RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 NR4A2P43354 598 aa4.78□□□□□ -1.64
SCFD1-209ENST00000553280 MMP15P51511 669 aa4.78□□□□□ -1.64
SCFD1-209ENST00000553280 MFAP3P55082 362 aa4.78□□□□□ -1.64
SCFD1-209ENST00000553280 SLC20A2Q08357 652 aa4.78□□□□□ -1.64
SCFD1-209ENST00000553280 RPA4Q13156 261 aa4.78□□□□□ -1.64
SCFD1-209ENST00000553280 LASP1Q14847 261 aaKnown RBP4.78□□□□□ -1.64
SCFD1-209ENST00000553280 FUT11Q495W5 492 aa4.78□□□□□ -1.64
SCFD1-209ENST00000553280 OR7E24Q6IFN5 339 aa4.78□□□□□ -1.64
SCFD1-209ENST00000553280 C11orf87Q6NUJ2 197 aa4.78□□□□□ -1.64
SCFD1-209ENST00000553280 TMEM270Q6UE05 265 aa4.78□□□□□ -1.64
SCFD1-209ENST00000553280 PLXDC2Q6UX71 529 aa4.78□□□□□ -1.64
SCFD1-209ENST00000553280 RAD9BQ6WBX8 426 aa4.78□□□□□ -1.64
SCFD1-209ENST00000553280 NRARPQ7Z6K4 114 aa4.78□□□□□ -1.64
SCFD1-209ENST00000553280 SATL1Q86VE3 508 aa4.78□□□□□ -1.64
SCFD1-209ENST00000553280 ADHFE1Q8IWW8 467 aa4.78□□□□□ -1.64
SCFD1-209ENST00000553280 ODF3L1Q8IXM7 274 aa4.78□□□□□ -1.64
SCFD1-209ENST00000553280 SMRP1Q8NCR6 262 aa4.78□□□□□ -1.64
SCFD1-209ENST00000553280 SPATA20Q8TB22 786 aa4.78□□□□□ -1.64
SCFD1-209ENST00000553280 RIT1Q92963 219 aa4.78□□□□□ -1.64
SCFD1-209ENST00000553280 ATP6V0A1Q93050 837 aa4.78□□□□□ -1.64
SCFD1-209ENST00000553280 TMEM19Q96HH6 336 aa4.78□□□□□ -1.64
SCFD1-209ENST00000553280 RAD9AQ99638 391 aa4.78□□□□□ -1.64
SCFD1-209ENST00000553280 NEURL2Q9BR09 285 aa4.78□□□□□ -1.64
SCFD1-209ENST00000553280 C1QTNF7Q9BXJ2 289 aa4.78□□□□□ -1.64
SCFD1-209ENST00000553280 KLHL1Q9NR64 748 aa4.78□□□□□ -1.64
SCFD1-209ENST00000553280 IARS2Q9NSE4 1012 aaKnown RBP4.78□□□□□ -1.64
SCFD1-209ENST00000553280 MTUS1Q9ULD2 1270 aa4.78□□□□□ -1.64
SCFD1-209ENST00000553280 MYO6Q9UM54 1294 aa4.78□□□□□ -1.64
SCFD1-209ENST00000553280 ZNF587BE7ETH6 402 aa4.77□□□□□ -1.65
SCFD1-209ENST00000553280 PMS2P2O95744 297 aa4.77□□□□□ -1.65
SCFD1-209ENST00000553280 SLC16A8O95907 504 aa4.77□□□□□ -1.65
SCFD1-209ENST00000553280 TOMM40O96008 361 aa4.77□□□□□ -1.65
SCFD1-209ENST00000553280 PRSS2P07478 247 aa4.77□□□□□ -1.65
SCFD1-209ENST00000553280 ZNF23P17027 643 aa4.77□□□□□ -1.65
SCFD1-209ENST00000553280 LBPP18428 481 aa4.77□□□□□ -1.65
SCFD1-209ENST00000553280 MLLT10P55197 1068 aa4.77□□□□□ -1.65
SCFD1-209ENST00000553280 MTCP1P56278 107 aa4.77□□□□□ -1.65
SCFD1-209ENST00000553280 KIAA1024LP59773 190 aa4.77□□□□□ -1.65
SCFD1-209ENST00000553280 EGR4Q05215 589 aa4.77□□□□□ -1.65
SCFD1-209ENST00000553280 EEF1A2Q05639 463 aaKnown RBP4.77□□□□□ -1.65
SCFD1-209ENST00000553280 TEFQ10587 303 aa4.77□□□□□ -1.65
SCFD1-209ENST00000553280 VEZF1Q14119 521 aa4.77□□□□□ -1.65
SCFD1-209ENST00000553280 HLFQ16534 295 aa4.77□□□□□ -1.65
SCFD1-209ENST00000553280 LBHQ53QV2 105 aaPredicted RBP4.77□□□□□ -1.65
SCFD1-209ENST00000553280 NDUFAF5Q5TEU4 345 aa4.77□□□□□ -1.65
SCFD1-209ENST00000553280 CASC4Q6P4E1 433 aa4.77□□□□□ -1.65
SCFD1-209ENST00000553280 KCTD9Q7L273 389 aa4.77□□□□□ -1.65
SCFD1-209ENST00000553280 C1QL2Q7Z5L3 287 aa4.77□□□□□ -1.65
SCFD1-209ENST00000553280 PHLDB2Q86SQ0 1253 aa4.77□□□□□ -1.65
SCFD1-209ENST00000553280 NUDT13Q86X67 352 aa4.77□□□□□ -1.65
SCFD1-209ENST00000553280 FOXP4Q8IVH2 680 aaPredicted RBP4.77□□□□□ -1.65
SCFD1-209ENST00000553280 NDUFAF2Q8N183 169 aa4.77□□□□□ -1.65
SCFD1-209ENST00000553280 VANGL1Q8TAA9 524 aaPredicted RBP4.77□□□□□ -1.65
SCFD1-209ENST00000553280 ASB5Q8WWX0 329 aa4.77□□□□□ -1.65
SCFD1-209ENST00000553280 SEPT1Q8WYJ6 367 aa4.77□□□□□ -1.65
SCFD1-209ENST00000553280 CENPTQ96BT3 561 aa4.77□□□□□ -1.65
SCFD1-209ENST00000553280 SNRNP40Q96DI7 357 aaKnown RBP4.77□□□□□ -1.65
SCFD1-209ENST00000553280 MYADMQ96S97 322 aa4.77□□□□□ -1.65
SCFD1-209ENST00000553280 CACNG6Q9BXT2 260 aa4.77□□□□□ -1.65
SCFD1-209ENST00000553280 VN1R1Q9GZP7 353 aa4.77□□□□□ -1.65
SCFD1-209ENST00000553280 SLC5A7Q9GZV3 580 aa4.77□□□□□ -1.65
SCFD1-209ENST00000553280 UBTD1Q9HAC8 227 aa4.77□□□□□ -1.65
SCFD1-209ENST00000553280 TXNDC16Q9P2K2 825 aa4.77□□□□□ -1.65
SCFD1-209ENST00000553280 FBXL5Q9UKA1 691 aa4.77□□□□□ -1.65
SCFD1-209ENST00000553280 KCNS2Q9ULS6 477 aa4.77□□□□□ -1.65
SCFD1-209ENST00000553280 PCDHA7Q9UN72 937 aa4.77□□□□□ -1.65
SCFD1-209ENST00000553280 DLGAP4Q9Y2H0 992 aa4.77□□□□□ -1.65
SCFD1-209ENST00000553280 HEG1Q9ULI3 1381 aa4.77□□□□□ -1.65
SCFD1-209ENST00000553280 PCDH11YQ9BZA8 1340 aa4.76□□□□□ -1.65
SCFD1-209ENST00000553280 A0A0G2JNG1 304 aa4.76□□□□□ -1.65
SCFD1-209ENST00000553280 A0A1W2PPW3 197 aa4.76□□□□□ -1.65
SCFD1-209ENST00000553280 PPIP5K2O43314 1243 aa4.76□□□□□ -1.65
SCFD1-209ENST00000553280 LIPFP07098 398 aa4.76□□□□□ -1.65
SCFD1-209ENST00000553280 INHBAP08476 426 aa4.76□□□□□ -1.65
SCFD1-209ENST00000553280 UROSP10746 265 aa4.76□□□□□ -1.65
SCFD1-209ENST00000553280 MYL6BP14649 208 aa4.76□□□□□ -1.65
SCFD1-209ENST00000553280 ZNF12P17014 697 aa4.76□□□□□ -1.65
SCFD1-209ENST00000553280 ITGA2P17301 1181 aa4.76□□□□□ -1.65
SCFD1-209ENST00000553280 CD27P26842 260 aa4.76□□□□□ -1.65
SCFD1-209ENST00000553280 FRKP42685 505 aaPredicted RBP4.76□□□□□ -1.65
SCFD1-209ENST00000553280 CDX1P47902 265 aaPredicted RBP4.76□□□□□ -1.65
SCFD1-209ENST00000553280 CLK1P49759 484 aaKnown RBP4.76□□□□□ -1.65
SCFD1-209ENST00000553280 ADARP55265 1226 aaKnown RBP4.76□□□□□ -1.65
SCFD1-209ENST00000553280 CLDN15P56746 228 aa4.76□□□□□ -1.65
SCFD1-209ENST00000553280 RELQ04864 619 aaPredicted RBP4.76□□□□□ -1.65
SCFD1-209ENST00000553280 DLG1Q12959 904 aa4.76□□□□□ -1.65
SCFD1-209ENST00000553280 CBX3Q13185 183 aa4.76□□□□□ -1.65
SCFD1-209ENST00000553280 KIR2DS5Q14953 304 aa4.76□□□□□ -1.65
SCFD1-209ENST00000553280 SLC39A14Q15043 492 aa4.76□□□□□ -1.65
SCFD1-209ENST00000553280 RPS6KA1Q15418 735 aa4.76□□□□□ -1.65
SCFD1-209ENST00000553280 NPTX1Q15818 432 aa4.76□□□□□ -1.65
SCFD1-209ENST00000553280 MCMDC2Q4G0Z9 681 aa4.76□□□□□ -1.65
SCFD1-209ENST00000553280 LACTB2Q53H82 288 aaPredicted RBP4.76□□□□□ -1.65
SCFD1-209ENST00000553280 ZNF425Q6IV72 752 aa4.76□□□□□ -1.65
SCFD1-209ENST00000553280 C11orf63Q6NUN7 778 aa4.76□□□□□ -1.65
SCFD1-209ENST00000553280 PACS1Q6VY07 963 aa4.76□□□□□ -1.65
SCFD1-209ENST00000553280 ARHGAP22Q7Z5H3 698 aa4.76□□□□□ -1.65
SCFD1-209ENST00000553280 KMT5CQ86Y97 462 aa4.76□□□□□ -1.65
SCFD1-209ENST00000553280 SIAH3Q8IW03 269 aa4.76□□□□□ -1.65
SCFD1-209ENST00000553280 GPALPP1Q8IXQ4 340 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms