RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 KALRNO60229 2985 aa15.26■□□□□ 0.03
DDX54-205ENST00000548786 TMEM150CB9EJG8 249 aa15.26■□□□□ 0.03
DDX54-205ENST00000548786 H3BMM5 538 aa15.26■□□□□ 0.03
DDX54-205ENST00000548786 KPNA5O15131 536 aa15.26■□□□□ 0.03
DDX54-205ENST00000548786 HAUS5O94927 633 aa15.26■□□□□ 0.03
DDX54-205ENST00000548786 SEC31AO94979 1220 aaKnown RBP15.26■□□□□ 0.03
DDX54-205ENST00000548786 PRB1P04280 392 aa15.26■□□□□ 0.03
DDX54-205ENST00000548786 RPN2P04844 631 aa15.26■□□□□ 0.03
DDX54-205ENST00000548786 PRKAR1AP10644 381 aa15.26■□□□□ 0.03
DDX54-205ENST00000548786 MAP4P27816 1152 aaKnown RBP15.26■□□□□ 0.03
DDX54-205ENST00000548786 PEBP1P30086 187 aaKnown RBP15.26■□□□□ 0.03
DDX54-205ENST00000548786 RPL21P46778 160 aaKnown RBP15.26■□□□□ 0.03
DDX54-205ENST00000548786 TUBB4BP68371 445 aa15.26■□□□□ 0.03
DDX54-205ENST00000548786 ACY1Q03154 408 aa15.26■□□□□ 0.03
DDX54-205ENST00000548786 TUBB2AQ13885 445 aa15.26■□□□□ 0.03
DDX54-205ENST00000548786 HIF1AQ16665 826 aa15.26■□□□□ 0.03
DDX54-205ENST00000548786 TAF1BQ53T94 588 aaPredicted RBP15.26■□□□□ 0.03
DDX54-205ENST00000548786 HIBCHQ6NVY1 386 aaPredicted RBP15.26■□□□□ 0.03
DDX54-205ENST00000548786 TMEM126BQ8IUX1 230 aa15.26■□□□□ 0.03
DDX54-205ENST00000548786 PDIK1LQ8N165 341 aa15.26■□□□□ 0.03
DDX54-205ENST00000548786 ESX1Q8N693 406 aa15.26■□□□□ 0.03
DDX54-205ENST00000548786 LINC01555Q8NAE3 123 aa15.26■□□□□ 0.03
DDX54-205ENST00000548786 ZSCAN1Q8NBB4 408 aa15.26■□□□□ 0.03
DDX54-205ENST00000548786 SPATA4Q8NEY3 305 aa15.26■□□□□ 0.03
DDX54-205ENST00000548786 GIMAP7Q8NHV1 300 aa15.26■□□□□ 0.03
DDX54-205ENST00000548786 KIAA1143Q96AT1 154 aaPredicted RBP15.26■□□□□ 0.03
DDX54-205ENST00000548786 TRAPPC9Q96Q05 1148 aa15.26■□□□□ 0.03
DDX54-205ENST00000548786 OR2A14Q96R47 310 aa15.26■□□□□ 0.03
DDX54-205ENST00000548786 UBL7Q96S82 380 aaPredicted RBP15.26■□□□□ 0.03
DDX54-205ENST00000548786 NDNQ99608 321 aa15.26■□□□□ 0.03
DDX54-205ENST00000548786 WDR83Q9BRX9 315 aaKnown RBP15.26■□□□□ 0.03
DDX54-205ENST00000548786 TUBB2BQ9BVA1 445 aa15.26■□□□□ 0.03
DDX54-205ENST00000548786 PITPNM3Q9BZ71 974 aa15.26■□□□□ 0.03
DDX54-205ENST00000548786 RNF14Q9UBS8 474 aa15.26■□□□□ 0.03
DDX54-205ENST00000548786 IL17BQ9UHF5 180 aa15.26■□□□□ 0.03
DDX54-205ENST00000548786 FBXO5Q9UKT4 447 aa15.26■□□□□ 0.03
DDX54-205ENST00000548786 SLC39A10Q9ULF5 831 aa15.26■□□□□ 0.03
DDX54-205ENST00000548786 BTRCQ9Y297 605 aa15.26■□□□□ 0.03
DDX54-205ENST00000548786 VPS9D1Q9Y2B5 631 aa15.26■□□□□ 0.03
DDX54-205ENST00000548786 MRPS18BQ9Y676 258 aaKnown RBP15.26■□□□□ 0.03
DDX54-205ENST00000548786 PIEZO2Q9H5I5 2752 aa15.26■□□□□ 0.03
DDX54-205ENST00000548786 SMG1Q96Q15 3661 aaKnown RBP15.25■□□□□ 0.03
DDX54-205ENST00000548786 KDM1AO60341 852 aa15.25■□□□□ 0.03
DDX54-205ENST00000548786 C1orf105O95561 183 aa15.25■□□□□ 0.03
DDX54-205ENST00000548786 STAT5AP42229 794 aa15.25■□□□□ 0.03
DDX54-205ENST00000548786 CARSP49589 748 aaKnown RBP15.25■□□□□ 0.03
DDX54-205ENST00000548786 RAB28P51157 221 aa15.25■□□□□ 0.03
DDX54-205ENST00000548786 ADARP55265 1226 aaKnown RBP15.25■□□□□ 0.03
DDX54-205ENST00000548786 GRB7Q14451 532 aa15.25■□□□□ 0.03
DDX54-205ENST00000548786 KYNUQ16719 465 aa15.25■□□□□ 0.03
DDX54-205ENST00000548786 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.25■□□□□ 0.03
DDX54-205ENST00000548786 SPANXN3Q5MJ09 141 aa15.25■□□□□ 0.03
DDX54-205ENST00000548786 CDHR3Q6ZTQ4 885 aa15.25■□□□□ 0.03
DDX54-205ENST00000548786 C19orf47Q8N9M1 422 aaKnown RBP15.25■□□□□ 0.03
DDX54-205ENST00000548786 CALML6Q8TD86 181 aa15.25■□□□□ 0.03
DDX54-205ENST00000548786 ZNF501Q96CX3 271 aaPredicted RBP15.25■□□□□ 0.03
DDX54-205ENST00000548786 FOPNLQ96NB1 174 aa15.25■□□□□ 0.03
DDX54-205ENST00000548786 FANCEQ9HB96 536 aa15.25■□□□□ 0.03
DDX54-205ENST00000548786 OR6C2Q9NZP2 312 aa15.25■□□□□ 0.03
DDX54-205ENST00000548786 ZC3H7BQ9UGR2 993 aaKnown RBP15.25■□□□□ 0.03
DDX54-205ENST00000548786 CROTQ9UKG9 612 aa15.25■□□□□ 0.03
DDX54-205ENST00000548786 ATRXP46100 2492 aa15.25■□□□□ 0.03
DDX54-205ENST00000548786 A0A0J9YY10 115 aa15.24■□□□□ 0.03
DDX54-205ENST00000548786 EIF4E1BA6NMX2 242 aaKnown RBP15.24■□□□□ 0.03
DDX54-205ENST00000548786 MAP3K7O43318 606 aa15.24■□□□□ 0.03
DDX54-205ENST00000548786 RAD51CO43502 376 aa15.24■□□□□ 0.03
DDX54-205ENST00000548786 KATNA1O75449 491 aa15.24■□□□□ 0.03
DDX54-205ENST00000548786 SCRG1O75711 98 aa15.24■□□□□ 0.03
DDX54-205ENST00000548786 TTC4O95801 387 aa15.24■□□□□ 0.03
DDX54-205ENST00000548786 F8A1P23610 371 aa15.24■□□□□ 0.03
DDX54-205ENST00000548786 DLSTP36957 453 aa15.24■□□□□ 0.03
DDX54-205ENST00000548786 CLCN7P51798 805 aa15.24■□□□□ 0.03
DDX54-205ENST00000548786 ARL4CP56559 192 aa15.24■□□□□ 0.03
DDX54-205ENST00000548786 PDIA2Q13087 525 aaKnown RBP15.24■□□□□ 0.03
DDX54-205ENST00000548786 LY6DQ14210 128 aa15.24■□□□□ 0.03
DDX54-205ENST00000548786 FASTKD3Q14CZ7 662 aaKnown RBP15.24■□□□□ 0.03
DDX54-205ENST00000548786 ZIC1Q15915 447 aa15.24■□□□□ 0.03
DDX54-205ENST00000548786 KLHL38Q2WGJ6 581 aa15.24■□□□□ 0.03
DDX54-205ENST00000548786 ATP1A1-AS1Q5TC04 95 aa15.24■□□□□ 0.03
DDX54-205ENST00000548786 CYB5D1Q6P9G0 228 aa15.24■□□□□ 0.03
DDX54-205ENST00000548786 FAM199XQ6PEV8 388 aaPredicted RBP15.24■□□□□ 0.03
DDX54-205ENST00000548786 TTC23LQ6PF05 361 aa15.24■□□□□ 0.03
DDX54-205ENST00000548786 TRMT10BQ6PF06 316 aaKnown RBP15.24■□□□□ 0.03
DDX54-205ENST00000548786 PCSK4Q6UW60 755 aa15.24■□□□□ 0.03
DDX54-205ENST00000548786 CAPN12Q6ZSI9 719 aa15.24■□□□□ 0.03
DDX54-205ENST00000548786 OR1L3Q8NH93 324 aa15.24■□□□□ 0.03
DDX54-205ENST00000548786 FLVCR1-AS1Q8TAF5 88 aa15.24■□□□□ 0.03
DDX54-205ENST00000548786 N4BP2L2Q92802 583 aaPredicted RBP15.24■□□□□ 0.03
DDX54-205ENST00000548786 EXTL1Q92935 676 aa15.24■□□□□ 0.03
DDX54-205ENST00000548786 CERS2Q96G23 380 aa15.24■□□□□ 0.03
DDX54-205ENST00000548786 GPR21Q99679 349 aa15.24■□□□□ 0.03
DDX54-205ENST00000548786 MENTQ9BUN1 341 aa15.24■□□□□ 0.03
DDX54-205ENST00000548786 AKIRIN1Q9H9L7 192 aaPredicted RBP15.24■□□□□ 0.03
DDX54-205ENST00000548786 PLAC1Q9HBJ0 212 aa15.24■□□□□ 0.03
DDX54-205ENST00000548786 FAM60AQ9NP50 221 aa15.24■□□□□ 0.03
DDX54-205ENST00000548786 MED16Q9Y2X0 877 aa15.24■□□□□ 0.03
DDX54-205ENST00000548786 RASGRF2O14827 1237 aa15.23■□□□□ 0.03
DDX54-205ENST00000548786 TP73O15350 636 aa15.23■□□□□ 0.03
DDX54-205ENST00000548786 NKX2-8O15522 239 aa15.23■□□□□ 0.03
DDX54-205ENST00000548786 HCRTR1O43613 425 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms