL1Q7Z2Z2 1120 aaKnown RBP5.84□□□□□ -1.47
VPS33B-203ENST00000554264 BNIPLQ7Z465 357 aa5.84□□□□□ -1.47
VPS33B-203ENST00000554264 PATL1Q86TB9 770 aaKnown RBP5.84□□□□□ -1.47
VPS33B-203ENST00000554264 THNSL2Q86YJ6 484 aa5.84□□□□□ -1.47
VPS33B-203ENST00000554264 PELI3Q8N2H9 469 aa5.84□□□□□ -1.47
VPS33B-203ENST00000554264 MPP5Q8N3R9 675 aa5.84□□□□□ -1.47
VPS33B-203ENST00000554264 CHCHD4Q8N4Q1 142 aa5.84□□□□□ -1.47
VPS33B-203ENST00000554264 AADATQ8N5Z0 425 aa5.84□□□□□ -1.47
VPS33B-203ENST00000554264 KIAA1958Q8N8K9 716 aa5.84□□□□□ -1.47
VPS33B-203ENST00000554264 DNAAF3Q8N9W5 541 aa5.84□□□□□ -1.47
VPS33B-203ENST00000554264 PPHLN1Q8NEY8 458 aaKnown RBP5.84□□□□□ -1.47
VPS33B-203ENST00000554264 ZFP28Q8NHY6 868 aa5.84□□□□□ -1.47
VPS33B-203ENST00000554264 UBA3Q8TBC4 463 aa5.84□□□□□ -1.47
VPS33B-203ENST00000554264 DNASE1L2Q92874 299 aa5.84□□□□□ -1.47
VPS33B-203ENST00000554264 NT5C3BQ969T7 300 aa5.84□□□□□ -1.47
VPS33B-203ENST00000554264 RCN3Q96D15 328 aa5.84□□□□□ -1.47
VPS33B-203ENST00000554264 PGAP3Q96FM1 320 aaPredicted RBP5.84□□□□□ -1.47
VPS33B-203ENST00000554264 C16orf92Q96LL3 132 aa5.84□□□□□ -1.47
VPS33B-203ENST00000554264 RDH12Q96NR8 316 aa5.84□□□□□ -1.47
VPS33B-203ENST00000554264 TSGA13Q96PP4 275 aa5.84□□□□□ -1.47
VPS33B-203ENST00000554264 PLEKHG4BQ96PX9 1271 aa5.84□□□□□ -1.47
VPS33B-203ENST00000554264 TWNKQ96RR1 684 aa5.84□□□□□ -1.47
VPS33B-203ENST00000554264 KXD1Q9BQD3 176 aa5.84□□□□□ -1.47
VPS33B-203ENST00000554264 BCL7BQ9BQE9 202 aa5.84□□□□□ -1.47
VPS33B-203ENST00000554264 TTPALQ9BTX7 342 aa5.84□□□□□ -1.47
VPS33B-203ENST00000554264 GATA5Q9BWX5 397 aaPredicted RBP5.84□□□□□ -1.47
VPS33B-203ENST00000554264 TMEM168Q9H0V1 697 aa5.84□□□□□ -1.47
VPS33B-203ENST00000554264 TASP1Q9H6P5 420 aa5.84□□□□□ -1.47
VPS33B-203ENST00000554264 UGT1A7Q9HAW7 530 aa5.84□□□□□ -1.47
VPS33B-203ENST00000554264 UGT1A10Q9HAW8 530 aa5.84□□□□□ -1.47
VPS33B-203ENST00000554264 UGT1A8Q9HAW9 530 aa5.84□□□□□ -1.47
VPS33B-203ENST00000554264 SEMA4GQ9NTN9 838 aa5.84□□□□□ -1.47
VPS33B-203ENST00000554264 GID8Q9NWU2 228 aa5.84□□□□□ -1.47
VPS33B-203ENST00000554264 GDAP2Q9NXN4 497 aa5.84□□□□□ -1.47
VPS33B-203ENST00000554264 GDE1Q9NZC3 331 aa5.84□□□□□ -1.47
VPS33B-203ENST00000554264 UBQLN1Q9UMX0 589 aaKnown RBP5.84□□□□□ -1.47
VPS33B-203ENST00000554264 B3GNT3Q9Y2A9 372 aa5.84□□□□□ -1.47
VPS33B-203ENST00000554264 WDR37Q9Y2I8 494 aa5.84□□□□□ -1.47
VPS33B-203ENST00000554264 GIT1Q9Y2X7 761 aa5.84□□□□□ -1.47
VPS33B-203ENST00000554264 NDUFAF1Q9Y375 327 aa5.84□□□□□ -1.47
VPS33B-203ENST00000554264 IPPQ9Y573 584 aa5.84□□□□□ -1.47
VPS33B-203ENST00000554264 ASB1Q9Y576 335 aa5.84□□□□□ -1.47
VPS33B-203ENST00000554264 CEPT1Q9Y6K0 416 aa5.84□□□□□ -1.47
VPS33B-203ENST00000554264 DOCK8Q8NF50 2099 aa5.84□□□□□ -1.47
VPS33B-203ENST00000554264 MIA3Q5JRA6 1907 aa5.84□□□□□ -1.48
VPS33B-203ENST00000554264 PATJQ8NI35 1801 aa5.83□□□□□ -1.48
VPS33B-203ENST00000554264 A0A0J9YVX5 310 aa5.83□□□□□ -1.48
VPS33B-203ENST00000554264 ZCWPW2A0A1B0GU75 182 aa5.83□□□□□ -1.48
VPS33B-203ENST00000554264 MROH6A6NGR9 719 aa5.83□□□□□ -1.48
VPS33B-203ENST00000554264 KRTAP9-7A8MTY7 169 aa5.83□□□□□ -1.48
VPS33B-203ENST00000554264 F8W810 466 aa5.83□□□□□ -1.48
VPS33B-203ENST00000554264 H0YAE9 185 aa5.83□□□□□ -1.48
VPS33B-203ENST00000554264 PSMD12O00232 456 aaPredicted RBP5.83□□□□□ -1.48
VPS33B-203ENST00000554264 EEF2KO00418 725 aaKnown RBP5.83□□□□□ -1.48
VPS33B-203ENST00000554264 DCLK1O15075 740 aa5.83□□□□□ -1.48
VPS33B-203ENST00000554264 TRIM24O15164 1050 aa5.83□□□□□ -1.48
VPS33B-203ENST00000554264 CCL16O15467 120 aa5.83□□□□□ -1.48
VPS33B-203ENST00000554264 ZSCAN9O15535 394 aaPredicted RBP5.83□□□□□ -1.48
VPS33B-203ENST00000554264 GRID2O43424 1007 aa5.83□□□□□ -1.48
VPS33B-203ENST00000554264 MFSD11O43934 449 aa5.83□□□□□ -1.48
VPS33B-203ENST00000554264 CACNG3O60359 315 aa5.83□□□□□ -1.48
VPS33B-203ENST00000554264 KATNA1O75449 491 aa5.83□□□□□ -1.48
VPS33B-203ENST00000554264 CYP7B1O75881 506 aa5.83□□□□□ -1.48
VPS33B-203ENST00000554264 PIAS1O75925 651 aa5.83□□□□□ -1.48
VPS33B-203ENST00000554264 PIGNO95427 931 aa5.83□□□□□ -1.48
VPS33B-203ENST00000554264 TDGF1P13385 188 aa5.83□□□□□ -1.48
VPS33B-203ENST00000554264 ENO3P13929 434 aaPredicted RBP5.83□□□□□ -1.48
VPS33B-203ENST00000554264 HSD17B1P14061 328 aa5.83□□□□□ -1.48
VPS33B-203ENST00000554264 XRCC1P18887 633 aaPredicted RBP5.83□□□□□ -1.48
VPS33B-203ENST00000554264 CYP3A5P20815 502 aa5.83□□□□□ -1.48
VPS33B-203ENST00000554264 MYF6P23409 242 aa5.83□□□□□ -1.48
VPS33B-203ENST00000554264 PSMA4P25789 261 aaKnown RBP5.83□□□□□ -1.48
VPS33B-203ENST00000554264 PSMB4P28070 264 aa5.83□□□□□ -1.48
VPS33B-203ENST00000554264 MASP1P48740 699 aa5.83□□□□□ -1.48
VPS33B-203ENST00000554264 SULT1E1P49888 294 aa5.83□□□□□ -1.48
VPS33B-203ENST00000554264 LIMK1P53667 647 aa5.83□□□□□ -1.48
VPS33B-203ENST00000554264 SLC12A2P55011 1212 aa5.83□□□□□ -1.48
VPS33B-203ENST00000554264 CDH8P55286 799 aa5.83□□□□□ -1.48
VPS33B-203ENST00000554264 ATP6V0D1P61421 351 aa5.83□□□□□ -1.48
VPS33B-203ENST00000554264 NTHL1P78549 312 aa5.83□□□□□ -1.48
VPS33B-203ENST00000554264 NFKB2Q00653 900 aa5.83□□□□□ -1.48
VPS33B-203ENST00000554264 GALNT2Q10471 571 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms