RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 SLCO1B7G3V0H7 640 aa19.53■□□□□ 0.72
CTDSP2-204ENST00000548823 CCDC22O60826 627 aa19.53■□□□□ 0.72
CTDSP2-204ENST00000548823 SRP72O76094 671 aaKnown RBP19.53■□□□□ 0.72
CTDSP2-204ENST00000548823 UNC5CO95185 931 aa19.53■□□□□ 0.72
CTDSP2-204ENST00000548823 PCDH8O95206 1070 aa19.53■□□□□ 0.72
CTDSP2-204ENST00000548823 HSPA4LO95757 839 aa19.53■□□□□ 0.72
CTDSP2-204ENST00000548823 JUNDP17535 347 aa19.53■□□□□ 0.72
CTDSP2-204ENST00000548823 RPS3P23396 243 aaKnown RBP eCLIP19.53■□□□□ 0.723e-8■■□□□ 13.6
CTDSP2-204ENST00000548823 ARRB2P32121 409 aa19.53■□□□□ 0.72
CTDSP2-204ENST00000548823 RECQLP46063 649 aaPredicted RBP19.53■□□□□ 0.72
CTDSP2-204ENST00000548823 PGGT1BP53609 377 aa19.53■□□□□ 0.72
CTDSP2-204ENST00000548823 AQP5P55064 265 aa19.53■□□□□ 0.72
CTDSP2-204ENST00000548823 PDAP1Q13442 181 aaKnown RBP19.53■□□□□ 0.72
CTDSP2-204ENST00000548823 GPR33Q49SQ1 333 aa19.53■□□□□ 0.72
CTDSP2-204ENST00000548823 ZRANB3Q5FWF4 1079 aa19.53■□□□□ 0.72
CTDSP2-204ENST00000548823 DPY19L3Q6ZPD9 716 aa19.53■□□□□ 0.72
CTDSP2-204ENST00000548823 Q6ZVU0 165 aa19.53■□□□□ 0.72
CTDSP2-204ENST00000548823 USP45Q70EL2 814 aa19.53■□□□□ 0.72
CTDSP2-204ENST00000548823 B3GNT8Q7Z7M8 397 aa19.53■□□□□ 0.72
CTDSP2-204ENST00000548823 ISCA2Q86U28 154 aa19.53■□□□□ 0.72
CTDSP2-204ENST00000548823 MTDHQ86UE4 582 aaKnown RBP19.53■□□□□ 0.72
CTDSP2-204ENST00000548823 VASH2Q86V25 355 aa19.53■□□□□ 0.72
CTDSP2-204ENST00000548823 SLC35F3Q8IY50 421 aa19.53■□□□□ 0.72
CTDSP2-204ENST00000548823 PIANPQ8IYJ0 282 aa19.53■□□□□ 0.72
CTDSP2-204ENST00000548823 KIRREL3Q8IZU9 778 aa19.53■□□□□ 0.72
CTDSP2-204ENST00000548823 NKAPQ8N5F7 415 aaKnown RBP19.53■□□□□ 0.72
CTDSP2-204ENST00000548823 ANKRD49Q8WVL7 239 aa19.53■□□□□ 0.72
CTDSP2-204ENST00000548823 CNDP1Q96KN2 507 aa19.53■□□□□ 0.72
CTDSP2-204ENST00000548823 BIRC8Q96P09 236 aa19.53■□□□□ 0.72
CTDSP2-204ENST00000548823 DERL2Q9GZP9 239 aa19.53■□□□□ 0.72
CTDSP2-204ENST00000548823 ILKAPQ9H0C8 392 aaPredicted RBP19.53■□□□□ 0.72
CTDSP2-204ENST00000548823 TFB2MQ9H5Q4 396 aaKnown RBP19.53■□□□□ 0.72
CTDSP2-204ENST00000548823 ANAPC2Q9UJX6 822 aa19.53■□□□□ 0.72
CTDSP2-204ENST00000548823 C1orf232A0A0U1RR37 186 aa19.52■□□□□ 0.72
CTDSP2-204ENST00000548823 UBA6A0AVT1 1052 aaPredicted RBP19.52■□□□□ 0.72
CTDSP2-204ENST00000548823 VPS26AO75436 327 aa19.52■□□□□ 0.72
CTDSP2-204ENST00000548823 CD1DP15813 335 aa19.52■□□□□ 0.72
CTDSP2-204ENST00000548823 NFKBIAP25963 317 aa19.52■□□□□ 0.72
CTDSP2-204ENST00000548823 GKP32189 559 aa19.52■□□□□ 0.72
CTDSP2-204ENST00000548823 RABIFP47224 123 aa19.52■□□□□ 0.72
CTDSP2-204ENST00000548823 ATP6V0D1P61421 351 aa19.52■□□□□ 0.72
CTDSP2-204ENST00000548823 GALNT1Q10472 559 aaPredicted RBP19.52■□□□□ 0.72
CTDSP2-204ENST00000548823 PRKAA1Q13131 559 aa19.52■□□□□ 0.72
CTDSP2-204ENST00000548823 KRT72Q14CN4 511 aa19.52■□□□□ 0.72
CTDSP2-204ENST00000548823 TMEM259Q4ZIN3 620 aa19.52■□□□□ 0.72
CTDSP2-204ENST00000548823 SEL1L3Q68CR1 1132 aa19.52■□□□□ 0.72
CTDSP2-204ENST00000548823 BRAT1Q6PJG6 821 aa19.52■□□□□ 0.72
CTDSP2-204ENST00000548823 SNX20Q7Z614 316 aa19.52■□□□□ 0.72
CTDSP2-204ENST00000548823 ZSWIM9Q86XI8 627 aa19.52■□□□□ 0.72
CTDSP2-204ENST00000548823 OR2A12Q8NGT7 310 aa19.52■□□□□ 0.72
CTDSP2-204ENST00000548823 BTN2A2Q8WVV5 523 aa19.52■□□□□ 0.72
CTDSP2-204ENST00000548823 KCNJ9Q92806 393 aa19.52■□□□□ 0.72
CTDSP2-204ENST00000548823 HEPHQ9BQS7 1158 aa19.52■□□□□ 0.72
CTDSP2-204ENST00000548823 CDH19Q9H159 772 aa19.52■□□□□ 0.72
CTDSP2-204ENST00000548823 P2RY12Q9H244 342 aa19.52■□□□□ 0.72
CTDSP2-204ENST00000548823 BPIFA1Q9NP55 256 aa19.52■□□□□ 0.72
CTDSP2-204ENST00000548823 PADI4Q9UM07 663 aa19.52■□□□□ 0.72
CTDSP2-204ENST00000548823 MED16Q9Y2X0 877 aa19.52■□□□□ 0.72
CTDSP2-204ENST00000548823 PCDHB11Q9Y5F2 797 aa19.52■□□□□ 0.72
CTDSP2-204ENST00000548823 CAPN7Q9Y6W3 813 aa19.52■□□□□ 0.72
CTDSP2-204ENST00000548823 ZFC3H1O60293 1989 aaKnown RBP19.52■□□□□ 0.71
CTDSP2-204ENST00000548823 AGAP14A8MT82 685 aa19.51■□□□□ 0.71
CTDSP2-204ENST00000548823 GAPDHSO14556 408 aaPredicted RBP19.51■□□□□ 0.71
CTDSP2-204ENST00000548823 ZNF195O14628 629 aa19.51■□□□□ 0.71
CTDSP2-204ENST00000548823 IPO13O94829 963 aaKnown RBP19.51■□□□□ 0.71
CTDSP2-204ENST00000548823 JMJD7P0C870 316 aa19.51■□□□□ 0.71
CTDSP2-204ENST00000548823 PRSS56P0CW18 603 aa19.51■□□□□ 0.71
CTDSP2-204ENST00000548823 HGFP14210 728 aa19.51■□□□□ 0.71
CTDSP2-204ENST00000548823 TFEBP19484 476 aa19.51■□□□□ 0.71
CTDSP2-204ENST00000548823 WT1P19544 449 aaPredicted RBP19.51■□□□□ 0.71
CTDSP2-204ENST00000548823 ITGALP20701 1170 aa19.51■□□□□ 0.71
CTDSP2-204ENST00000548823 SERPINB3P29508 390 aa19.51■□□□□ 0.71
CTDSP2-204ENST00000548823 FMO4P31512 558 aa19.51■□□□□ 0.71
CTDSP2-204ENST00000548823 SPAM1P38567 509 aa19.51■□□□□ 0.71
CTDSP2-204ENST00000548823 TBCCQ15814 346 aa19.51■□□□□ 0.71
CTDSP2-204ENST00000548823 UGT3A1Q6NUS8 523 aa19.51■□□□□ 0.71
CTDSP2-204ENST00000548823 GDPD4Q6W3E5 623 aa19.51■□□□□ 0.71
CTDSP2-204ENST00000548823 ASRGL1Q7L266 308 aa19.51■□□□□ 0.71
CTDSP2-204ENST00000548823 PAF1Q8N7H5 531 aa19.51■□□□□ 0.71
CTDSP2-204ENST00000548823 INPP5DQ92835 1189 aa19.51■□□□□ 0.71
CTDSP2-204ENST00000548823 OSBPL1AQ9BXW6 950 aa19.51■□□□□ 0.71
CTDSP2-204ENST00000548823 SLC17A9Q9BYT1 436 aa19.51■□□□□ 0.71
CTDSP2-204ENST00000548823 SPASTQ9UBP0 616 aa19.51■□□□□ 0.71
CTDSP2-204ENST00000548823 PISDQ9UG56 409 aa19.51■□□□□ 0.71
CTDSP2-204ENST00000548823 TUBD1Q9UJT1 453 aa19.51■□□□□ 0.71
CTDSP2-204ENST00000548823 KPNA3O00505 521 aaPredicted RBP19.5■□□□□ 0.71
CTDSP2-204ENST00000548823 PRMT5O14744 637 aaPredicted RBP19.5■□□□□ 0.71
CTDSP2-204ENST00000548823 BNIP3LO60238 219 aa19.5■□□□□ 0.71
CTDSP2-204ENST00000548823 CLDN7O95471 211 aa19.5■□□□□ 0.71
CTDSP2-204ENST00000548823 SLC4A1P02730 911 aa19.5■□□□□ 0.71
CTDSP2-204ENST00000548823 CTSLP07711 333 aa19.5■□□□□ 0.71
CTDSP2-204ENST00000548823 SERPINA6P08185 405 aa19.5■□□□□ 0.71
CTDSP2-204ENST00000548823 ZNF7P17097 686 aaPredicted RBP19.5■□□□□ 0.71
CTDSP2-204ENST00000548823 CCR10P46092 362 aa19.5■□□□□ 0.71
CTDSP2-204ENST00000548823 CDKN1CP49918 316 aaPredicted RBP19.5■□□□□ 0.71
CTDSP2-204ENST00000548823 RASSF2P50749 326 aa19.5■□□□□ 0.71
CTDSP2-204ENST00000548823 NAGLUP54802 743 aa19.5■□□□□ 0.71
CTDSP2-204ENST00000548823 NAA20P61599 178 aa19.5■□□□□ 0.71
CTDSP2-204ENST00000548823 PTPRRQ15256 657 aa19.5■□□□□ 0.71
CTDSP2-204ENST00000548823 BORAQ6PGQ7 559 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms