RNA–Protein interactions for RNA: ENST00000548939.1

CNOT2-216, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-216ENST00000548939 SEMA3CQ99985 751 aa3.48□□□□□ -1.85
CNOT2-216ENST00000548939 FAM120CQ9NX05 1096 aaKnown RBP3.48□□□□□ -1.85
CNOT2-216ENST00000548939 COPG2Q9UBF2 871 aa3.48□□□□□ -1.85
CNOT2-216ENST00000548939 GJD2Q9UKL4 321 aa3.48□□□□□ -1.85
CNOT2-216ENST00000548939 INTS6Q9UL03 887 aaKnown RBP3.48□□□□□ -1.85
CNOT2-216ENST00000548939 TBX20Q9UMR3 447 aa3.48□□□□□ -1.85
CNOT2-216ENST00000548939 COL1A1P02452 1464 aaPredicted RBP3.47□□□□□ -1.85
CNOT2-216ENST00000548939 SH3TC1Q8TE82 1336 aa3.47□□□□□ -1.85
CNOT2-216ENST00000548939 MYO3BQ8WXR4 1341 aa3.47□□□□□ -1.85
CNOT2-216ENST00000548939 TPRP12270 2363 aaKnown RBP3.47□□□□□ -1.85
CNOT2-216ENST00000548939 NUP98P52948 1817 aa3.47□□□□□ -1.85
CNOT2-216ENST00000548939 PI4K2BG5E9Z4 385 aa3.47□□□□□ -1.85
CNOT2-216ENST00000548939 NKX2-2O95096 273 aa3.47□□□□□ -1.85
CNOT2-216ENST00000548939 BMP10O95393 424 aa3.47□□□□□ -1.85
CNOT2-216ENST00000548939 HNRNPA1P09651 372 aaKnown RBP eCLIP3.47□□□□□ -1.85
CNOT2-216ENST00000548939 ACADSP16219 412 aa3.47□□□□□ -1.85
CNOT2-216ENST00000548939 GATA2P23769 480 aaPredicted RBP3.47□□□□□ -1.85
CNOT2-216ENST00000548939 EPHA2P29317 976 aa3.47□□□□□ -1.85
CNOT2-216ENST00000548939 PAFAH1B1P43034 410 aa3.47□□□□□ -1.85
CNOT2-216ENST00000548939 RPS8P62241 208 aaKnown RBP3.47□□□□□ -1.85
CNOT2-216ENST00000548939 CDONQ4KMG0 1287 aa3.47□□□□□ -1.85
CNOT2-216ENST00000548939 TCTEX1D4Q5JR98 221 aa3.47□□□□□ -1.85
CNOT2-216ENST00000548939 NSUN5P2Q63ZY6 315 aa3.47□□□□□ -1.85
CNOT2-216ENST00000548939 DOK6Q6PKX4 331 aa3.47□□□□□ -1.85
CNOT2-216ENST00000548939 LDHAL6AQ6ZMR3 332 aa3.47□□□□□ -1.85
CNOT2-216ENST00000548939 EMC1Q8N766 993 aa3.47□□□□□ -1.85
CNOT2-216ENST00000548939 ZKSCAN4Q969J2 545 aaPredicted RBP3.47□□□□□ -1.85
CNOT2-216ENST00000548939 TMEM143Q96AN5 459 aa3.47□□□□□ -1.85
CNOT2-216ENST00000548939 SAAL1Q96ER3 474 aa3.47□□□□□ -1.85
CNOT2-216ENST00000548939 MAELQ96JY0 434 aaKnown RBP3.47□□□□□ -1.85
CNOT2-216ENST00000548939 RTP3Q9BQQ7 232 aa3.47□□□□□ -1.85
CNOT2-216ENST00000548939 ZCCHC17Q9NP64 241 aaKnown RBP3.47□□□□□ -1.85
CNOT2-216ENST00000548939 UBA2Q9UBT2 640 aaPredicted RBP3.47□□□□□ -1.85
CNOT2-216ENST00000548939 GPR52Q9Y2T5 361 aa3.47□□□□□ -1.85
CNOT2-216ENST00000548939 YIPF1Q9Y548 306 aa3.47□□□□□ -1.85
CNOT2-216ENST00000548939 MAU2Q9Y6X3 613 aa3.47□□□□□ -1.85
CNOT2-216ENST00000548939 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.46□□□□□ -1.86
CNOT2-216ENST00000548939 A0A087WW49 117 aa3.46□□□□□ -1.86
CNOT2-216ENST00000548939 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.46□□□□□ -1.86
CNOT2-216ENST00000548939 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.46□□□□□ -1.86
CNOT2-216ENST00000548939 TCP10L2B9ZVM9 353 aa3.46□□□□□ -1.86
CNOT2-216ENST00000548939 JRKO75564 520 aa3.46□□□□□ -1.86
CNOT2-216ENST00000548939 CSPG5O95196 566 aa3.46□□□□□ -1.86
CNOT2-216ENST00000548939 NGFP01138 241 aa3.46□□□□□ -1.86
CNOT2-216ENST00000548939 SHC1P29353 583 aa3.46□□□□□ -1.86
CNOT2-216ENST00000548939 CTSCP53634 463 aa3.46□□□□□ -1.86
CNOT2-216ENST00000548939 AIMP1Q12904 312 aaKnown RBP3.46□□□□□ -1.86
CNOT2-216ENST00000548939 TAF12Q16514 161 aa3.46□□□□□ -1.86
CNOT2-216ENST00000548939 PNLIPRP3Q17RR3 467 aa3.46□□□□□ -1.86
CNOT2-216ENST00000548939 PRICKLE4Q2TBC4 344 aa3.46□□□□□ -1.86
CNOT2-216ENST00000548939 RAB6CQ53S08 254 aa3.46□□□□□ -1.86
CNOT2-216ENST00000548939 ZNF805Q5CZA5 627 aa3.46□□□□□ -1.86
CNOT2-216ENST00000548939 TSSK4Q6SA08 328 aa3.46□□□□□ -1.86
CNOT2-216ENST00000548939 MCM10Q7L590 875 aa3.46□□□□□ -1.86
CNOT2-216ENST00000548939 ANKRD23Q86SG2 305 aa3.46□□□□□ -1.86
CNOT2-216ENST00000548939 ERO1BQ86YB8 467 aa3.46□□□□□ -1.86
CNOT2-216ENST00000548939 PTOV1Q86YD1 416 aa3.46□□□□□ -1.86
CNOT2-216ENST00000548939 ANKRD18AQ8IVF6 992 aa3.46□□□□□ -1.86
CNOT2-216ENST00000548939 OR2T12Q8NG77 320 aa3.46□□□□□ -1.86
CNOT2-216ENST00000548939 HM13Q8TCT9 377 aa3.46□□□□□ -1.86
CNOT2-216ENST00000548939 GIMAP5Q96F15 307 aa3.46□□□□□ -1.86
CNOT2-216ENST00000548939 PKP2Q99959 881 aa3.46□□□□□ -1.86
CNOT2-216ENST00000548939 THUMPD2Q9BTF0 503 aaKnown RBP3.46□□□□□ -1.86
CNOT2-216ENST00000548939 FGFBP2Q9BYJ0 223 aa3.46□□□□□ -1.86
CNOT2-216ENST00000548939 TMEM39BQ9GZU3 492 aa3.46□□□□□ -1.86
CNOT2-216ENST00000548939 RAB6CQ9H0N0 254 aa3.46□□□□□ -1.86
CNOT2-216ENST00000548939 RANBP17Q9H2T7 1088 aaKnown RBP3.46□□□□□ -1.86
CNOT2-216ENST00000548939 MAGIXQ9H6Y5 334 aa3.46□□□□□ -1.86
CNOT2-216ENST00000548939 COQ3Q9NZJ6 369 aa3.46□□□□□ -1.86
CNOT2-216ENST00000548939 ABI3Q9P2A4 366 aa3.46□□□□□ -1.86
CNOT2-216ENST00000548939 MKLN1Q9UL63 735 aa3.46□□□□□ -1.86
CNOT2-216ENST00000548939 CAMK2AQ9UQM7 478 aa3.46□□□□□ -1.86
CNOT2-216ENST00000548939 CLIC4Q9Y696 253 aa3.46□□□□□ -1.86
CNOT2-216ENST00000548939 LAMB2P55268 1798 aa3.46□□□□□ -1.86
CNOT2-216ENST00000548939 OTOFQ9HC10 1997 aa3.45□□□□□ -1.86
CNOT2-216ENST00000548939 UNC79Q9P2D8 2635 aa3.45□□□□□ -1.86
CNOT2-216ENST00000548939 IGHV4-4A0A075B6R2 117 aa3.45□□□□□ -1.86
CNOT2-216ENST00000548939 EIF3CLB5ME19 914 aaKnown RBP3.45□□□□□ -1.86
CNOT2-216ENST00000548939 PLK4O00444 970 aa3.45□□□□□ -1.86
CNOT2-216ENST00000548939 TNFSF14O43557 240 aa3.45□□□□□ -1.86
CNOT2-216ENST00000548939 GPR137BO60478 399 aa3.45□□□□□ -1.86
CNOT2-216ENST00000548939 MOCS3O95396 460 aa3.45□□□□□ -1.86
CNOT2-216ENST00000548939 CEBPBP17676 345 aa3.45□□□□□ -1.86
CNOT2-216ENST00000548939 CYP2B6P20813 491 aa3.45□□□□□ -1.86
CNOT2-216ENST00000548939 NFKBIAP25963 317 aa3.45□□□□□ -1.86
CNOT2-216ENST00000548939 TLX1P31314 330 aaPredicted RBP3.45□□□□□ -1.86
CNOT2-216ENST00000548939 CEACAM8P31997 349 aaPredicted RBP3.45□□□□□ -1.86
CNOT2-216ENST00000548939 PRCPP42785 496 aa3.45□□□□□ -1.86
CNOT2-216ENST00000548939 MMP15P51511 669 aa3.45□□□□□ -1.86
CNOT2-216ENST00000548939 EIF3BP55884 814 aaKnown RBP3.45□□□□□ -1.86
CNOT2-216ENST00000548939 SNX16P57768 344 aa3.45□□□□□ -1.86
CNOT2-216ENST00000548939 RHBDL3P58872 404 aa3.45□□□□□ -1.86
CNOT2-216ENST00000548939 TLE2Q04725 743 aa3.45□□□□□ -1.86
CNOT2-216ENST00000548939 PTP4A2Q12974 167 aa3.45□□□□□ -1.86
CNOT2-216ENST00000548939 PPIL2Q13356 520 aa3.45□□□□□ -1.86
CNOT2-216ENST00000548939 BAK1Q16611 211 aa3.45□□□□□ -1.86
CNOT2-216ENST00000548939 FAM69AQ5T7M9 428 aa3.45□□□□□ -1.86
CNOT2-216ENST00000548939 ZNF774Q6NX45 483 aa3.45□□□□□ -1.86
CNOT2-216ENST00000548939 FASTKD5Q7L8L6 764 aaKnown RBP3.45□□□□□ -1.86
CNOT2-216ENST00000548939 C1orf52Q8N6N3 182 aaKnown RBP3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms