RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 CCND1P24385 295 aa16.91■□□□□ 0.3
LETMD1-220ENST00000549686 SLC6A12P48065 614 aa16.91■□□□□ 0.3
LETMD1-220ENST00000549686 ZNF423Q2M1K9 1284 aa16.91■□□□□ 0.3
LETMD1-220ENST00000549686 UNC50Q53HI1 259 aa16.91■□□□□ 0.3
LETMD1-220ENST00000549686 SLC23A3Q6PIS1 610 aa16.91■□□□□ 0.3
LETMD1-220ENST00000549686 AGTRAPQ6RW13 159 aa16.91■□□□□ 0.3
LETMD1-220ENST00000549686 TRIM48Q8IWZ4 208 aa16.91■□□□□ 0.3
LETMD1-220ENST00000549686 ZNF548Q8NEK5 533 aaPredicted RBP16.91■□□□□ 0.3
LETMD1-220ENST00000549686 FAM46DQ8NEK8 389 aa16.91■□□□□ 0.3
LETMD1-220ENST00000549686 ZNF483Q8TF39 744 aaPredicted RBP16.91■□□□□ 0.3
LETMD1-220ENST00000549686 EPN3Q9H201 632 aa16.91■□□□□ 0.3
LETMD1-220ENST00000549686 SLC32A1Q9H598 525 aa16.91■□□□□ 0.3
LETMD1-220ENST00000549686 STOX2Q9P2F5 926 aaPredicted RBP16.91■□□□□ 0.3
LETMD1-220ENST00000549686 OPTCQ9UBM4 332 aa16.91■□□□□ 0.3
LETMD1-220ENST00000549686 PCTPQ9UKL6 214 aa16.91■□□□□ 0.3
LETMD1-220ENST00000549686 KMT2EQ8IZD2 1858 aa16.9■□□□□ 0.3
LETMD1-220ENST00000549686 OR52A4PA6NMU1 304 aa16.9■□□□□ 0.3
LETMD1-220ENST00000549686 KATNA1O75449 491 aa16.9■□□□□ 0.3
LETMD1-220ENST00000549686 SIX3O95343 332 aaPredicted RBP16.9■□□□□ 0.3
LETMD1-220ENST00000549686 HSPA4LO95757 839 aa16.9■□□□□ 0.3
LETMD1-220ENST00000549686 SLC16A8O95907 504 aa16.9■□□□□ 0.3
LETMD1-220ENST00000549686 ANXA6P08133 673 aa16.9■□□□□ 0.3
LETMD1-220ENST00000549686 SYPP08247 313 aa16.9■□□□□ 0.3
LETMD1-220ENST00000549686 ERGP11308 486 aa16.9■□□□□ 0.3
LETMD1-220ENST00000549686 IMPA1P29218 277 aa16.9■□□□□ 0.3
LETMD1-220ENST00000549686 HSPA7P48741 367 aa16.9■□□□□ 0.3
LETMD1-220ENST00000549686 HK2P52789 917 aa16.9■□□□□ 0.3
LETMD1-220ENST00000549686 PNLIPRP1P54315 467 aa16.9■□□□□ 0.3
LETMD1-220ENST00000549686 OCRLQ01968 901 aa16.9■□□□□ 0.3
LETMD1-220ENST00000549686 LCP2Q13094 533 aa16.9■□□□□ 0.3
LETMD1-220ENST00000549686 PRKAA1Q13131 559 aa16.9■□□□□ 0.3
LETMD1-220ENST00000549686 C1orf61Q13536 156 aa16.9■□□□□ 0.3
LETMD1-220ENST00000549686 CYP2A13Q16696 494 aa16.9■□□□□ 0.3
LETMD1-220ENST00000549686 SLC9B2Q86UD5 537 aa16.9■□□□□ 0.3
LETMD1-220ENST00000549686 CRLF3Q8IUI8 442 aa16.9■□□□□ 0.3
LETMD1-220ENST00000549686 OR56A3Q8NH54 315 aa16.9■□□□□ 0.3
LETMD1-220ENST00000549686 ZDHHC1Q8WTX9 485 aa16.9■□□□□ 0.3
LETMD1-220ENST00000549686 GRAMD1AQ96CP6 724 aa16.9■□□□□ 0.3
LETMD1-220ENST00000549686 CAMK1GQ96NX5 476 aa16.9■□□□□ 0.3
LETMD1-220ENST00000549686 TMEM79Q9BSE2 394 aa16.9■□□□□ 0.3
LETMD1-220ENST00000549686 HGH1Q9BTY7 390 aa16.9■□□□□ 0.3
LETMD1-220ENST00000549686 PITPNM3Q9BZ71 974 aa16.9■□□□□ 0.3
LETMD1-220ENST00000549686 IRF2BPLQ9H1B7 796 aa16.9■□□□□ 0.3
LETMD1-220ENST00000549686 GSTO2Q9H4Y5 243 aa16.9■□□□□ 0.3
LETMD1-220ENST00000549686 STN1Q9H668 368 aaKnown RBP16.9■□□□□ 0.3
LETMD1-220ENST00000549686 CAPN10Q9HC96 672 aa16.9■□□□□ 0.3
LETMD1-220ENST00000549686 SCHIP1Q9P0W5 487 aaPredicted RBP16.9■□□□□ 0.3
LETMD1-220ENST00000549686 TDRKHQ9Y2W6 561 aaKnown RBP16.9■□□□□ 0.3
LETMD1-220ENST00000549686 ANGPTL3Q9Y5C1 460 aa16.9■□□□□ 0.3
LETMD1-220ENST00000549686 CFAP20Q9Y6A4 193 aaKnown RBP16.9■□□□□ 0.3
LETMD1-220ENST00000549686 CEP192Q8TEP8 1941 aa16.9■□□□□ 0.3
LETMD1-220ENST00000549686 E2F3O00716 465 aa16.89■□□□□ 0.29
LETMD1-220ENST00000549686 GIPC1O14908 333 aa16.89■□□□□ 0.29
LETMD1-220ENST00000549686 YY2O15391 372 aa16.89■□□□□ 0.29
LETMD1-220ENST00000549686 EDF1O60869 148 aaKnown RBP16.89■□□□□ 0.29
LETMD1-220ENST00000549686 VIPP01282 170 aa16.89■□□□□ 0.29
LETMD1-220ENST00000549686 CFIP05156 583 aa16.89■□□□□ 0.29
LETMD1-220ENST00000549686 AGTR2P50052 363 aa16.89■□□□□ 0.29
LETMD1-220ENST00000549686 RAB28P51157 221 aa16.89■□□□□ 0.29
LETMD1-220ENST00000549686 UBE2IP63279 158 aaKnown RBP16.89■□□□□ 0.29
LETMD1-220ENST00000549686 CBX1P83916 185 aa16.89■□□□□ 0.29
LETMD1-220ENST00000549686 BNC1Q01954 994 aa16.89■□□□□ 0.29
LETMD1-220ENST00000549686 CLCQ05315 142 aa16.89■□□□□ 0.29
LETMD1-220ENST00000549686 GRIK2Q13002 908 aa16.89■□□□□ 0.29
LETMD1-220ENST00000549686 GRB7Q14451 532 aa16.89■□□□□ 0.29
LETMD1-220ENST00000549686 CCSMST1Q4G0I0 132 aa16.89■□□□□ 0.29
LETMD1-220ENST00000549686 ARL13AQ5H913 290 aaPredicted RBP16.89■□□□□ 0.29
LETMD1-220ENST00000549686 CAPN13Q6MZZ7 669 aaPredicted RBP16.89■□□□□ 0.29
LETMD1-220ENST00000549686 MBOAT1Q6ZNC8 495 aa16.89■□□□□ 0.29
LETMD1-220ENST00000549686 SYTL1Q8IYJ3 562 aa16.89■□□□□ 0.29
LETMD1-220ENST00000549686 SFRP1Q8N474 314 aa16.89■□□□□ 0.29
LETMD1-220ENST00000549686 HMGCLL1Q8TB92 370 aa16.89■□□□□ 0.29
LETMD1-220ENST00000549686 MAPK15Q8TD08 544 aa16.89■□□□□ 0.29
LETMD1-220ENST00000549686 ZNF480Q8WV37 535 aa16.89■□□□□ 0.29
LETMD1-220ENST00000549686 MAGEB10Q96LZ2 347 aaPredicted RBP16.89■□□□□ 0.29
LETMD1-220ENST00000549686 ILKAPQ9H0C8 392 aaPredicted RBP16.89■□□□□ 0.29
LETMD1-220ENST00000549686 PCBD2Q9H0N5 130 aa16.89■□□□□ 0.29
LETMD1-220ENST00000549686 ZNF624Q9P2J8 865 aaPredicted RBP16.89■□□□□ 0.29
LETMD1-220ENST00000549686 HAO1Q9UJM8 370 aa16.89■□□□□ 0.29
LETMD1-220ENST00000549686 RAP2CQ9Y3L5 183 aa16.89■□□□□ 0.29
LETMD1-220ENST00000549686 LRP4O75096 1905 aa16.89■□□□□ 0.29
LETMD1-220ENST00000549686 SPAG17Q6Q759 2223 aa16.89■□□□□ 0.29
LETMD1-220ENST00000549686 GON4LQ3T8J9 2241 aa16.88■□□□□ 0.29
LETMD1-220ENST00000549686 A0A1B0GTQ1 180 aa16.88■□□□□ 0.29
LETMD1-220ENST00000549686 CCNT2O60583 730 aaKnown RBP16.88■□□□□ 0.29
LETMD1-220ENST00000549686 TGDSO95455 350 aa16.88■□□□□ 0.29
LETMD1-220ENST00000549686 CER1O95813 267 aa16.88■□□□□ 0.29
LETMD1-220ENST00000549686 EML2O95834 649 aa16.88■□□□□ 0.29
LETMD1-220ENST00000549686 CELA2BP08218 269 aaPredicted RBP16.88■□□□□ 0.29
LETMD1-220ENST00000549686 EPB42P16452 691 aa16.88■□□□□ 0.29
LETMD1-220ENST00000549686 SHMT2P34897 504 aa16.88■□□□□ 0.29
LETMD1-220ENST00000549686 SLC19A1P41440 591 aa16.88■□□□□ 0.29
LETMD1-220ENST00000549686 PKNOX1P55347 436 aa16.88■□□□□ 0.29
LETMD1-220ENST00000549686 PRKG2Q13237 762 aa16.88■□□□□ 0.29
LETMD1-220ENST00000549686 GTF2H2Q13888 395 aa16.88■□□□□ 0.29
LETMD1-220ENST00000549686 TCEA2Q15560 299 aa16.88■□□□□ 0.29
LETMD1-220ENST00000549686 PTCHD3Q3KNS1 767 aa16.88■□□□□ 0.29
LETMD1-220ENST00000549686 LAIR1Q6GTX8 287 aa16.88■□□□□ 0.29
LETMD1-220ENST00000549686 GTF2H2CQ6P1K8 395 aa16.88■□□□□ 0.29
LETMD1-220ENST00000549686 DUS1LQ6P1R4 473 aaKnown RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms