RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 AIM2O14862 343 aa13.09□□□□□ -0.31
PTCH1-215ENST00000547672 PEX11AO75192 247 aa13.09□□□□□ -0.31
PTCH1-215ENST00000547672 ATP6AP2O75787 350 aa13.09□□□□□ -0.31
PTCH1-215ENST00000547672 SLC35G4P0C7Q5 338 aa13.09□□□□□ -0.31
PTCH1-215ENST00000547672 HSD3B1P14060 373 aa13.09□□□□□ -0.31
PTCH1-215ENST00000547672 HSD3B2P26439 372 aa13.09□□□□□ -0.31
PTCH1-215ENST00000547672 HTR1BP28222 390 aa13.09□□□□□ -0.31
PTCH1-215ENST00000547672 CPOXP36551 454 aa13.09□□□□□ -0.31
PTCH1-215ENST00000547672 CASP2P42575 452 aa13.09□□□□□ -0.31
PTCH1-215ENST00000547672 GNPDA1P46926 289 aa13.09□□□□□ -0.31
PTCH1-215ENST00000547672 CPA2P48052 419 aa13.09□□□□□ -0.31
PTCH1-215ENST00000547672 FOXA1P55317 472 aa13.09□□□□□ -0.31
PTCH1-215ENST00000547672 KCNK10P57789 538 aa13.09□□□□□ -0.31
PTCH1-215ENST00000547672 YPEL5P62699 121 aa13.09□□□□□ -0.31
PTCH1-215ENST00000547672 IRF8Q02556 426 aa13.09□□□□□ -0.31
PTCH1-215ENST00000547672 CCINQ13939 588 aa13.09□□□□□ -0.31
PTCH1-215ENST00000547672 PTK2BQ14289 1009 aa13.09□□□□□ -0.31
PTCH1-215ENST00000547672 IRF4Q15306 451 aa13.09□□□□□ -0.31
PTCH1-215ENST00000547672 MLF2Q15773 248 aaPredicted RBP13.09□□□□□ -0.31
PTCH1-215ENST00000547672 HIST2H2ACQ16777 129 aaPredicted RBP13.09□□□□□ -0.31
PTCH1-215ENST00000547672 LRRK1Q38SD2 2015 aa13.09□□□□□ -0.31
PTCH1-215ENST00000547672 PAGE2BQ5JRK9 111 aa13.09□□□□□ -0.31
PTCH1-215ENST00000547672 C6orf136Q5SQH8 315 aa13.09□□□□□ -0.31
PTCH1-215ENST00000547672 TMEM198Q66K66 360 aa13.09□□□□□ -0.31
PTCH1-215ENST00000547672 HIST2H2AA3Q6FI13 130 aa13.09□□□□□ -0.31
PTCH1-215ENST00000547672 KIAA1324Q6UXG2 1013 aaKnown RBP13.09□□□□□ -0.31
PTCH1-215ENST00000547672 THOC6Q86W42 341 aaKnown RBP13.09□□□□□ -0.31
PTCH1-215ENST00000547672 PGAM4Q8N0Y7 254 aa13.09□□□□□ -0.31
PTCH1-215ENST00000547672 POU5F2Q8N7G0 328 aa13.09□□□□□ -0.31
PTCH1-215ENST00000547672 PLA2G15Q8NCC3 412 aa13.09□□□□□ -0.31
PTCH1-215ENST00000547672 FAM13CQ8NE31 585 aa13.09□□□□□ -0.31
PTCH1-215ENST00000547672 OR56A3Q8NH54 315 aa13.09□□□□□ -0.31
PTCH1-215ENST00000547672 RPLP0P6Q8NHW5 317 aa13.09□□□□□ -0.31
PTCH1-215ENST00000547672 FOXJ1Q92949 421 aa13.09□□□□□ -0.31
PTCH1-215ENST00000547672 UBE2E3Q969T4 207 aa13.09□□□□□ -0.31
PTCH1-215ENST00000547672 MRGPRX1Q96LB2 322 aa13.09□□□□□ -0.31
PTCH1-215ENST00000547672 C3orf30Q96M34 536 aa13.09□□□□□ -0.31
PTCH1-215ENST00000547672 KCNA7Q96RP8 456 aa13.09□□□□□ -0.31
PTCH1-215ENST00000547672 HOPXQ9BPY8 73 aaPredicted RBP13.09□□□□□ -0.31
PTCH1-215ENST00000547672 HAUS8Q9BT25 410 aa13.09□□□□□ -0.31
PTCH1-215ENST00000547672 APOOQ9BUR5 198 aa13.09□□□□□ -0.31
PTCH1-215ENST00000547672 TUBB1Q9H4B7 451 aa13.09□□□□□ -0.31
PTCH1-215ENST00000547672 AIG1Q9NVV5 245 aa13.09□□□□□ -0.31
PTCH1-215ENST00000547672 STOX2Q9P2F5 926 aaPredicted RBP13.09□□□□□ -0.31
PTCH1-215ENST00000547672 BAIAP2L1Q9UHR4 511 aa13.09□□□□□ -0.31
PTCH1-215ENST00000547672 MBD1Q9UIS9 605 aaPredicted RBP13.09□□□□□ -0.31
PTCH1-215ENST00000547672 ZNF225Q9UK10 706 aa13.09□□□□□ -0.31
PTCH1-215ENST00000547672 ZNF490Q9ULM2 529 aaPredicted RBP13.09□□□□□ -0.31
PTCH1-215ENST00000547672 ZFR2Q9UPR6 939 aaKnown RBP13.09□□□□□ -0.31
PTCH1-215ENST00000547672 BTRCQ9Y297 605 aa13.09□□□□□ -0.31
PTCH1-215ENST00000547672 TMEM98Q9Y2Y6 226 aa13.09□□□□□ -0.31
PTCH1-215ENST00000547672 TMED5Q9Y3A6 229 aa13.09□□□□□ -0.31
PTCH1-215ENST00000547672 DYRK1BQ9Y463 629 aa13.09□□□□□ -0.31
PTCH1-215ENST00000547672 PCDHGA11Q9Y5H2 935 aa13.09□□□□□ -0.31
PTCH1-215ENST00000547672 ST14Q9Y5Y6 855 aa13.09□□□□□ -0.31
PTCH1-215ENST00000547672 HEBP2Q9Y5Z4 205 aa13.09□□□□□ -0.31
PTCH1-215ENST00000547672 LAMA2P24043 3122 aaKnown RBP13.09□□□□□ -0.31
PTCH1-215ENST00000547672 TRPM6Q9BX84 2022 aa13.08□□□□□ -0.31
PTCH1-215ENST00000547672 CHURC1-FNTBB4DL54 471 aa13.08□□□□□ -0.32
PTCH1-215ENST00000547672 TNFRSF10CO14798 259 aa13.08□□□□□ -0.32
PTCH1-215ENST00000547672 ANGPT2O15123 496 aa13.08□□□□□ -0.32
PTCH1-215ENST00000547672 NRP2O60462 931 aa13.08□□□□□ -0.32
PTCH1-215ENST00000547672 SLC22A3O75751 556 aa13.08□□□□□ -0.32
PTCH1-215ENST00000547672 ATP6V1G2O95670 118 aa13.08□□□□□ -0.32
PTCH1-215ENST00000547672 APBB3O95704 486 aa13.08□□□□□ -0.32
PTCH1-215ENST00000547672 JUPP14923 745 aa13.08□□□□□ -0.32
PTCH1-215ENST00000547672 ACPPP15309 386 aa13.08□□□□□ -0.32
PTCH1-215ENST00000547672 IDSP22304 550 aa13.08□□□□□ -0.32
PTCH1-215ENST00000547672 GPX3P22352 226 aa13.08□□□□□ -0.32
PTCH1-215ENST00000547672 ACADLP28330 430 aa13.08□□□□□ -0.32
PTCH1-215ENST00000547672 AKT2P31751 481 aa13.08□□□□□ -0.32
PTCH1-215ENST00000547672 HALP42357 657 aa13.08□□□□□ -0.32
PTCH1-215ENST00000547672 GDF5P43026 501 aa13.08□□□□□ -0.32
PTCH1-215ENST00000547672 PREPP48147 710 aa13.08□□□□□ -0.32
PTCH1-215ENST00000547672 NUDT2P50583 147 aa13.08□□□□□ -0.32
PTCH1-215ENST00000547672 KIAA1024LP59773 190 aa13.08□□□□□ -0.32
PTCH1-215ENST00000547672 NAE1Q13564 534 aa13.08□□□□□ -0.32
PTCH1-215ENST00000547672 NR6A1Q15406 480 aa13.08□□□□□ -0.32
PTCH1-215ENST00000547672 FBXO48Q5FWF7 155 aa13.08□□□□□ -0.32
PTCH1-215ENST00000547672 CRTC3Q6UUV7 619 aa13.08□□□□□ -0.32
PTCH1-215ENST00000547672 PRR23BQ6ZRT6 265 aa13.08□□□□□ -0.32
PTCH1-215ENST00000547672 TRIM74Q86UV6 250 aa13.08□□□□□ -0.32
PTCH1-215ENST00000547672 MYLK4Q86YV6 388 aaPredicted RBP13.08□□□□□ -0.32
PTCH1-215ENST00000547672 ZNF547Q8IVP9 402 aa13.08□□□□□ -0.32
PTCH1-215ENST00000547672 SPNS2Q8IVW8 549 aa13.08□□□□□ -0.32
PTCH1-215ENST00000547672 DCUN1D3Q8IWE4 304 aa13.08□□□□□ -0.32
PTCH1-215ENST00000547672 FNDC5Q8NAU1 212 aa13.08□□□□□ -0.32
PTCH1-215ENST00000547672 GLB1L3Q8NCI6 653 aaPredicted RBP13.08□□□□□ -0.32
PTCH1-215ENST00000547672 NAT14Q8WUY8 206 aa13.08□□□□□ -0.32
PTCH1-215ENST00000547672 TFGQ92734 400 aaPredicted RBP13.08□□□□□ -0.32
PTCH1-215ENST00000547672 USP7Q93009 1102 aa13.08□□□□□ -0.32
PTCH1-215ENST00000547672 PKP4Q99569 1192 aa13.08□□□□□ -0.32
PTCH1-215ENST00000547672 RAB11FIP5Q9BXF6 653 aa13.08□□□□□ -0.32
PTCH1-215ENST00000547672 BRINP2Q9C0B6 783 aa13.08□□□□□ -0.32
PTCH1-215ENST00000547672 TRIT1Q9H3H1 467 aaKnown RBP13.08□□□□□ -0.32
PTCH1-215ENST00000547672 EHD1Q9H4M9 534 aa13.08□□□□□ -0.32
PTCH1-215ENST00000547672 DCLRE1BQ9H816 532 aa13.08□□□□□ -0.32
PTCH1-215ENST00000547672 ASIC5Q9NY37 505 aa13.08□□□□□ -0.32
PTCH1-215ENST00000547672 CCDC167Q9P0B6 97 aa13.08□□□□□ -0.32
PTCH1-215ENST00000547672 SPATA7Q9P0W8 599 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms