RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 OVCA2Q8WZ82 227 aa6.34□□□□□ -1.39
SNHG1-225ENST00000545920 RORBQ92753 470 aa6.34□□□□□ -1.39
SNHG1-225ENST00000545920 GAL3ST3Q96A11 431 aa6.34□□□□□ -1.39
SNHG1-225ENST00000545920 FKBP10Q96AY3 582 aa6.34□□□□□ -1.39
SNHG1-225ENST00000545920 SLC47A1Q96FL8 570 aa6.34□□□□□ -1.39
SNHG1-225ENST00000545920 SH3YL1Q96HL8 342 aaPredicted RBP6.34□□□□□ -1.39
SNHG1-225ENST00000545920 REXO5Q96IC2 774 aaKnown RBP6.34□□□□□ -1.39
SNHG1-225ENST00000545920 MDFIQ99750 246 aa6.34□□□□□ -1.39
SNHG1-225ENST00000545920 APOL4Q9BPW4 351 aa6.34□□□□□ -1.39
SNHG1-225ENST00000545920 NTMT1Q9BV86 223 aa6.34□□□□□ -1.39
SNHG1-225ENST00000545920 LHPPQ9H008 270 aa6.34□□□□□ -1.39
SNHG1-225ENST00000545920 ATXN3LQ9H3M9 355 aa6.34□□□□□ -1.39
SNHG1-225ENST00000545920 TOR3AQ9H497 397 aa6.34□□□□□ -1.39
SNHG1-225ENST00000545920 EHD1Q9H4M9 534 aa6.34□□□□□ -1.39
SNHG1-225ENST00000545920 DUSP21Q9H596 190 aa6.34□□□□□ -1.39
SNHG1-225ENST00000545920 ACTR8Q9H981 624 aa6.34□□□□□ -1.39
SNHG1-225ENST00000545920 LIN28AQ9H9Z2 209 aaKnown RBP6.34□□□□□ -1.39
SNHG1-225ENST00000545920 IL1RL2Q9HB29 575 aa6.34□□□□□ -1.39
SNHG1-225ENST00000545920 RDH14Q9HBH5 336 aa6.34□□□□□ -1.39
SNHG1-225ENST00000545920 MOV10Q9HCE1 1003 aaKnown RBP6.34□□□□□ -1.39
SNHG1-225ENST00000545920 CPNE5Q9HCH3 593 aa6.34□□□□□ -1.39
SNHG1-225ENST00000545920 AKIP1Q9NQ31 210 aa6.34□□□□□ -1.39
SNHG1-225ENST00000545920 ACSS2Q9NR19 701 aa6.34□□□□□ -1.39
SNHG1-225ENST00000545920 DCAF13Q9NV06 445 aaKnown RBP6.34□□□□□ -1.39
SNHG1-225ENST00000545920 CD274Q9NZQ7 290 aa6.34□□□□□ -1.39
SNHG1-225ENST00000545920 SAMD4AQ9UPU9 718 aaKnown RBP6.34□□□□□ -1.39
SNHG1-225ENST00000545920 CRYL1Q9Y2S2 319 aa6.34□□□□□ -1.39
SNHG1-225ENST00000545920 DHRS7Q9Y394 339 aa6.34□□□□□ -1.39
SNHG1-225ENST00000545920 A0A096LPI6 279 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 CCL15-CCL14A0A0B4J2E2 113 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 UBA6A0AVT1 1052 aaPredicted RBP6.33□□□□□ -1.4
SNHG1-225ENST00000545920 ILVBLA1L0T0 632 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 FAM149AA5PLN7 773 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 CLDN24A6NM45 220 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 A8MVJ9 347 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 F5H5T6 163 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 H0Y626 953 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 H0Y858 1186 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 J3KR12 359 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 K7EPI3 171 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 M0R3G1 203 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 SLC1A7O00341 560 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 CXCR6O00574 342 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 GNGT2O14610 69 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 PRMT5O14744 637 aaPredicted RBP6.33□□□□□ -1.4
SNHG1-225ENST00000545920 INSIG1O15503 277 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 KDELR3O43731 214 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 DUSP11O75319 330 aaKnown RBP6.33□□□□□ -1.4
SNHG1-225ENST00000545920 BCAS1O75363 584 aaPredicted RBP6.33□□□□□ -1.4
SNHG1-225ENST00000545920 E2F6O75461 281 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 CLDN11O75508 207 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 CNTN5O94779 1100 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 CCNDBP1O95273 360 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 SIX3O95343 332 aaPredicted RBP6.33□□□□□ -1.4
SNHG1-225ENST00000545920 TRIM16O95361 564 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 LATS1O95835 1130 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 TSPAN12O95859 305 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 CST1P01037 141 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 CHRNA1P02708 482 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 F7P08709 466 aaPredicted RBP6.33□□□□□ -1.4
SNHG1-225ENST00000545920 EBLN1P0CF75 366 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 HAPLN1P10915 354 aaPredicted RBP6.33□□□□□ -1.4
SNHG1-225ENST00000545920 MTHFD1P11586 935 aaKnown RBP6.33□□□□□ -1.4
SNHG1-225ENST00000545920 ZNF182P17025 639 aaPredicted RBP6.33□□□□□ -1.4
SNHG1-225ENST00000545920 NELFEP18615 380 aaKnown RBP6.33□□□□□ -1.4
SNHG1-225ENST00000545920 MATN1P21941 496 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 PPIBP23284 216 aaKnown RBP6.33□□□□□ -1.4
SNHG1-225ENST00000545920 PRPH2P23942 346 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 OR1E1P30953 314 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 GNPDA1P46926 289 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 TRPC1P48995 793 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 TMED10P49755 219 aaKnown RBP6.33□□□□□ -1.4
SNHG1-225ENST00000545920 FOXA1P55317 472 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 OXCT1P55809 520 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 OR4D2P58180 307 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 C21orf58P58505 322 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 ISL1P61371 349 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 CACNG1Q06432 222 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.33□□□□□ -1.4
SNHG1-225ENST00000545920 CYP4F3Q08477 520 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 MGAT3Q09327 533 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 BNIP3Q12983 259 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 BFSP2Q13515 415 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 KIAA0040Q15053 153 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 MAPKAPK3Q16644 382 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 CCL15Q16663 113 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 DDR2Q16832 855 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 PLEKHG6Q3KR16 790 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 GGTA1PQ4G0N0 100 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 FBXO43Q4G163 708 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 RUNDC3AQ59EK9 446 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 PITRM1Q5JRX3 1037 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 TOR1AIP1Q5JTV8 583 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 MLIPQ5VWP3 458 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 CAPN13Q6MZZ7 669 aaPredicted RBP6.33□□□□□ -1.4
SNHG1-225ENST00000545920 FBXL22Q6P050 247 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 GALNT18Q6P9A2 607 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 CD300LGQ6UXG3 332 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 ADAMTSL4Q6UY14 1074 aa6.33□□□□□ -1.4
SNHG1-225ENST00000545920 Q6ZSR9 355 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms