RNA–Protein interactions for RNA: ENST00000550283.1

RAB5B-208, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5B, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-208ENST00000550283 TBC1D21Q8IYX1 336 aa10.86□□□□□ -0.67
RAB5B-208ENST00000550283 ZFPM2Q8WW38 1151 aa10.86□□□□□ -0.67
RAB5B-208ENST00000550283 ASZ1Q8WWH4 475 aa10.86□□□□□ -0.67
RAB5B-208ENST00000550283 LRRC39Q96DD0 335 aa10.86□□□□□ -0.67
RAB5B-208ENST00000550283 SLC41A2Q96JW4 573 aa10.86□□□□□ -0.67
RAB5B-208ENST00000550283 ZNF578Q96N58 590 aaPredicted RBP10.86□□□□□ -0.67
RAB5B-208ENST00000550283 TRIT1Q9H3H1 467 aaKnown RBP10.86□□□□□ -0.67
RAB5B-208ENST00000550283 SRMSQ9H3Y6 488 aa10.86□□□□□ -0.67
RAB5B-208ENST00000550283 EPB41L1Q9H4G0 881 aa10.86□□□□□ -0.67
RAB5B-208ENST00000550283 SYNPO2LQ9H987 977 aa10.86□□□□□ -0.67
RAB5B-208ENST00000550283 FAM60AQ9NP50 221 aa10.86□□□□□ -0.67
RAB5B-208ENST00000550283 PPANQ9NQ55 473 aaKnown RBP10.86□□□□□ -0.67
RAB5B-208ENST00000550283 SLC39A1Q9NY26 324 aa10.86□□□□□ -0.67
RAB5B-208ENST00000550283 ACTR10Q9NZ32 417 aa10.86□□□□□ -0.67
RAB5B-208ENST00000550283 ADAMTS6Q9UKP5 1117 aa10.86□□□□□ -0.67
RAB5B-208ENST00000550283 DHRS7Q9Y394 339 aa10.86□□□□□ -0.67
RAB5B-208ENST00000550283 UTP11Q9Y3A2 253 aaKnown RBP10.86□□□□□ -0.67
RAB5B-208ENST00000550283 HEBP2Q9Y5Z4 205 aa10.86□□□□□ -0.67
RAB5B-208ENST00000550283 COLEC10Q9Y6Z7 277 aa10.86□□□□□ -0.67
RAB5B-208ENST00000550283 MGAQ8IWI9 3026 aa10.86□□□□□ -0.67
RAB5B-208ENST00000550283 URB1O60287 2271 aaKnown RBP10.86□□□□□ -0.67
RAB5B-208ENST00000550283 A0A1W2PPV9 198 aa10.85□□□□□ -0.67
RAB5B-208ENST00000550283 TCRBV9S1A1TA0A576 114 aa10.85□□□□□ -0.67
RAB5B-208ENST00000550283 GSAPA4D1B5 854 aa10.85□□□□□ -0.67
RAB5B-208ENST00000550283 B4E171 279 aa10.85□□□□□ -0.67
RAB5B-208ENST00000550283 TMX2-CTNND1H3BSU7 103 aa10.85□□□□□ -0.67
RAB5B-208ENST00000550283 SMAPO00193 183 aa10.85□□□□□ -0.67
RAB5B-208ENST00000550283 NVLO15381 856 aaKnown RBP10.85□□□□□ -0.67
RAB5B-208ENST00000550283 PRICKLE3O43900 615 aaPredicted RBP10.85□□□□□ -0.67
RAB5B-208ENST00000550283 UGT2B7P16662 529 aa10.85□□□□□ -0.67
RAB5B-208ENST00000550283 NELFEP18615 380 aaKnown RBP10.85□□□□□ -0.67
RAB5B-208ENST00000550283 NDUFS1P28331 727 aa10.85□□□□□ -0.67
RAB5B-208ENST00000550283 RBMS1P29558 406 aaKnown RBP10.85□□□□□ -0.67
RAB5B-208ENST00000550283 TSPAN7P41732 249 aa10.85□□□□□ -0.67
RAB5B-208ENST00000550283 ERVPABLB-1P60509 514 aa10.85□□□□□ -0.67
RAB5B-208ENST00000550283 TLE3Q04726 772 aa10.85□□□□□ -0.67
RAB5B-208ENST00000550283 MGAT5Q09328 741 aa10.85□□□□□ -0.67
RAB5B-208ENST00000550283 CALCOCO2Q13137 446 aa10.85□□□□□ -0.67
RAB5B-208ENST00000550283 EIF3IQ13347 325 aaKnown RBP10.85□□□□□ -0.67
RAB5B-208ENST00000550283 FRG1Q14331 258 aaKnown RBP10.85□□□□□ -0.67
RAB5B-208ENST00000550283 GPR19Q15760 415 aa10.85□□□□□ -0.67
RAB5B-208ENST00000550283 ZXDCQ2QGD7 858 aaPredicted RBP10.85□□□□□ -0.67
RAB5B-208ENST00000550283 PAQR3Q6TCH7 311 aa10.85□□□□□ -0.67
RAB5B-208ENST00000550283 MBOAT1Q6ZNC8 495 aa10.85□□□□□ -0.67
RAB5B-208ENST00000550283 VASH2Q86V25 355 aa10.85□□□□□ -0.67
RAB5B-208ENST00000550283 ZC3HC1Q86WB0 502 aaKnown RBP10.85□□□□□ -0.67
RAB5B-208ENST00000550283 OOSP2Q86WS3 158 aa10.85□□□□□ -0.67
RAB5B-208ENST00000550283 GSDMBQ8TAX9 411 aa10.85□□□□□ -0.67
RAB5B-208ENST00000550283 EEF1AKMT1Q8WVE0 214 aa10.85□□□□□ -0.67
RAB5B-208ENST00000550283 KCNJ9Q92806 393 aa10.85□□□□□ -0.67
RAB5B-208ENST00000550283 PANX3Q96QZ0 392 aa10.85□□□□□ -0.67
RAB5B-208ENST00000550283 OR6C1Q96RD1 312 aa10.85□□□□□ -0.67
RAB5B-208ENST00000550283 DPYSL5Q9BPU6 564 aa10.85□□□□□ -0.67
RAB5B-208ENST00000550283 NAT9Q9BTE0 207 aa10.85□□□□□ -0.67
RAB5B-208ENST00000550283 PITPNM3Q9BZ71 974 aa10.85□□□□□ -0.67
RAB5B-208ENST00000550283 RAB17Q9H0T7 212 aa10.85□□□□□ -0.67
RAB5B-208ENST00000550283 AKIRIN1Q9H9L7 192 aaPredicted RBP10.85□□□□□ -0.67
RAB5B-208ENST00000550283 LRRC4CQ9HCJ2 640 aa10.85□□□□□ -0.67
RAB5B-208ENST00000550283 THSD1Q9NS62 852 aa10.85□□□□□ -0.67
RAB5B-208ENST00000550283 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.85□□□□□ -0.67
RAB5B-208ENST00000550283 PCDHGA7Q9Y5G6 932 aa10.85□□□□□ -0.67
RAB5B-208ENST00000550283 V9GYY5 206 aaPredicted RBP10.85□□□□□ -0.67
RAB5B-208ENST00000550283 SNRNP200O75643 2136 aaKnown RBP10.84□□□□□ -0.67
RAB5B-208ENST00000550283 TLCD2A6NGC4 264 aa10.84□□□□□ -0.67
RAB5B-208ENST00000550283 E5RI56 91 aa10.84□□□□□ -0.67
RAB5B-208ENST00000550283 PSIP1O75475 530 aaKnown RBP10.84□□□□□ -0.67
RAB5B-208ENST00000550283 FDXRP22570 491 aa10.84□□□□□ -0.67
RAB5B-208ENST00000550283 MAGEA4P43358 317 aa10.84□□□□□ -0.67
RAB5B-208ENST00000550283 GABRA4P48169 554 aa10.84□□□□□ -0.67
RAB5B-208ENST00000550283 PCBP4P57723 403 aaKnown RBP10.84□□□□□ -0.67
RAB5B-208ENST00000550283 TAS2R39P59534 338 aa10.84□□□□□ -0.67
RAB5B-208ENST00000550283 TMED2Q15363 201 aa10.84□□□□□ -0.67
RAB5B-208ENST00000550283 COL28A1Q2UY09 1125 aa10.84□□□□□ -0.67
RAB5B-208ENST00000550283 DEFB110Q30KQ9 67 aa10.84□□□□□ -0.67
RAB5B-208ENST00000550283 HECTD2Q5U5R9 776 aa10.84□□□□□ -0.67
RAB5B-208ENST00000550283 UNC5DQ6UXZ4 953 aa10.84□□□□□ -0.67
RAB5B-208ENST00000550283 STRA8Q7Z7C7 330 aa10.84□□□□□ -0.67
RAB5B-208ENST00000550283 DTX1Q86Y01 620 aa10.84□□□□□ -0.67
RAB5B-208ENST00000550283 CEP97Q8IW35 865 aa10.84□□□□□ -0.67
RAB5B-208ENST00000550283 TMEM151BQ8IW70 566 aa10.84□□□□□ -0.67
RAB5B-208ENST00000550283 DCUN1D3Q8IWE4 304 aa10.84□□□□□ -0.67
RAB5B-208ENST00000550283 BBOF1Q8ND07 529 aa10.84□□□□□ -0.67
RAB5B-208ENST00000550283 PPFIBP2Q8ND30 876 aa10.84□□□□□ -0.67
RAB5B-208ENST00000550283 CALML6Q8TD86 181 aa10.84□□□□□ -0.67
RAB5B-208ENST00000550283 PYROXD1Q8WU10 500 aa10.84□□□□□ -0.67
RAB5B-208ENST00000550283 SKA2Q8WVK7 121 aaPredicted RBP10.84□□□□□ -0.67
RAB5B-208ENST00000550283 ANKRD49Q8WVL7 239 aa10.84□□□□□ -0.67
RAB5B-208ENST00000550283 UBXN4Q92575 508 aa10.84□□□□□ -0.67
RAB5B-208ENST00000550283 ZDHHC12Q96GR4 267 aa10.84□□□□□ -0.67
RAB5B-208ENST00000550283 TRAPPC9Q96Q05 1148 aa10.84□□□□□ -0.67
RAB5B-208ENST00000550283 TAAR9Q96RI9 348 aa10.84□□□□□ -0.67
RAB5B-208ENST00000550283 PKP4Q99569 1192 aa10.84□□□□□ -0.67
RAB5B-208ENST00000550283 CAB39LQ9H9S4 337 aa10.84□□□□□ -0.67
RAB5B-208ENST00000550283 CPNE5Q9HCH3 593 aa10.84□□□□□ -0.67
RAB5B-208ENST00000550283 ACSL6Q9UKU0 697 aa10.84□□□□□ -0.67
RAB5B-208ENST00000550283 MTO1Q9Y2Z2 717 aaKnown RBP10.84□□□□□ -0.67
RAB5B-208ENST00000550283 PCDHGA3Q9Y5H0 932 aa10.84□□□□□ -0.67
RAB5B-208ENST00000550283 AHCTF1Q8WYP5 2266 aa10.83□□□□□ -0.68
RAB5B-208ENST00000550283 PIPSLA2A3N6 862 aa10.83□□□□□ -0.68
RAB5B-208ENST00000550283 CTAGE15A4D2H0 777 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms