RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 LGALS3BPQ08380 585 aa8.44□□□□□ -1.06
CLIP1-218ENST00000545889 DSC1Q08554 894 aa8.44□□□□□ -1.06
CLIP1-218ENST00000545889 SNTA1Q13424 505 aa8.44□□□□□ -1.06
CLIP1-218ENST00000545889 SEMA5AQ13591 1074 aa8.44□□□□□ -1.06
CLIP1-218ENST00000545889 ZNF423Q2M1K9 1284 aa8.44□□□□□ -1.06
CLIP1-218ENST00000545889 ANKDD1AQ495B1 522 aa8.44□□□□□ -1.06
CLIP1-218ENST00000545889 TBCELQ5QJ74 424 aa8.44□□□□□ -1.06
CLIP1-218ENST00000545889 ARMC4Q5T2S8 1044 aa8.44□□□□□ -1.06
CLIP1-218ENST00000545889 PRMT9Q6P2P2 845 aa8.44□□□□□ -1.06
CLIP1-218ENST00000545889 XKR5Q6UX68 686 aa8.44□□□□□ -1.06
CLIP1-218ENST00000545889 RABEPKQ7Z6M1 372 aa8.44□□□□□ -1.06
CLIP1-218ENST00000545889 DEFB123Q8N688 67 aa8.44□□□□□ -1.06
CLIP1-218ENST00000545889 ARMC5Q96C12 935 aa8.44□□□□□ -1.06
CLIP1-218ENST00000545889 UGT2B28Q9BY64 529 aa8.44□□□□□ -1.06
CLIP1-218ENST00000545889 MRPS26Q9BYN8 205 aaKnown RBP8.44□□□□□ -1.06
CLIP1-218ENST00000545889 SACM1LQ9NTJ5 587 aa8.44□□□□□ -1.06
CLIP1-218ENST00000545889 TMEM59LQ9UK28 342 aa8.44□□□□□ -1.06
CLIP1-218ENST00000545889 VPS4AQ9UN37 437 aa8.44□□□□□ -1.06
CLIP1-218ENST00000545889 TRPM7Q96QT4 1865 aa8.44□□□□□ -1.06
CLIP1-218ENST00000545889 FAM170BA6NMN3 283 aa8.44□□□□□ -1.06
CLIP1-218ENST00000545889 DCLK1O15075 740 aa8.44□□□□□ -1.06
CLIP1-218ENST00000545889 KCNH1O95259 989 aa8.44□□□□□ -1.06
CLIP1-218ENST00000545889 ADH1BP00325 375 aa8.44□□□□□ -1.06
CLIP1-218ENST00000545889 RCVRNP35243 200 aa8.44□□□□□ -1.06
CLIP1-218ENST00000545889 RPS15P62841 145 aaKnown RBP8.44□□□□□ -1.06
CLIP1-218ENST00000545889 TUBA4AP68366 448 aa8.44□□□□□ -1.06
CLIP1-218ENST00000545889 MRPS22P82650 360 aaKnown RBP8.44□□□□□ -1.06
CLIP1-218ENST00000545889 PTP4A2Q12974 167 aa8.44□□□□□ -1.06
CLIP1-218ENST00000545889 ANXA8L1Q5VT79 327 aa8.44□□□□□ -1.06
CLIP1-218ENST00000545889 KYAT3Q6YP21 454 aaKnown RBP8.44□□□□□ -1.06
CLIP1-218ENST00000545889 ZCCHC23Q6ZST2 131 aa8.44□□□□□ -1.06
CLIP1-218ENST00000545889 SLC39A11Q8N1S5 342 aa8.44□□□□□ -1.06
CLIP1-218ENST00000545889 TMEM145Q8NBT3 493 aa8.44□□□□□ -1.06
CLIP1-218ENST00000545889 RP9Q8TA86 221 aaKnown RBP8.44□□□□□ -1.06
CLIP1-218ENST00000545889 C8orf48Q96LL4 319 aa8.44□□□□□ -1.06
CLIP1-218ENST00000545889 BDH2Q9BUT1 245 aa8.44□□□□□ -1.06
CLIP1-218ENST00000545889 TAS2R1Q9NYW7 299 aa8.44□□□□□ -1.06
CLIP1-218ENST00000545889 FTSJ1Q9UET6 329 aa8.44□□□□□ -1.06
CLIP1-218ENST00000545889 FZD10Q9ULW2 581 aa8.44□□□□□ -1.06
CLIP1-218ENST00000545889 ILVBLA1L0T0 632 aa8.43□□□□□ -1.06
CLIP1-218ENST00000545889 A6NL46 340 aa8.43□□□□□ -1.06
CLIP1-218ENST00000545889 RFXANKO14593 260 aa8.43□□□□□ -1.06
CLIP1-218ENST00000545889 TPP1O14773 563 aa8.43□□□□□ -1.06
CLIP1-218ENST00000545889 VEGFDO43915 354 aa8.43□□□□□ -1.06
CLIP1-218ENST00000545889 DLGAP3O95886 979 aa8.43□□□□□ -1.06
CLIP1-218ENST00000545889 FOXN2P32314 431 aa8.43□□□□□ -1.06
CLIP1-218ENST00000545889 HNMTP50135 292 aa8.43□□□□□ -1.06
CLIP1-218ENST00000545889 SLC7A2P52569 658 aa8.43□□□□□ -1.06
CLIP1-218ENST00000545889 LAPTM5Q13571 262 aa8.43□□□□□ -1.06
CLIP1-218ENST00000545889 FAM91A1Q658Y4 838 aa8.43□□□□□ -1.06
CLIP1-218ENST00000545889 GCNT7Q6ZNI0 430 aa8.43□□□□□ -1.06
CLIP1-218ENST00000545889 ZNF572Q7Z3I7 529 aaPredicted RBP8.43□□□□□ -1.06
CLIP1-218ENST00000545889 STK32CQ86UX6 486 aa8.43□□□□□ -1.06
CLIP1-218ENST00000545889 KLHL6Q8WZ60 621 aa8.43□□□□□ -1.06
CLIP1-218ENST00000545889 NPY6RQ99463 290 aa8.43□□□□□ -1.06
CLIP1-218ENST00000545889 MRPL57Q9BQC6 102 aaKnown RBP8.43□□□□□ -1.06
CLIP1-218ENST00000545889 FNDC11Q9BVV2 318 aa8.43□□□□□ -1.06
CLIP1-218ENST00000545889 ZNF576Q9H609 170 aa8.43□□□□□ -1.06
CLIP1-218ENST00000545889 PNO1Q9NRX1 252 aaKnown RBP8.43□□□□□ -1.06
CLIP1-218ENST00000545889 KCNK6Q9Y257 313 aa8.43□□□□□ -1.06
CLIP1-218ENST00000545889 CAPN14A8MX76 684 aa8.43□□□□□ -1.06
CLIP1-218ENST00000545889 MATN3O15232 486 aa8.43□□□□□ -1.06
CLIP1-218ENST00000545889 ZNF217O75362 1048 aa8.43□□□□□ -1.06
CLIP1-218ENST00000545889 PRKCGP05129 697 aa8.43□□□□□ -1.06
CLIP1-218ENST00000545889 PRG2P13727 222 aa8.43□□□□□ -1.06
CLIP1-218ENST00000545889 FASP25445 335 aa8.43□□□□□ -1.06
CLIP1-218ENST00000545889 SOX6P35712 828 aa8.43□□□□□ -1.06
CLIP1-218ENST00000545889 GRIA2P42262 883 aa8.43□□□□□ -1.06
CLIP1-218ENST00000545889 PREPP48147 710 aa8.43□□□□□ -1.06
CLIP1-218ENST00000545889 FAM189BP81408 668 aa8.43□□□□□ -1.06
CLIP1-218ENST00000545889 SLC25A11Q02978 314 aaKnown RBP8.43□□□□□ -1.06
CLIP1-218ENST00000545889 C2orf80Q0P641 193 aa8.43□□□□□ -1.06
CLIP1-218ENST00000545889 RUNX3Q13761 415 aa8.43□□□□□ -1.06
CLIP1-218ENST00000545889 SIM2Q14190 667 aaPredicted RBP8.43□□□□□ -1.06
CLIP1-218ENST00000545889 NOMO1Q15155 1222 aa8.43□□□□□ -1.06
CLIP1-218ENST00000545889 NRF1Q16656 503 aa8.43□□□□□ -1.06
CLIP1-218ENST00000545889 CPTPQ5TA50 214 aa8.43□□□□□ -1.06
CLIP1-218ENST00000545889 MED27Q6P2C8 311 aa8.43□□□□□ -1.06
CLIP1-218ENST00000545889 AAGABQ6PD74 315 aa8.43□□□□□ -1.06
CLIP1-218ENST00000545889 PAQR9Q6ZVX9 377 aa8.43□□□□□ -1.06
CLIP1-218ENST00000545889 CCDC103Q8IW40 242 aa8.43□□□□□ -1.06
CLIP1-218ENST00000545889 ULK2Q8IYT8 1036 aa8.43□□□□□ -1.06
CLIP1-218ENST00000545889 SLC7A6OSQ96CW6 309 aaPredicted RBP8.43□□□□□ -1.06
CLIP1-218ENST00000545889 APOPT1Q96IL0 206 aa8.43□□□□□ -1.06
CLIP1-218ENST00000545889 GPR21Q99679 349 aa8.43□□□□□ -1.06
CLIP1-218ENST00000545889 EBNA1BP2Q99848 306 aaKnown RBP8.43□□□□□ -1.06
CLIP1-218ENST00000545889 FAM83CQ9BQN1 747 aa8.43□□□□□ -1.06
CLIP1-218ENST00000545889 RIOK2Q9BVS4 552 aaKnown RBP8.43□□□□□ -1.06
CLIP1-218ENST00000545889 TBL1XR1Q9BZK7 514 aa8.43□□□□□ -1.06
CLIP1-218ENST00000545889 ADAP2Q9NPF8 381 aa8.43□□□□□ -1.06
CLIP1-218ENST00000545889 TRPS1Q9UHF7 1281 aa8.43□□□□□ -1.06
CLIP1-218ENST00000545889 PCYOX1Q9UHG3 505 aa8.43□□□□□ -1.06
CLIP1-218ENST00000545889 BTRCQ9Y297 605 aa8.43□□□□□ -1.06
CLIP1-218ENST00000545889 TLR6Q9Y2C9 796 aa8.43□□□□□ -1.06
CLIP1-218ENST00000545889 WWP2O00308 870 aa8.43□□□□□ -1.06
CLIP1-218ENST00000545889 CYP11A1P05108 521 aa8.43□□□□□ -1.06
CLIP1-218ENST00000545889 MSL3P1P0C860 447 aa8.43□□□□□ -1.06
CLIP1-218ENST00000545889 HGFP14210 728 aa8.43□□□□□ -1.06
CLIP1-218ENST00000545889 RPL14P50914 215 aaKnown RBP8.43□□□□□ -1.06
CLIP1-218ENST00000545889 GDF10P55107 478 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms