RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 PTMAP06454 111 aaKnown RBP11.79□□□□□ -0.52
DDX54-206ENST00000549271 CCDC175P0C221 793 aa11.79□□□□□ -0.52
DDX54-206ENST00000549271 SLC35G4P0C7Q5 338 aa11.79□□□□□ -0.52
DDX54-206ENST00000549271 AKT1P31749 480 aa11.79□□□□□ -0.52
DDX54-206ENST00000549271 KPNA2P52292 529 aaKnown RBP11.79□□□□□ -0.52
DDX54-206ENST00000549271 ZNF140P52738 457 aaPredicted RBP11.79□□□□□ -0.52
DDX54-206ENST00000549271 NCF4Q15080 339 aa11.79□□□□□ -0.52
DDX54-206ENST00000549271 RPS6KA1Q15418 735 aa11.79□□□□□ -0.52
DDX54-206ENST00000549271 SIX1Q15475 284 aaPredicted RBP11.79□□□□□ -0.52
DDX54-206ENST00000549271 SEL1L2Q5TEA6 688 aa11.79□□□□□ -0.52
DDX54-206ENST00000549271 ARHGEF18Q6ZSZ5 1173 aa11.79□□□□□ -0.52
DDX54-206ENST00000549271 MICALCLQ6ZW33 695 aa11.79□□□□□ -0.52
DDX54-206ENST00000549271 CDH24Q86UP0 819 aa11.79□□□□□ -0.52
DDX54-206ENST00000549271 CLEC1AQ8NC01 280 aa11.79□□□□□ -0.52
DDX54-206ENST00000549271 OR13C4Q8NGS5 318 aa11.79□□□□□ -0.52
DDX54-206ENST00000549271 C1orf54Q8WWF1 131 aa11.79□□□□□ -0.52
DDX54-206ENST00000549271 FER1L6-AS2Q96M78 137 aa11.79□□□□□ -0.52
DDX54-206ENST00000549271 IP6K3Q96PC2 410 aa11.79□□□□□ -0.52
DDX54-206ENST00000549271 TRAPPC9Q96Q05 1148 aa11.79□□□□□ -0.52
DDX54-206ENST00000549271 WDR77Q9BQA1 342 aaPredicted RBP11.79□□□□□ -0.52
DDX54-206ENST00000549271 CCM2Q9BSQ5 444 aa11.79□□□□□ -0.52
DDX54-206ENST00000549271 C1GALT1Q9NS00 363 aa11.79□□□□□ -0.52
DDX54-206ENST00000549271 PCMTD2Q9NV79 361 aa11.79□□□□□ -0.52
DDX54-206ENST00000549271 FKBPLQ9UIM3 349 aa11.79□□□□□ -0.52
DDX54-206ENST00000549271 POMT2Q9UKY4 750 aa11.79□□□□□ -0.52
DDX54-206ENST00000549271 HEBP2Q9Y5Z4 205 aa11.79□□□□□ -0.52
DDX54-206ENST00000549271 CFAP20Q9Y6A4 193 aaKnown RBP11.79□□□□□ -0.52
DDX54-206ENST00000549271 CACNA1CQ13936 2221 aa11.78□□□□□ -0.52
DDX54-206ENST00000549271 C17orf113A0A1B0GUU1 675 aa11.78□□□□□ -0.52
DDX54-206ENST00000549271 OR6C74A6NCV1 312 aa11.78□□□□□ -0.52
DDX54-206ENST00000549271 KLF7O75840 302 aaPredicted RBP11.78□□□□□ -0.52
DDX54-206ENST00000549271 TPH1P17752 444 aa11.78□□□□□ -0.52
DDX54-206ENST00000549271 STIP1P31948 543 aaKnown RBP11.78□□□□□ -0.52
DDX54-206ENST00000549271 OTX2P32243 289 aa11.78□□□□□ -0.52
DDX54-206ENST00000549271 ABRQ12979 859 aa11.78□□□□□ -0.52
DDX54-206ENST00000549271 VWA2Q5GFL6 755 aa11.78□□□□□ -0.52
DDX54-206ENST00000549271 ARMC6Q6NXE6 501 aa11.78□□□□□ -0.52
DDX54-206ENST00000549271 DUS1LQ6P1R4 473 aaKnown RBP11.78□□□□□ -0.52
DDX54-206ENST00000549271 PARP9Q8IXQ6 854 aa11.78□□□□□ -0.52
DDX54-206ENST00000549271 SYTL1Q8IYJ3 562 aa11.78□□□□□ -0.52
DDX54-206ENST00000549271 ZNF808Q8N4W9 903 aaPredicted RBP11.78□□□□□ -0.52
DDX54-206ENST00000549271 TAB3Q8N5C8 712 aaPredicted RBP11.78□□□□□ -0.52
DDX54-206ENST00000549271 ACVR1CQ8NER5 493 aa11.78□□□□□ -0.52
DDX54-206ENST00000549271 SPDYE1Q8NFV5 336 aaPredicted RBP11.78□□□□□ -0.52
DDX54-206ENST00000549271 HM13Q8TCT9 377 aa11.78□□□□□ -0.52
DDX54-206ENST00000549271 PPP4R1Q8TF05 950 aa11.78□□□□□ -0.52
DDX54-206ENST00000549271 HEXDCQ8WVB3 486 aa11.78□□□□□ -0.52
DDX54-206ENST00000549271 RMDN2Q96LZ7 410 aa11.78□□□□□ -0.52
DDX54-206ENST00000549271 TLR10Q9BXR5 811 aa11.78□□□□□ -0.52
DDX54-206ENST00000549271 FRMD8P1Q9BZ68 369 aaPredicted RBP11.78□□□□□ -0.52
DDX54-206ENST00000549271 PITPNM3Q9BZ71 974 aa11.78□□□□□ -0.52
DDX54-206ENST00000549271 ASB8Q9H765 288 aa11.78□□□□□ -0.52
DDX54-206ENST00000549271 FEZ2Q9UHY8 353 aaPredicted RBP11.78□□□□□ -0.52
DDX54-206ENST00000549271 NCOA6Q14686 2063 aaPredicted RBP11.78□□□□□ -0.52
DDX54-206ENST00000549271 CCL22O00626 93 aa11.77□□□□□ -0.53
DDX54-206ENST00000549271 PSMD3O43242 534 aa11.77□□□□□ -0.53
DDX54-206ENST00000549271 CRTAMO95727 393 aa11.77□□□□□ -0.53
DDX54-206ENST00000549271 AP2A1O95782 977 aa11.77□□□□□ -0.53
DDX54-206ENST00000549271 IGHEP01854 428 aa11.77□□□□□ -0.53
DDX54-206ENST00000549271 RALBP11234 206 aa11.77□□□□□ -0.53
DDX54-206ENST00000549271 ETS1P14921 441 aa11.77□□□□□ -0.53
DDX54-206ENST00000549271 PSMA3P25788 255 aa11.77□□□□□ -0.53
DDX54-206ENST00000549271 PBLDP30039 288 aaPredicted RBP11.77□□□□□ -0.53
DDX54-206ENST00000549271 HADHAP40939 763 aa11.77□□□□□ -0.53
DDX54-206ENST00000549271 PRLHRP49683 370 aa11.77□□□□□ -0.53
DDX54-206ENST00000549271 TMPRSS15P98073 1019 aa11.77□□□□□ -0.53
DDX54-206ENST00000549271 PRKAA1Q13131 559 aa11.77□□□□□ -0.53
DDX54-206ENST00000549271 SNX1Q13596 522 aa11.77□□□□□ -0.53
DDX54-206ENST00000549271 SSPNQ14714 243 aa11.77□□□□□ -0.53
DDX54-206ENST00000549271 HIF1AQ16665 826 aa11.77□□□□□ -0.53
DDX54-206ENST00000549271 P3H1Q32P28 736 aa11.77□□□□□ -0.53
DDX54-206ENST00000549271 ZNF658BQ4V348 819 aaPredicted RBP11.77□□□□□ -0.53
DDX54-206ENST00000549271 ZNF789Q5FWF6 425 aa11.77□□□□□ -0.53
DDX54-206ENST00000549271 B3GNTL1Q67FW5 361 aaPredicted RBP11.77□□□□□ -0.53
DDX54-206ENST00000549271 IGFL2Q6UWQ7 119 aa11.77□□□□□ -0.53
DDX54-206ENST00000549271 DET1Q7L5Y6 550 aa11.77□□□□□ -0.53
DDX54-206ENST00000549271 MRGPRGQ86SM5 289 aa11.77□□□□□ -0.53
DDX54-206ENST00000549271 PRUNE1Q86TP1 453 aa11.77□□□□□ -0.53
DDX54-206ENST00000549271 COG1Q8WTW3 980 aa11.77□□□□□ -0.53
DDX54-206ENST00000549271 NAT14Q8WUY8 206 aa11.77□□□□□ -0.53
DDX54-206ENST00000549271 ULK4Q96C45 1275 aa11.77□□□□□ -0.53
DDX54-206ENST00000549271 CLIP3Q96DZ5 547 aa11.77□□□□□ -0.53
DDX54-206ENST00000549271 CCDC120Q96HB5 630 aa11.77□□□□□ -0.53
DDX54-206ENST00000549271 DHRS4Q9BTZ2 278 aa11.77□□□□□ -0.53
DDX54-206ENST00000549271 TFB2MQ9H5Q4 396 aaKnown RBP11.77□□□□□ -0.53
DDX54-206ENST00000549271 FAM96AQ9H5X1 160 aa11.77□□□□□ -0.53
DDX54-206ENST00000549271 LRRC40Q9H9A6 602 aa11.77□□□□□ -0.53
DDX54-206ENST00000549271 FANCEQ9HB96 536 aa11.77□□□□□ -0.53
DDX54-206ENST00000549271 ETNK1Q9HBU6 452 aa11.77□□□□□ -0.53
DDX54-206ENST00000549271 PIH1D1Q9NWS0 290 aaKnown RBP11.77□□□□□ -0.53
DDX54-206ENST00000549271 PADI2Q9Y2J8 665 aa11.77□□□□□ -0.53
DDX54-206ENST00000549271 PPP2R2CQ9Y2T4 447 aa11.77□□□□□ -0.53
DDX54-206ENST00000549271 IGLV3-16A0A075B6K0 115 aa11.76□□□□□ -0.53
DDX54-206ENST00000549271 SLC9B1P1A6NJY1 282 aa11.76□□□□□ -0.53
DDX54-206ENST00000549271 MASP2O00187 686 aa11.76□□□□□ -0.53
DDX54-206ENST00000549271 JRKO75564 520 aa11.76□□□□□ -0.53
DDX54-206ENST00000549271 CD1EP15812 388 aa11.76□□□□□ -0.53
DDX54-206ENST00000549271 POLR2CP19387 275 aaPredicted RBP11.76□□□□□ -0.53
DDX54-206ENST00000549271 CDH3P22223 829 aa11.76□□□□□ -0.53
DDX54-206ENST00000549271 CD151P48509 253 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms