RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 NR1D2Q14995 579 aa3.41□□□□□ -1.86
SCFD1-210ENST00000553693 HLA-BQ31612 363 aa3.41□□□□□ -1.86
SCFD1-210ENST00000553693 C2CD6Q53TS8 623 aa3.41□□□□□ -1.86
SCFD1-210ENST00000553693 HAUS3Q68CZ6 603 aa3.41□□□□□ -1.86
SCFD1-210ENST00000553693 SUSD1Q6UWL2 747 aa3.41□□□□□ -1.86
SCFD1-210ENST00000553693 ADGRF2Q8IZF7 708 aa3.41□□□□□ -1.86
SCFD1-210ENST00000553693 C1orf131Q8NDD1 294 aaKnown RBP3.41□□□□□ -1.86
SCFD1-210ENST00000553693 MOSPD2Q8NHP6 518 aa3.41□□□□□ -1.86
SCFD1-210ENST00000553693 USP28Q96RU2 1077 aa3.41□□□□□ -1.86
SCFD1-210ENST00000553693 PIGQQ9BRB3 760 aa3.41□□□□□ -1.86
SCFD1-210ENST00000553693 TMX4Q9H1E5 349 aaPredicted RBP3.41□□□□□ -1.86
SCFD1-210ENST00000553693 ARRDC1-AS1Q9H2J1 176 aa3.41□□□□□ -1.86
SCFD1-210ENST00000553693 CCDC177Q9NQR7 707 aaPredicted RBP3.41□□□□□ -1.86
SCFD1-210ENST00000553693 SDR39U1Q9NRG7 319 aaPredicted RBP3.41□□□□□ -1.86
SCFD1-210ENST00000553693 RHCGQ9UBD6 479 aa3.41□□□□□ -1.86
SCFD1-210ENST00000553693 EPHA6Q9UF33 1036 aa3.41□□□□□ -1.86
SCFD1-210ENST00000553693 MOB4Q9Y3A3 225 aa3.41□□□□□ -1.86
SCFD1-210ENST00000553693 ZHX2Q9Y6X8 837 aa3.41□□□□□ -1.86
SCFD1-210ENST00000553693 POGZQ7Z3K3 1410 aa3.41□□□□□ -1.86
SCFD1-210ENST00000553693 DENND4BO75064 1496 aaPredicted RBP3.41□□□□□ -1.86
SCFD1-210ENST00000553693 RAPGEF2Q9Y4G8 1499 aa3.41□□□□□ -1.86
SCFD1-210ENST00000553693 IGKV6D-41A0A0C4DH26 115 aa3.4□□□□□ -1.87
SCFD1-210ENST00000553693 LNP1A1A4G5 178 aa3.4□□□□□ -1.87
SCFD1-210ENST00000553693 HYKKA2RU49 373 aa3.4□□□□□ -1.87
SCFD1-210ENST00000553693 PTPRTO14522 1441 aa3.4□□□□□ -1.87
SCFD1-210ENST00000553693 DFFBO76075 338 aa3.4□□□□□ -1.87
SCFD1-210ENST00000553693 MBD4O95243 580 aa3.4□□□□□ -1.87
SCFD1-210ENST00000553693 ACADSP16219 412 aa3.4□□□□□ -1.87
SCFD1-210ENST00000553693 HSPA1LP34931 641 aa3.4□□□□□ -1.87
SCFD1-210ENST00000553693 FHOD3Q2V2M9 1422 aa3.4□□□□□ -1.87
SCFD1-210ENST00000553693 TMCO3Q6UWJ1 677 aa3.4□□□□□ -1.87
SCFD1-210ENST00000553693 AKNAQ7Z591 1439 aa3.4□□□□□ -1.87
SCFD1-210ENST00000553693 FAM114A1Q8IWE2 563 aa3.4□□□□□ -1.87
SCFD1-210ENST00000553693 MAPKAPK5-AS1Q8N8E1 139 aa3.4□□□□□ -1.87
SCFD1-210ENST00000553693 TRIML1Q8N9V2 468 aa3.4□□□□□ -1.87
SCFD1-210ENST00000553693 EVI5LQ96CN4 794 aa3.4□□□□□ -1.87
SCFD1-210ENST00000553693 OR6C1Q96RD1 312 aa3.4□□□□□ -1.87
SCFD1-210ENST00000553693 SRSF8Q9BRL6 282 aaKnown RBP3.4□□□□□ -1.87
SCFD1-210ENST00000553693 GPATCH1Q9BRR8 931 aaKnown RBP3.4□□□□□ -1.87
SCFD1-210ENST00000553693 C16orf70Q9BSU1 422 aa3.4□□□□□ -1.87
SCFD1-210ENST00000553693 LMF2Q9BU23 707 aaKnown RBP3.4□□□□□ -1.87
SCFD1-210ENST00000553693 RPS10P5Q9NQ39 176 aa3.4□□□□□ -1.87
SCFD1-210ENST00000553693 TAB2Q9NYJ8 693 aa3.4□□□□□ -1.87
SCFD1-210ENST00000553693 LRWD1Q9UFC0 647 aa3.4□□□□□ -1.87
SCFD1-210ENST00000553693 KLK13Q9UKR3 277 aa3.4□□□□□ -1.87
SCFD1-210ENST00000553693 CSAG2Q9Y5P2 127 aa3.4□□□□□ -1.87
SCFD1-210ENST00000553693 FANCAO15360 1455 aa3.4□□□□□ -1.87
SCFD1-210ENST00000553693 TTC37Q6PGP7 1564 aa3.39□□□□□ -1.87
SCFD1-210ENST00000553693 PI4KAP2A4QPH2 592 aa3.39□□□□□ -1.87
SCFD1-210ENST00000553693 MSGN1A6NI15 193 aa3.39□□□□□ -1.87
SCFD1-210ENST00000553693 DUS4LO95620 317 aaKnown RBP3.39□□□□□ -1.87
SCFD1-210ENST00000553693 CD4P01730 458 aa3.39□□□□□ -1.87
SCFD1-210ENST00000553693 UGT1A4P22310 534 aa3.39□□□□□ -1.87
SCFD1-210ENST00000553693 SHC1P29353 583 aa3.39□□□□□ -1.87
SCFD1-210ENST00000553693 TLX1P31314 330 aaPredicted RBP3.39□□□□□ -1.87
SCFD1-210ENST00000553693 HNF4AP41235 474 aa3.39□□□□□ -1.87
SCFD1-210ENST00000553693 MFAP4P55083 255 aa3.39□□□□□ -1.87
SCFD1-210ENST00000553693 SIRPAP78324 504 aa3.39□□□□□ -1.87
SCFD1-210ENST00000553693 CXCL9Q07325 125 aa3.39□□□□□ -1.87
SCFD1-210ENST00000553693 DMPKQ09013 629 aa3.39□□□□□ -1.87
SCFD1-210ENST00000553693 RIGQ13278 110 aa3.39□□□□□ -1.87
SCFD1-210ENST00000553693 DRP2Q13474 957 aa3.39□□□□□ -1.87
SCFD1-210ENST00000553693 GRAPQ13588 217 aa3.39□□□□□ -1.87
SCFD1-210ENST00000553693 RAPSNQ13702 412 aa3.39□□□□□ -1.87
SCFD1-210ENST00000553693 ENPP2Q13822 863 aa3.39□□□□□ -1.87
SCFD1-210ENST00000553693 GLIPR1L2Q4G1C9 344 aa3.39□□□□□ -1.87
SCFD1-210ENST00000553693 TMED8Q6PL24 325 aaPredicted RBP3.39□□□□□ -1.87
SCFD1-210ENST00000553693 PAQR6Q6TCH4 344 aa3.39□□□□□ -1.87
SCFD1-210ENST00000553693 IL27RAQ6UWB1 636 aa3.39□□□□□ -1.87
SCFD1-210ENST00000553693 HAUS6Q7Z4H7 955 aa3.39□□□□□ -1.87
SCFD1-210ENST00000553693 ERC1Q8IUD2 1116 aa3.39□□□□□ -1.87
SCFD1-210ENST00000553693 LACC1Q8IV20 430 aa3.39□□□□□ -1.87
SCFD1-210ENST00000553693 DCLK2Q8N568 766 aa3.39□□□□□ -1.87
SCFD1-210ENST00000553693 OLIG1Q8TAK6 271 aa3.39□□□□□ -1.87
SCFD1-210ENST00000553693 CCDC107Q8WV48 283 aa3.39□□□□□ -1.87
SCFD1-210ENST00000553693 LRRC59Q96AG4 307 aaKnown RBP3.39□□□□□ -1.87
SCFD1-210ENST00000553693 BTBD10Q9BSF8 475 aa3.39□□□□□ -1.87
SCFD1-210ENST00000553693 DGCR6LQ9BY27 220 aa3.39□□□□□ -1.87
SCFD1-210ENST00000553693 FTOQ9C0B1 505 aaKnown RBP eCLIP3.39□□□□□ -1.87
SCFD1-210ENST00000553693 WWTR1Q9GZV5 400 aa3.39□□□□□ -1.87
SCFD1-210ENST00000553693 MAF1Q9H063 256 aa3.39□□□□□ -1.87
SCFD1-210ENST00000553693 UPF3AQ9H1J1 476 aaKnown RBP3.39□□□□□ -1.87
SCFD1-210ENST00000553693 SMARCAD1Q9H4L7 1026 aa3.39□□□□□ -1.87
SCFD1-210ENST00000553693 EIF2B3Q9NR50 452 aaKnown RBP3.39□□□□□ -1.87
SCFD1-210ENST00000553693 FGF21Q9NSA1 209 aa3.39□□□□□ -1.87
SCFD1-210ENST00000553693 SPHK1Q9NYA1 384 aa3.39□□□□□ -1.87
SCFD1-210ENST00000553693 TERF2IPQ9NYB0 399 aa3.39□□□□□ -1.87
SCFD1-210ENST00000553693 LARSQ9P2J5 1176 aaKnown RBP3.39□□□□□ -1.87
SCFD1-210ENST00000553693 GOLGA3Q08378 1498 aa3.39□□□□□ -1.87
SCFD1-210ENST00000553693 IQSEC2Q5JU85 1478 aa3.39□□□□□ -1.87
SCFD1-210ENST00000553693 PREX1Q8TCU6 1659 aa3.39□□□□□ -1.87
SCFD1-210ENST00000553693 ZFYVE16Q7Z3T8 1539 aa3.39□□□□□ -1.87
SCFD1-210ENST00000553693 RICTORQ6R327 1708 aa3.39□□□□□ -1.87
SCFD1-210ENST00000553693 MED1Q15648 1581 aaPredicted RBP3.38□□□□□ -1.87
SCFD1-210ENST00000553693 UHRF1BP1Q6BDS2 1440 aa3.38□□□□□ -1.87
SCFD1-210ENST00000553693 PGPEP1LA6NFU8 196 aa3.38□□□□□ -1.87
SCFD1-210ENST00000553693 EPB41L2O43491 1005 aaKnown RBP3.38□□□□□ -1.87
SCFD1-210ENST00000553693 PRAMEF11O60813 436 aa3.38□□□□□ -1.87
SCFD1-210ENST00000553693 CLDN1O95832 211 aa3.38□□□□□ -1.87
SCFD1-210ENST00000553693 NKX2-1P43699 371 aaPredicted RBP3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms