RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 PMS2P54278 862 aa6.2□□□□□ -1.42
PRKDC-211ENST00000546304 DMPKQ09013 629 aa6.2□□□□□ -1.42
PRKDC-211ENST00000546304 SLC14A1Q13336 389 aa6.2□□□□□ -1.42
PRKDC-211ENST00000546304 C1orf61Q13536 156 aa6.2□□□□□ -1.42
PRKDC-211ENST00000546304 BOP1Q14137 746 aaKnown RBP6.2□□□□□ -1.42
PRKDC-211ENST00000546304 NFE2L1Q14494 772 aa6.2□□□□□ -1.42
PRKDC-211ENST00000546304 TMED2Q15363 201 aa6.2□□□□□ -1.42
PRKDC-211ENST00000546304 SEPT7Q16181 437 aaKnown RBP6.2□□□□□ -1.42
PRKDC-211ENST00000546304 KYNUQ16719 465 aa6.2□□□□□ -1.42
PRKDC-211ENST00000546304 DEFB133Q30KQ1 61 aa6.2□□□□□ -1.42
PRKDC-211ENST00000546304 UAP1L1Q3KQV9 507 aa6.2□□□□□ -1.42
PRKDC-211ENST00000546304 KBTBD12Q3ZCT8 623 aa6.2□□□□□ -1.42
PRKDC-211ENST00000546304 SYTL3Q4VX76 610 aa6.2□□□□□ -1.42
PRKDC-211ENST00000546304 TEDDM1Q5T9Z0 273 aa6.2□□□□□ -1.42
PRKDC-211ENST00000546304 STPG1Q5TH74 334 aa6.2□□□□□ -1.42
PRKDC-211ENST00000546304 PTRHD1Q6GMV3 140 aaKnown RBP6.2□□□□□ -1.42
PRKDC-211ENST00000546304 EMBQ6PCB8 327 aa6.2□□□□□ -1.42
PRKDC-211ENST00000546304 TMEM220Q6QAJ8 160 aa6.2□□□□□ -1.42
PRKDC-211ENST00000546304 C3orf62Q6ZUJ4 267 aa6.2□□□□□ -1.42
PRKDC-211ENST00000546304 TRMT10CQ7L0Y3 403 aaKnown RBP6.2□□□□□ -1.42
PRKDC-211ENST00000546304 TMPRSS7Q7RTY8 843 aa6.2□□□□□ -1.42
PRKDC-211ENST00000546304 TAF8Q7Z7C8 310 aa6.2□□□□□ -1.42
PRKDC-211ENST00000546304 AMZ2Q86W34 360 aa6.2□□□□□ -1.42
PRKDC-211ENST00000546304 SLC26A11Q86WA9 606 aa6.2□□□□□ -1.42
PRKDC-211ENST00000546304 GKN2Q86XP6 184 aa6.2□□□□□ -1.42
PRKDC-211ENST00000546304 NRROSQ86YC3 692 aa6.2□□□□□ -1.42
PRKDC-211ENST00000546304 NAXDQ8IW45 347 aa6.2□□□□□ -1.42
PRKDC-211ENST00000546304 CTAGE3PQ8IX95 158 aa6.2□□□□□ -1.42
PRKDC-211ENST00000546304 KIAA2013Q8IYS2 634 aa6.2□□□□□ -1.42
PRKDC-211ENST00000546304 SDR16C5Q8N3Y7 309 aa6.2□□□□□ -1.42
PRKDC-211ENST00000546304 SLC25A45Q8N413 288 aa6.2□□□□□ -1.42
PRKDC-211ENST00000546304 KYQ8NBH2 561 aa6.2□□□□□ -1.42
PRKDC-211ENST00000546304 OR4C6Q8NH72 309 aa6.2□□□□□ -1.42
PRKDC-211ENST00000546304 CCL4L1Q8NHW4 92 aa6.2□□□□□ -1.42
PRKDC-211ENST00000546304 LKAAEAR1Q8TD35 194 aa6.2□□□□□ -1.42
PRKDC-211ENST00000546304 AENQ8WTP8 325 aaKnown RBP6.2□□□□□ -1.42
PRKDC-211ENST00000546304 KCNJ9Q92806 393 aa6.2□□□□□ -1.42
PRKDC-211ENST00000546304 ATXN7L3BQ96GX2 97 aa6.2□□□□□ -1.42
PRKDC-211ENST00000546304 LINC00615Q96LM1 132 aaPredicted RBP6.2□□□□□ -1.42
PRKDC-211ENST00000546304 Q96M66 194 aa6.2□□□□□ -1.42
PRKDC-211ENST00000546304 BIRC8Q96P09 236 aa6.2□□□□□ -1.42
PRKDC-211ENST00000546304 PANX3Q96QZ0 392 aa6.2□□□□□ -1.42
PRKDC-211ENST00000546304 NDNQ99608 321 aa6.2□□□□□ -1.42
PRKDC-211ENST00000546304 TSSK1BQ9BXA7 367 aa6.2□□□□□ -1.42
PRKDC-211ENST00000546304 TXLNGYQ9BZA5 131 aa6.2□□□□□ -1.42
PRKDC-211ENST00000546304 CCDC68Q9H2F9 335 aa6.2□□□□□ -1.42
PRKDC-211ENST00000546304 COG4Q9H9E3 785 aa6.2□□□□□ -1.42
PRKDC-211ENST00000546304 PRDM7Q9NQW5 492 aa6.2□□□□□ -1.42
PRKDC-211ENST00000546304 SMYD2Q9NRG4 433 aa6.2□□□□□ -1.42
PRKDC-211ENST00000546304 KLC4Q9NSK0 619 aa6.2□□□□□ -1.42
PRKDC-211ENST00000546304 NLGN3Q9NZ94 848 aa6.2□□□□□ -1.42
PRKDC-211ENST00000546304 TAAR2Q9P1P5 351 aa6.2□□□□□ -1.42
PRKDC-211ENST00000546304 TXNDC16Q9P2K2 825 aa6.2□□□□□ -1.42
PRKDC-211ENST00000546304 GULP1Q9UBP9 304 aa6.2□□□□□ -1.42
PRKDC-211ENST00000546304 CORO1CQ9ULV4 474 aaPredicted RBP6.2□□□□□ -1.42
PRKDC-211ENST00000546304 GPR34Q9UPC5 381 aa6.2□□□□□ -1.42
PRKDC-211ENST00000546304 DNAJC16Q9Y2G8 782 aa6.2□□□□□ -1.42
PRKDC-211ENST00000546304 CRYL1Q9Y2S2 319 aa6.2□□□□□ -1.42
PRKDC-211ENST00000546304 PLEKHM1Q9Y4G2 1056 aa6.2□□□□□ -1.42
PRKDC-211ENST00000546304 PSAT1Q9Y617 370 aa6.2□□□□□ -1.42
PRKDC-211ENST00000546304 PRSS21Q9Y6M0 314 aa6.2□□□□□ -1.42
PRKDC-211ENST00000546304 CSNK1G3Q9Y6M4 447 aa6.2□□□□□ -1.42
PRKDC-211ENST00000546304 NCOR2Q9Y618 2525 aa6.2□□□□□ -1.42
PRKDC-211ENST00000546304 A0A087WUV0 522 aaPredicted RBP6.19□□□□□ -1.42
PRKDC-211ENST00000546304 A6NCN8 305 aa6.19□□□□□ -1.42
PRKDC-211ENST00000546304 MGAT4DA6NG13 374 aa6.19□□□□□ -1.42
PRKDC-211ENST00000546304 IQCF5A8MTL0 148 aa6.19□□□□□ -1.42
PRKDC-211ENST00000546304 CXorf49A8MYA2 514 aaPredicted RBP6.19□□□□□ -1.42
PRKDC-211ENST00000546304 E5RI56 91 aa6.19□□□□□ -1.42
PRKDC-211ENST00000546304 TRIM38O00635 465 aa6.19□□□□□ -1.42
PRKDC-211ENST00000546304 TPP1O14773 563 aa6.19□□□□□ -1.42
PRKDC-211ENST00000546304 POP7O75817 140 aaKnown RBP6.19□□□□□ -1.42
PRKDC-211ENST00000546304 TUBBP07437 444 aa6.19□□□□□ -1.42
PRKDC-211ENST00000546304 SLC35G4P0C7Q5 338 aa6.19□□□□□ -1.42
PRKDC-211ENST00000546304 GIMD1P0DJR0 217 aa6.19□□□□□ -1.42
PRKDC-211ENST00000546304 F3P13726 295 aa6.19□□□□□ -1.42
PRKDC-211ENST00000546304 CD59P13987 128 aa6.19□□□□□ -1.42
PRKDC-211ENST00000546304 PKMP14618 531 aaKnown RBP6.19□□□□□ -1.42
PRKDC-211ENST00000546304 ITGB6P18564 788 aa6.19□□□□□ -1.42
PRKDC-211ENST00000546304 GABRB3P28472 473 aa6.19□□□□□ -1.42
PRKDC-211ENST00000546304 FMO4P31512 558 aa6.19□□□□□ -1.42
PRKDC-211ENST00000546304 GP5P40197 560 aa6.19□□□□□ -1.42
PRKDC-211ENST00000546304 LEPRP48357 1165 aaKnown RBP6.19□□□□□ -1.42
PRKDC-211ENST00000546304 CLCNKAP51800 687 aa6.19□□□□□ -1.42
PRKDC-211ENST00000546304 CSE1LP55060 971 aaKnown RBP6.19□□□□□ -1.42
PRKDC-211ENST00000546304 ARHGAP8P85298 464 aa6.19□□□□□ -1.42
PRKDC-211ENST00000546304 KLHL38Q2WGJ6 581 aa6.19□□□□□ -1.42
PRKDC-211ENST00000546304 MAP9Q49MG5 647 aa6.19□□□□□ -1.42
PRKDC-211ENST00000546304 ZNF658BQ4V348 819 aaPredicted RBP6.19□□□□□ -1.42
PRKDC-211ENST00000546304 RBM20Q5T481 1227 aaKnown RBP6.19□□□□□ -1.42
PRKDC-211ENST00000546304 ZCCHC8Q6NZY4 707 aaKnown RBP6.19□□□□□ -1.42
PRKDC-211ENST00000546304 ZNF549Q6P9A3 640 aa6.19□□□□□ -1.42
PRKDC-211ENST00000546304 CNSTQ6PJW8 725 aa6.19□□□□□ -1.42
PRKDC-211ENST00000546304 LVRNQ6Q4G3 990 aa6.19□□□□□ -1.42
PRKDC-211ENST00000546304 CCNI2Q6ZMN8 369 aaPredicted RBP6.19□□□□□ -1.42
PRKDC-211ENST00000546304 FAM83HQ6ZRV2 1179 aaPredicted RBP6.19□□□□□ -1.42
PRKDC-211ENST00000546304 CYS1Q717R9 158 aa6.19□□□□□ -1.42
PRKDC-211ENST00000546304 OTOAQ7RTW8 1153 aa6.19□□□□□ -1.42
PRKDC-211ENST00000546304 STRA8Q7Z7C7 330 aa6.19□□□□□ -1.42
PRKDC-211ENST00000546304 PIM3Q86V86 326 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms