RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 OSBPL9Q96SU4 736 aa12.52□□□□□ -0.41
ACTN1-207ENST00000553290 KLHL25Q9H0H3 589 aa12.52□□□□□ -0.41
ACTN1-207ENST00000553290 ACTL8Q9H568 366 aa12.52□□□□□ -0.41
ACTN1-207ENST00000553290 ACTR5Q9H9F9 607 aaPredicted RBP12.52□□□□□ -0.41
ACTN1-207ENST00000553290 XAB2Q9HCS7 855 aaKnown RBP12.52□□□□□ -0.41
ACTN1-207ENST00000553290 SPHK1Q9NYA1 384 aa12.52□□□□□ -0.41
ACTN1-207ENST00000553290 SAMD15Q9P1V8 674 aa12.52□□□□□ -0.41
ACTN1-207ENST00000553290 PLAGL1Q9UM63 463 aa12.52□□□□□ -0.41
ACTN1-207ENST00000553290 FARSAQ9Y285 508 aaKnown RBP12.52□□□□□ -0.41
ACTN1-207ENST00000553290 KCNMB2Q9Y691 235 aa12.52□□□□□ -0.41
ACTN1-207ENST00000553290 SPTA1P02549 2419 aa12.52□□□□□ -0.41
ACTN1-207ENST00000553290 FAM237BA0A1B0GVD1 139 aa12.51□□□□□ -0.41
ACTN1-207ENST00000553290 SDR42E2A6NKP2 422 aa12.51□□□□□ -0.41
ACTN1-207ENST00000553290 H3BMM5 538 aa12.51□□□□□ -0.41
ACTN1-207ENST00000553290 CES2O00748 559 aa12.51□□□□□ -0.41
ACTN1-207ENST00000553290 KIF5CO60282 957 aa12.51□□□□□ -0.41
ACTN1-207ENST00000553290 AVILO75366 819 aa12.51□□□□□ -0.41
ACTN1-207ENST00000553290 FURINP09958 794 aa12.51□□□□□ -0.41
ACTN1-207ENST00000553290 RAB40ALP0C0E4 278 aa12.51□□□□□ -0.41
ACTN1-207ENST00000553290 OGNP20774 298 aaKnown RBP12.51□□□□□ -0.41
ACTN1-207ENST00000553290 PKLRP30613 574 aa12.51□□□□□ -0.41
ACTN1-207ENST00000553290 FNTAP49354 379 aa12.51□□□□□ -0.41
ACTN1-207ENST00000553290 ADARP55265 1226 aaKnown RBP12.51□□□□□ -0.41
ACTN1-207ENST00000553290 UGT8Q16880 541 aa12.51□□□□□ -0.41
ACTN1-207ENST00000553290 TYSND1Q2T9J0 566 aa12.51□□□□□ -0.41
ACTN1-207ENST00000553290 ZNF789Q5FWF6 425 aa12.51□□□□□ -0.41
ACTN1-207ENST00000553290 PRAMEF17Q5VTA0 474 aa12.51□□□□□ -0.41
ACTN1-207ENST00000553290 ANKRD22Q5VYY1 191 aa12.51□□□□□ -0.41
ACTN1-207ENST00000553290 CES3Q6UWW8 571 aa12.51□□□□□ -0.41
ACTN1-207ENST00000553290 ATG14Q6ZNE5 492 aa12.51□□□□□ -0.41
ACTN1-207ENST00000553290 CAND1Q86VP6 1230 aaKnown RBP12.51□□□□□ -0.41
ACTN1-207ENST00000553290 FLVCR1-AS1Q8TAF5 88 aa12.51□□□□□ -0.41
ACTN1-207ENST00000553290 RAD51AP1Q96B01 352 aa12.51□□□□□ -0.41
ACTN1-207ENST00000553290 SLC22A18Q96BI1 424 aa12.51□□□□□ -0.41
ACTN1-207ENST00000553290 DPH2Q9BQC3 489 aaPredicted RBP12.51□□□□□ -0.41
ACTN1-207ENST00000553290 RAB11FIP5Q9BXF6 653 aa12.51□□□□□ -0.41
ACTN1-207ENST00000553290 SLC7A5P2Q9GIP4 190 aa12.51□□□□□ -0.41
ACTN1-207ENST00000553290 CHST8Q9H2A9 424 aa12.51□□□□□ -0.41
ACTN1-207ENST00000553290 VPS9D1Q9Y2B5 631 aa12.51□□□□□ -0.41
ACTN1-207ENST00000553290 NEU2Q9Y3R4 380 aa12.51□□□□□ -0.41
ACTN1-207ENST00000553290 GOLGA6L10A0A0M3HER8 536 aa12.5□□□□□ -0.41
ACTN1-207ENST00000553290 GOLGA8KD6RF30 607 aa12.5□□□□□ -0.41
ACTN1-207ENST00000553290 GOLGA8TH3BQL2 631 aa12.5□□□□□ -0.41
ACTN1-207ENST00000553290 ZNF749O43361 778 aa12.5□□□□□ -0.41
ACTN1-207ENST00000553290 SUV39H1O43463 412 aa12.5□□□□□ -0.41
ACTN1-207ENST00000553290 PHF2O75151 1096 aa12.5□□□□□ -0.41
ACTN1-207ENST00000553290 TMEM63AO94886 807 aa12.5□□□□□ -0.41
ACTN1-207ENST00000553290 FKBP9O95302 570 aa12.5□□□□□ -0.41
ACTN1-207ENST00000553290 ESR1P03372 595 aa12.5□□□□□ -0.41
ACTN1-207ENST00000553290 FMO4P31512 558 aa12.5□□□□□ -0.41
ACTN1-207ENST00000553290 RORAP35398 523 aa12.5□□□□□ -0.41
ACTN1-207ENST00000553290 KCTD19Q17RG1 926 aaPredicted RBP12.5□□□□□ -0.41
ACTN1-207ENST00000553290 CTSL3PQ5NE16 218 aa12.5□□□□□ -0.41
ACTN1-207ENST00000553290 NEPROQ6NW34 567 aa12.5□□□□□ -0.41
ACTN1-207ENST00000553290 TRIM73Q86UV7 250 aa12.5□□□□□ -0.41
ACTN1-207ENST00000553290 SYTL1Q8IYJ3 562 aa12.5□□□□□ -0.41
ACTN1-207ENST00000553290 RAB42Q8N4Z0 105 aa12.5□□□□□ -0.41
ACTN1-207ENST00000553290 LINC01555Q8NAE3 123 aa12.5□□□□□ -0.41
ACTN1-207ENST00000553290 OR2L8Q8NGY9 312 aa12.5□□□□□ -0.41
ACTN1-207ENST00000553290 COG1Q8WTW3 980 aa12.5□□□□□ -0.41
ACTN1-207ENST00000553290 SKA2Q8WVK7 121 aaPredicted RBP12.5□□□□□ -0.41
ACTN1-207ENST00000553290 THAP4Q8WY91 577 aa12.5□□□□□ -0.41
ACTN1-207ENST00000553290 LPGAT1Q92604 370 aa12.5□□□□□ -0.41
ACTN1-207ENST00000553290 ABHD17AQ96GS6 310 aa12.5□□□□□ -0.41
ACTN1-207ENST00000553290 FOPNLQ96NB1 174 aa12.5□□□□□ -0.41
ACTN1-207ENST00000553290 BIRC8Q96P09 236 aa12.5□□□□□ -0.41
ACTN1-207ENST00000553290 RUFY1Q96T51 708 aa12.5□□□□□ -0.41
ACTN1-207ENST00000553290 MENTQ9BUN1 341 aa12.5□□□□□ -0.41
ACTN1-207ENST00000553290 NLNQ9BYT8 704 aa12.5□□□□□ -0.41
ACTN1-207ENST00000553290 FAM60AQ9NP50 221 aa12.5□□□□□ -0.41
ACTN1-207ENST00000553290 PCMTD2Q9NV79 361 aa12.5□□□□□ -0.41
ACTN1-207ENST00000553290 SLC39A10Q9ULF5 831 aa12.5□□□□□ -0.41
ACTN1-207ENST00000553290 SNX12Q9UMY4 172 aa12.5□□□□□ -0.41
ACTN1-207ENST00000553290 MAN2B2Q9Y2E5 1009 aa12.5□□□□□ -0.41
ACTN1-207ENST00000553290 AP1M2Q9Y6Q5 423 aa12.5□□□□□ -0.41
ACTN1-207ENST00000553290 SEC16AO15027 2179 aa12.5□□□□□ -0.41
ACTN1-207ENST00000553290 SNRNP200O75643 2136 aaKnown RBP12.49□□□□□ -0.41
ACTN1-207ENST00000553290 BSNQ9UPA5 3926 aa12.49□□□□□ -0.41
ACTN1-207ENST00000553290 MKRN2OSH3BPM6 223 aa12.49□□□□□ -0.41
ACTN1-207ENST00000553290 RASGRF2O14827 1237 aa12.49□□□□□ -0.41
ACTN1-207ENST00000553290 RFPL1O75677 317 aa12.49□□□□□ -0.41
ACTN1-207ENST00000553290 OR2B3O76000 313 aa12.49□□□□□ -0.41
ACTN1-207ENST00000553290 C1orf105O95561 183 aa12.49□□□□□ -0.41
ACTN1-207ENST00000553290 S1PR4O95977 384 aa12.49□□□□□ -0.41
ACTN1-207ENST00000553290 AGXTP21549 392 aa12.49□□□□□ -0.41
ACTN1-207ENST00000553290 CD9P21926 228 aa12.49□□□□□ -0.41
ACTN1-207ENST00000553290 ATP5DP30049 168 aa12.49□□□□□ -0.41
ACTN1-207ENST00000553290 PEBP1P30086 187 aaKnown RBP12.49□□□□□ -0.41
ACTN1-207ENST00000553290 CCNFP41002 786 aa12.49□□□□□ -0.41
ACTN1-207ENST00000553290 GABRA4P48169 554 aa12.49□□□□□ -0.41
ACTN1-207ENST00000553290 PMS2P54278 862 aa12.49□□□□□ -0.41
ACTN1-207ENST00000553290 RPS18P62269 152 aaKnown RBP12.49□□□□□ -0.41
ACTN1-207ENST00000553290 NFKB2Q00653 900 aa12.49□□□□□ -0.41
ACTN1-207ENST00000553290 DHX34Q14147 1143 aaKnown RBP12.49□□□□□ -0.41
ACTN1-207ENST00000553290 GRB7Q14451 532 aa12.49□□□□□ -0.41
ACTN1-207ENST00000553290 ZIC1Q15915 447 aa12.49□□□□□ -0.41
ACTN1-207ENST00000553290 ANKRD20A4Q4UJ75 823 aa12.49□□□□□ -0.41
ACTN1-207ENST00000553290 TLDC1Q6P9B6 456 aa12.49□□□□□ -0.41
ACTN1-207ENST00000553290 TMEM135Q86UB9 458 aa12.49□□□□□ -0.41
ACTN1-207ENST00000553290 CILP2Q8IUL8 1156 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms