RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 DEFB110Q30KQ9 67 aa12.58□□□□□ -0.4
NPAS3-209ENST00000551008 CCSMST1Q4G0I0 132 aa12.58□□□□□ -0.4
NPAS3-209ENST00000551008 DNAJC21Q5F1R6 531 aaKnown RBP12.58□□□□□ -0.4
NPAS3-209ENST00000551008 KIAA0930Q6ICG6 404 aaPredicted RBP12.58□□□□□ -0.4
NPAS3-209ENST00000551008 CYB5D1Q6P9G0 228 aa12.58□□□□□ -0.4
NPAS3-209ENST00000551008 CENPUQ71F23 418 aa12.58□□□□□ -0.4
NPAS3-209ENST00000551008 TMEM126BQ8IUX1 230 aa12.58□□□□□ -0.4
NPAS3-209ENST00000551008 ADAMTS17Q8TE56 1095 aa12.58□□□□□ -0.4
NPAS3-209ENST00000551008 MAGOHBQ96A72 148 aaKnown RBP12.58□□□□□ -0.4
NPAS3-209ENST00000551008 OSBPL9Q96SU4 736 aa12.58□□□□□ -0.4
NPAS3-209ENST00000551008 TRIM55Q9BYV6 548 aa12.58□□□□□ -0.4
NPAS3-209ENST00000551008 TRIM4Q9C037 500 aa12.58□□□□□ -0.4
NPAS3-209ENST00000551008 CHRNA10Q9GZZ6 450 aa12.58□□□□□ -0.4
NPAS3-209ENST00000551008 HOMER3Q9NSC5 361 aa12.58□□□□□ -0.4
NPAS3-209ENST00000551008 OR6C2Q9NZP2 312 aa12.58□□□□□ -0.4
NPAS3-209ENST00000551008 BFARQ9NZS9 450 aa12.58□□□□□ -0.4
NPAS3-209ENST00000551008 MED16Q9Y2X0 877 aa12.58□□□□□ -0.4
NPAS3-209ENST00000551008 FLNCQ14315 2725 aa12.58□□□□□ -0.4
NPAS3-209ENST00000551008 DOCK10Q96BY6 2186 aa12.57□□□□□ -0.4
NPAS3-209ENST00000551008 RELNP78509 3460 aa12.57□□□□□ -0.4
NPAS3-209ENST00000551008 ZCWPW2A0A1B0GU75 182 aa12.57□□□□□ -0.4
NPAS3-209ENST00000551008 USP27XA6NNY8 438 aa12.57□□□□□ -0.4
NPAS3-209ENST00000551008 MEN1O00255 615 aa12.57□□□□□ -0.4
NPAS3-209ENST00000551008 SLC28A2O43868 658 aa12.57□□□□□ -0.4
NPAS3-209ENST00000551008 NIPSNAP2O75323 286 aa12.57□□□□□ -0.4
NPAS3-209ENST00000551008 RECKO95980 971 aa12.57□□□□□ -0.4
NPAS3-209ENST00000551008 NR1D1P20393 614 aa12.57□□□□□ -0.4
NPAS3-209ENST00000551008 PTPN4P29074 926 aa12.57□□□□□ -0.4
NPAS3-209ENST00000551008 GCGRP47871 477 aa12.57□□□□□ -0.4
NPAS3-209ENST00000551008 MC1RQ01726 317 aa12.57□□□□□ -0.4
NPAS3-209ENST00000551008 PLOD1Q02809 727 aaPredicted RBP12.57□□□□□ -0.4
NPAS3-209ENST00000551008 PTCHD3Q3KNS1 767 aa12.57□□□□□ -0.4
NPAS3-209ENST00000551008 AARS2Q5JTZ9 985 aaKnown RBP12.57□□□□□ -0.4
NPAS3-209ENST00000551008 TMTC4Q5T4D3 741 aa12.57□□□□□ -0.4
NPAS3-209ENST00000551008 CPZQ66K79 652 aa12.57□□□□□ -0.4
NPAS3-209ENST00000551008 ZNF449Q6P9G9 518 aa12.57□□□□□ -0.4
NPAS3-209ENST00000551008 PTRH1Q86Y79 214 aaKnown RBP12.57□□□□□ -0.4
NPAS3-209ENST00000551008 DENND1AQ8TEH3 1009 aa12.57□□□□□ -0.4
NPAS3-209ENST00000551008 APOBEC4Q8WW27 367 aaKnown RBP12.57□□□□□ -0.4
NPAS3-209ENST00000551008 ASZ1Q8WWH4 475 aa12.57□□□□□ -0.4
NPAS3-209ENST00000551008 ABHD17AQ96GS6 310 aa12.57□□□□□ -0.4
NPAS3-209ENST00000551008 PBKQ96KB5 322 aa12.57□□□□□ -0.4
NPAS3-209ENST00000551008 SERPINB12Q96P63 405 aa12.57□□□□□ -0.4
NPAS3-209ENST00000551008 SLC30A3Q99726 388 aa12.57□□□□□ -0.4
NPAS3-209ENST00000551008 POLG2Q9UHN1 485 aa12.57□□□□□ -0.4
NPAS3-209ENST00000551008 KCND3Q9UK17 655 aa12.57□□□□□ -0.4
NPAS3-209ENST00000551008 KLHL20Q9Y2M5 609 aa12.57□□□□□ -0.4
NPAS3-209ENST00000551008 A0A0J9YY10 115 aa12.56□□□□□ -0.4
NPAS3-209ENST00000551008 CDC14CA4D256 554 aa12.56□□□□□ -0.4
NPAS3-209ENST00000551008 FANCGO15287 622 aa12.56□□□□□ -0.4
NPAS3-209ENST00000551008 ZNF749O43361 778 aa12.56□□□□□ -0.4
NPAS3-209ENST00000551008 PHF2O75151 1096 aa12.56□□□□□ -0.4
NPAS3-209ENST00000551008 CNOT3O75175 753 aaKnown RBP12.56□□□□□ -0.4
NPAS3-209ENST00000551008 DNAJB5O75953 348 aa12.56□□□□□ -0.4
NPAS3-209ENST00000551008 PDGFAP04085 211 aa12.56□□□□□ -0.4
NPAS3-209ENST00000551008 CCNYL3P0C7X3 344 aa12.56□□□□□ -0.4
NPAS3-209ENST00000551008 BDKRB1P46663 353 aa12.56□□□□□ -0.4
NPAS3-209ENST00000551008 RAB28P51157 221 aa12.56□□□□□ -0.4
NPAS3-209ENST00000551008 EIF3BP55884 814 aaKnown RBP12.56□□□□□ -0.4
NPAS3-209ENST00000551008 ITGA1P56199 1179 aa12.56□□□□□ -0.4
NPAS3-209ENST00000551008 PDAP1Q13442 181 aaKnown RBP12.56□□□□□ -0.4
NPAS3-209ENST00000551008 UGT8Q16880 541 aa12.56□□□□□ -0.4
NPAS3-209ENST00000551008 SLC5A12Q1EHB4 618 aa12.56□□□□□ -0.4
NPAS3-209ENST00000551008 IZUMO3Q5VZ72 239 aa12.56□□□□□ -0.4
NPAS3-209ENST00000551008 CCDC137Q6PK04 289 aaKnown RBP12.56□□□□□ -0.4
NPAS3-209ENST00000551008 UNC5DQ6UXZ4 953 aa12.56□□□□□ -0.4
NPAS3-209ENST00000551008 PRICKLE2Q7Z3G6 844 aa12.56□□□□□ -0.4
NPAS3-209ENST00000551008 DCUN1D3Q8IWE4 304 aa12.56□□□□□ -0.4
NPAS3-209ENST00000551008 SYTL1Q8IYJ3 562 aa12.56□□□□□ -0.4
NPAS3-209ENST00000551008 DNAJC22Q8N4W6 341 aa12.56□□□□□ -0.4
NPAS3-209ENST00000551008 C2orf73Q8N5S3 287 aaPredicted RBP12.56□□□□□ -0.4
NPAS3-209ENST00000551008 NAT8LQ8N9F0 302 aa12.56□□□□□ -0.4
NPAS3-209ENST00000551008 MCUQ8NE86 351 aa12.56□□□□□ -0.4
NPAS3-209ENST00000551008 CFAP61Q8NHU2 1237 aa12.56□□□□□ -0.4
NPAS3-209ENST00000551008 GIMAP7Q8NHV1 300 aa12.56□□□□□ -0.4
NPAS3-209ENST00000551008 ACTRT1Q8TDG2 376 aa12.56□□□□□ -0.4
NPAS3-209ENST00000551008 MR1Q95460 341 aa12.56□□□□□ -0.4
NPAS3-209ENST00000551008 TTC1Q99614 292 aa12.56□□□□□ -0.4
NPAS3-209ENST00000551008 SPRTNQ9H040 489 aaPredicted RBP12.56□□□□□ -0.4
NPAS3-209ENST00000551008 ACTR5Q9H9F9 607 aaPredicted RBP12.56□□□□□ -0.4
NPAS3-209ENST00000551008 SYTL2Q9HCH5 934 aa12.56□□□□□ -0.4
NPAS3-209ENST00000551008 ZNF71Q9NQZ8 489 aaPredicted RBP12.56□□□□□ -0.4
NPAS3-209ENST00000551008 GNPTGQ9UJJ9 305 aa12.56□□□□□ -0.4
NPAS3-209ENST00000551008 SNX12Q9UMY4 172 aa12.56□□□□□ -0.4
NPAS3-209ENST00000551008 POLHQ9Y253 713 aa12.56□□□□□ -0.4
NPAS3-209ENST00000551008 PTPN13Q12923 2485 aa12.56□□□□□ -0.4
NPAS3-209ENST00000551008 SHANK1Q9Y566 2161 aa12.56□□□□□ -0.4
NPAS3-209ENST00000551008 FAM237BA0A1B0GVD1 139 aa12.55□□□□□ -0.4
NPAS3-209ENST00000551008 A0A1W2PPV9 198 aa12.55□□□□□ -0.4
NPAS3-209ENST00000551008 GOLGA8MH3BSY2 632 aa12.55□□□□□ -0.4
NPAS3-209ENST00000551008 AP3B1O00203 1094 aa12.55□□□□□ -0.4
NPAS3-209ENST00000551008 PGRMC1O00264 195 aaKnown RBP12.55□□□□□ -0.4
NPAS3-209ENST00000551008 RASGRF2O14827 1237 aa12.55□□□□□ -0.4
NPAS3-209ENST00000551008 NRP2O60462 931 aa12.55□□□□□ -0.4
NPAS3-209ENST00000551008 NDUFS3O75489 264 aa12.55□□□□□ -0.4
NPAS3-209ENST00000551008 C1orf105O95561 183 aa12.55□□□□□ -0.4
NPAS3-209ENST00000551008 S1PR4O95977 384 aa12.55□□□□□ -0.4
NPAS3-209ENST00000551008 APOA4P06727 396 aa12.55□□□□□ -0.4
NPAS3-209ENST00000551008 CBSLP0DN79 551 aa12.55□□□□□ -0.4
NPAS3-209ENST00000551008 SFTPCP11686 197 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms