RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 LILRA3Q8N6C8 439 aaPredicted RBP7.18□□□□□ -1.26
CPSF7-224ENST00000544990 OTUD6BQ8N6M0 293 aa7.18□□□□□ -1.26
CPSF7-224ENST00000544990 ACVR1CQ8NER5 493 aa7.18□□□□□ -1.26
CPSF7-224ENST00000544990 GPR150Q8NGU9 434 aa7.18□□□□□ -1.26
CPSF7-224ENST00000544990 CPT1BQ92523 772 aa7.18□□□□□ -1.26
CPSF7-224ENST00000544990 RSC1A1Q92681 617 aa7.18□□□□□ -1.26
CPSF7-224ENST00000544990 TFGQ92734 400 aaPredicted RBP7.18□□□□□ -1.26
CPSF7-224ENST00000544990 ART4Q93070 314 aa7.18□□□□□ -1.26
CPSF7-224ENST00000544990 MFSD3Q96ES6 412 aa7.18□□□□□ -1.26
CPSF7-224ENST00000544990 CAPZA3Q96KX2 299 aa7.18□□□□□ -1.26
CPSF7-224ENST00000544990 C9orf72Q96LT7 481 aa7.18□□□□□ -1.26
CPSF7-224ENST00000544990 RMDN2Q96LZ7 410 aa7.18□□□□□ -1.26
CPSF7-224ENST00000544990 TGM7Q96PF1 710 aa7.18□□□□□ -1.26
CPSF7-224ENST00000544990 TEFMQ96QE5 360 aaKnown RBP7.18□□□□□ -1.26
CPSF7-224ENST00000544990 PANX3Q96QZ0 392 aa7.18□□□□□ -1.26
CPSF7-224ENST00000544990 ZPBPQ9BS86 351 aa7.18□□□□□ -1.26
CPSF7-224ENST00000544990 DDA1Q9BW61 102 aa7.18□□□□□ -1.26
CPSF7-224ENST00000544990 CARD6Q9BX69 1037 aa7.18□□□□□ -1.26
CPSF7-224ENST00000544990 DDX47Q9H0S4 455 aaKnown RBP7.18□□□□□ -1.26
CPSF7-224ENST00000544990 OR52A5Q9H2C5 316 aa7.18□□□□□ -1.26
CPSF7-224ENST00000544990 KIR3DX1Q9H7L2 352 aa7.18□□□□□ -1.26
CPSF7-224ENST00000544990 MVB12BQ9H7P6 319 aa7.18□□□□□ -1.26
CPSF7-224ENST00000544990 FBXO8Q9NRD0 319 aa7.18□□□□□ -1.26
CPSF7-224ENST00000544990 TREX1Q9NSU2 369 aa7.18□□□□□ -1.26
CPSF7-224ENST00000544990 OCIAD1Q9NX40 245 aa7.18□□□□□ -1.26
CPSF7-224ENST00000544990 SYBUQ9NX95 663 aa7.18□□□□□ -1.26
CPSF7-224ENST00000544990 OGFRQ9NZT2 677 aa7.18□□□□□ -1.26
CPSF7-224ENST00000544990 ASIC3Q9UHC3 531 aa7.18□□□□□ -1.26
CPSF7-224ENST00000544990 SLC24A2Q9UI40 661 aa7.18□□□□□ -1.26
CPSF7-224ENST00000544990 ACSL6Q9UKU0 697 aa7.18□□□□□ -1.26
CPSF7-224ENST00000544990 PYCARDQ9ULZ3 195 aa7.18□□□□□ -1.26
CPSF7-224ENST00000544990 NEU2Q9Y3R4 380 aa7.18□□□□□ -1.26
CPSF7-224ENST00000544990 PCDHGA3Q9Y5H0 932 aa7.18□□□□□ -1.26
CPSF7-224ENST00000544990 PRSS21Q9Y6M0 314 aa7.18□□□□□ -1.26
CPSF7-224ENST00000544990 MN1Q10571 1320 aaPredicted RBP7.18□□□□□ -1.26
CPSF7-224ENST00000544990 FAM237BA0A1B0GVD1 139 aa7.17□□□□□ -1.26
CPSF7-224ENST00000544990 UBA6A0AVT1 1052 aaPredicted RBP7.17□□□□□ -1.26
CPSF7-224ENST00000544990 OR5K3A6NET4 321 aa7.17□□□□□ -1.26
CPSF7-224ENST00000544990 C9orf172C9J069 976 aa7.17□□□□□ -1.26
CPSF7-224ENST00000544990 STMND1H3BQB6 276 aa7.17□□□□□ -1.26
CPSF7-224ENST00000544990 CCDC188H7C350 402 aa7.17□□□□□ -1.26
CPSF7-224ENST00000544990 MATN2O00339 956 aa7.17□□□□□ -1.26
CPSF7-224ENST00000544990 GNB5O14775 395 aa7.17□□□□□ -1.26
CPSF7-224ENST00000544990 KPNA5O15131 536 aa7.17□□□□□ -1.26
CPSF7-224ENST00000544990 POLR1CO15160 346 aaPredicted RBP7.17□□□□□ -1.26
CPSF7-224ENST00000544990 OR1I1O60431 355 aa7.17□□□□□ -1.26
CPSF7-224ENST00000544990 AVILO75366 819 aa7.17□□□□□ -1.26
CPSF7-224ENST00000544990 VAPBO95292 243 aa7.17□□□□□ -1.26
CPSF7-224ENST00000544990 APOA4P06727 396 aa7.17□□□□□ -1.26
CPSF7-224ENST00000544990 PDHA2P29803 388 aa7.17□□□□□ -1.26
CPSF7-224ENST00000544990 PREPP48147 710 aa7.17□□□□□ -1.26
CPSF7-224ENST00000544990 GFERP55789 205 aa7.17□□□□□ -1.26
CPSF7-224ENST00000544990 TMPRSS3P57727 454 aa7.17□□□□□ -1.26
CPSF7-224ENST00000544990 TLE3Q04726 772 aa7.17□□□□□ -1.26
CPSF7-224ENST00000544990 FOXM1Q08050 763 aa7.17□□□□□ -1.26
CPSF7-224ENST00000544990 THOC5Q13769 683 aaKnown RBP7.17□□□□□ -1.26
CPSF7-224ENST00000544990 BOP1Q14137 746 aaKnown RBP7.17□□□□□ -1.26
CPSF7-224ENST00000544990 SEMA3AQ14563 771 aa7.17□□□□□ -1.26
CPSF7-224ENST00000544990 BRD3Q15059 726 aa7.17□□□□□ -1.26
CPSF7-224ENST00000544990 TMED2Q15363 201 aa7.17□□□□□ -1.26
CPSF7-224ENST00000544990 DNTTIP2Q5QJE6 756 aaKnown RBP7.17□□□□□ -1.26
CPSF7-224ENST00000544990 RNF187Q5TA31 235 aaPredicted RBP7.17□□□□□ -1.26
CPSF7-224ENST00000544990 ANKRD22Q5VYY1 191 aa7.17□□□□□ -1.26
CPSF7-224ENST00000544990 PTRHD1Q6GMV3 140 aaKnown RBP7.17□□□□□ -1.26
CPSF7-224ENST00000544990 KIAA0930Q6ICG6 404 aaPredicted RBP7.17□□□□□ -1.26
CPSF7-224ENST00000544990 DUS1LQ6P1R4 473 aaKnown RBP7.17□□□□□ -1.26
CPSF7-224ENST00000544990 SYDE1Q6ZW31 735 aaPredicted RBP7.17□□□□□ -1.26
CPSF7-224ENST00000544990 MICALCLQ6ZW33 695 aa7.17□□□□□ -1.26
CPSF7-224ENST00000544990 HDXQ7Z353 690 aa7.17□□□□□ -1.26
CPSF7-224ENST00000544990 PRSS42Q7Z5A4 293 aa7.17□□□□□ -1.26
CPSF7-224ENST00000544990 CAND1Q86VP6 1230 aaKnown RBP7.17□□□□□ -1.26
CPSF7-224ENST00000544990 LRRC6Q86X45 466 aa7.17□□□□□ -1.26
CPSF7-224ENST00000544990 NAT8LQ8N9F0 302 aa7.17□□□□□ -1.26
CPSF7-224ENST00000544990 GABPB2Q8TAK5 448 aaPredicted RBP7.17□□□□□ -1.26
CPSF7-224ENST00000544990 GSDMBQ8TAX9 411 aa7.17□□□□□ -1.26
CPSF7-224ENST00000544990 ASZ1Q8WWH4 475 aa7.17□□□□□ -1.26
CPSF7-224ENST00000544990 SLCO2A1Q92959 643 aa7.17□□□□□ -1.26
CPSF7-224ENST00000544990 SERPINB12Q96P63 405 aa7.17□□□□□ -1.26
CPSF7-224ENST00000544990 CD180Q99467 661 aa7.17□□□□□ -1.26
CPSF7-224ENST00000544990 SRMSQ9H3Y6 488 aa7.17□□□□□ -1.26
CPSF7-224ENST00000544990 ZNF768Q9H5H4 540 aaKnown RBP7.17□□□□□ -1.26
CPSF7-224ENST00000544990 HRASLS2Q9NWW9 162 aa7.17□□□□□ -1.26
CPSF7-224ENST00000544990 NOP53Q9NZM5 478 aaKnown RBP7.17□□□□□ -1.26
CPSF7-224ENST00000544990 FOXJ2Q9P0K8 574 aa7.17□□□□□ -1.26
CPSF7-224ENST00000544990 PCYOX1Q9UHG3 505 aa7.17□□□□□ -1.26
CPSF7-224ENST00000544990 POLG2Q9UHN1 485 aa7.17□□□□□ -1.26
CPSF7-224ENST00000544990 GNPTGQ9UJJ9 305 aa7.17□□□□□ -1.26
CPSF7-224ENST00000544990 ASF1AQ9Y294 204 aa7.17□□□□□ -1.26
CPSF7-224ENST00000544990 FRYQ5TBA9 3013 aa7.17□□□□□ -1.26
CPSF7-224ENST00000544990 ZFHX4Q86UP3 3567 aa7.16□□□□□ -1.26
CPSF7-224ENST00000544990 SLC5A10A0PJK1 596 aa7.16□□□□□ -1.26
CPSF7-224ENST00000544990 OR6C74A6NCV1 312 aa7.16□□□□□ -1.26
CPSF7-224ENST00000544990 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.16□□□□□ -1.26
CPSF7-224ENST00000544990 H3BMM5 538 aa7.16□□□□□ -1.26
CPSF7-224ENST00000544990 GOLGA8MH3BSY2 632 aa7.16□□□□□ -1.26
CPSF7-224ENST00000544990 DNALI1O14645 258 aaPredicted RBP7.16□□□□□ -1.26
CPSF7-224ENST00000544990 NDC80O14777 642 aa7.16□□□□□ -1.26
CPSF7-224ENST00000544990 USP1O94782 785 aa7.16□□□□□ -1.26
CPSF7-224ENST00000544990 TMEM63AO94886 807 aa7.16□□□□□ -1.26
CPSF7-224ENST00000544990 RPN2P04844 631 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms