RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-222ENST00000544585 SLC9A4Q6AI14 798 aa6.1□□□□□ -1.43
CPSF7-222ENST00000544585 RBM44Q6ZP01 1051 aaKnown RBP6.1□□□□□ -1.43
CPSF7-222ENST00000544585 METTL25Q8N6Q8 603 aa6.1□□□□□ -1.43
CPSF7-222ENST00000544585 WFDC5Q8TCV5 224 aa6.1□□□□□ -1.43
CPSF7-222ENST00000544585 TAS1R2Q8TE23 839 aa6.1□□□□□ -1.43
CPSF7-222ENST00000544585 ATG4AQ8WYN0 398 aa6.1□□□□□ -1.43
CPSF7-222ENST00000544585 NDRG1Q92597 394 aaKnown RBP6.1□□□□□ -1.43
CPSF7-222ENST00000544585 ATXN7L3BQ96GX2 97 aa6.1□□□□□ -1.43
CPSF7-222ENST00000544585 FAR2Q96K12 515 aa6.1□□□□□ -1.43
CPSF7-222ENST00000544585 MNTQ99583 582 aa6.1□□□□□ -1.43
CPSF7-222ENST00000544585 IL12RB2Q99665 862 aa6.1□□□□□ -1.43
CPSF7-222ENST00000544585 FUZQ9BT04 418 aa6.1□□□□□ -1.43
CPSF7-222ENST00000544585 SLC25A18Q9H1K4 315 aa6.1□□□□□ -1.43
CPSF7-222ENST00000544585 GHITMQ9H3K2 345 aa6.1□□□□□ -1.43
CPSF7-222ENST00000544585 CISHQ9NSE2 258 aa6.1□□□□□ -1.43
CPSF7-222ENST00000544585 SEPT10Q9P0V9 454 aa6.1□□□□□ -1.43
CPSF7-222ENST00000544585 SLC12A6Q9UHW9 1150 aa6.1□□□□□ -1.43
CPSF7-222ENST00000544585 IPO11Q9UI26 975 aaKnown RBP6.1□□□□□ -1.43
CPSF7-222ENST00000544585 LOC105369274A0A096LPK9 316 aa6.09□□□□□ -1.43
CPSF7-222ENST00000544585 LY6G6EA0A0G2JKS1 128 aa6.09□□□□□ -1.43
CPSF7-222ENST00000544585 LOC102723532A0A0G2JNH3 316 aa6.09□□□□□ -1.43
CPSF7-222ENST00000544585 CAPN14A8MX76 684 aa6.09□□□□□ -1.43
CPSF7-222ENST00000544585 PSMD9O00233 223 aa6.09□□□□□ -1.43
CPSF7-222ENST00000544585 POLR2DO15514 142 aaKnown RBP6.09□□□□□ -1.43
CPSF7-222ENST00000544585 AHCYL1O43865 530 aa6.09□□□□□ -1.43
CPSF7-222ENST00000544585 STX10O60499 249 aa6.09□□□□□ -1.43
CPSF7-222ENST00000544585 PLOD3O60568 738 aa6.09□□□□□ -1.43
CPSF7-222ENST00000544585 PPFIA2O75334 1257 aa6.09□□□□□ -1.43
CPSF7-222ENST00000544585 CSF2P04141 144 aa6.09□□□□□ -1.43
CPSF7-222ENST00000544585 NR3C1P04150 777 aa6.09□□□□□ -1.43
CPSF7-222ENST00000544585 KRT10P13645 584 aa6.09□□□□□ -1.43
CPSF7-222ENST00000544585 TNNT1P13805 278 aa6.09□□□□□ -1.43
CPSF7-222ENST00000544585 HNRNPA2B1P22626 353 aaKnown RBP6.09□□□□□ -1.43
CPSF7-222ENST00000544585 ARL3P36405 182 aa6.09□□□□□ -1.43
CPSF7-222ENST00000544585 GCLMP48507 274 aa6.09□□□□□ -1.43
CPSF7-222ENST00000544585 PCP4P48539 62 aa6.09□□□□□ -1.43
CPSF7-222ENST00000544585 LINC00310P59036 64 aa6.09□□□□□ -1.43
CPSF7-222ENST00000544585 DAOAP59103 153 aa6.09□□□□□ -1.43
CPSF7-222ENST00000544585 YWHAEP62258 255 aaKnown RBP6.09□□□□□ -1.43
CPSF7-222ENST00000544585 RPS24P62847 133 aaKnown RBP6.09□□□□□ -1.43
CPSF7-222ENST00000544585 ADIGQ0VDE8 80 aa6.09□□□□□ -1.43
CPSF7-222ENST00000544585 CNTN1Q12860 1018 aa6.09□□□□□ -1.43
CPSF7-222ENST00000544585 STK4Q13043 487 aa6.09□□□□□ -1.43
CPSF7-222ENST00000544585 MPP3Q13368 585 aa6.09□□□□□ -1.43
CPSF7-222ENST00000544585 DLG2Q15700 870 aa6.09□□□□□ -1.43
CPSF7-222ENST00000544585 POM121L1PQ3SYA9 428 aa6.09□□□□□ -1.43
CPSF7-222ENST00000544585 NRN1LQ496H8 165 aa6.09□□□□□ -1.43
CPSF7-222ENST00000544585 PDCD4Q53EL6 469 aaKnown RBP6.09□□□□□ -1.43
CPSF7-222ENST00000544585 FSCBQ5H9T9 825 aa6.09□□□□□ -1.43
CPSF7-222ENST00000544585 C1orf220Q5T0J3 134 aa6.09□□□□□ -1.43
CPSF7-222ENST00000544585 DENND1BQ6P3S1 775 aa6.09□□□□□ -1.43
CPSF7-222ENST00000544585 FAM173BQ6P4H8 233 aa6.09□□□□□ -1.43
CPSF7-222ENST00000544585 Q6ZSR6 202 aa6.09□□□□□ -1.43
CPSF7-222ENST00000544585 H1FNTQ75WM6 255 aaPredicted RBP6.09□□□□□ -1.43
CPSF7-222ENST00000544585 ENOSF1Q7L5Y1 443 aa6.09□□□□□ -1.43
CPSF7-222ENST00000544585 BHLHA9Q7RTU4 235 aa6.09□□□□□ -1.43
CPSF7-222ENST00000544585 EFL1Q7Z2Z2 1120 aaKnown RBP6.09□□□□□ -1.43
CPSF7-222ENST00000544585 ZSCAN30Q86W11 494 aa6.09□□□□□ -1.43
CPSF7-222ENST00000544585 HORMAD1Q86X24 394 aa6.09□□□□□ -1.43
CPSF7-222ENST00000544585 P3H2Q8IVL5 708 aa6.09□□□□□ -1.43
CPSF7-222ENST00000544585 APCDD1Q8J025 514 aa6.09□□□□□ -1.43
CPSF7-222ENST00000544585 OR4N4Q8N0Y3 316 aa6.09□□□□□ -1.43
CPSF7-222ENST00000544585 FAM109AQ8N4B1 249 aa6.09□□□□□ -1.43
CPSF7-222ENST00000544585 FBXO39Q8N4B4 442 aa6.09□□□□□ -1.43
CPSF7-222ENST00000544585 LSMEM1Q8N8F7 131 aa6.09□□□□□ -1.43
CPSF7-222ENST00000544585 PTGR2Q8N8N7 351 aaPredicted RBP6.09□□□□□ -1.43
CPSF7-222ENST00000544585 LINC00301Q8NCQ3 95 aa6.09□□□□□ -1.43
CPSF7-222ENST00000544585 SLC2A12Q8TD20 617 aa6.09□□□□□ -1.43
CPSF7-222ENST00000544585 NAT6Q93015 286 aa6.09□□□□□ -1.43
CPSF7-222ENST00000544585 VPS50Q96JG6 964 aa6.09□□□□□ -1.43
CPSF7-222ENST00000544585 FEM1CQ96JP0 617 aa6.09□□□□□ -1.43
CPSF7-222ENST00000544585 HSFY1Q96LI6 401 aa6.09□□□□□ -1.43
CPSF7-222ENST00000544585 SERPINB11Q96P15 392 aa6.09□□□□□ -1.43
CPSF7-222ENST00000544585 USP28Q96RU2 1077 aa6.09□□□□□ -1.43
CPSF7-222ENST00000544585 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.09□□□□□ -1.43
CPSF7-222ENST00000544585 DPCDQ9BVM2 203 aaPredicted RBP6.09□□□□□ -1.43
CPSF7-222ENST00000544585 CALN1Q9BXU9 219 aa6.09□□□□□ -1.43
CPSF7-222ENST00000544585 TRIM4Q9C037 500 aa6.09□□□□□ -1.43
CPSF7-222ENST00000544585 MEGF9Q9H1U4 602 aa6.09□□□□□ -1.43
CPSF7-222ENST00000544585 BLZF1Q9H2G9 400 aa6.09□□□□□ -1.43
CPSF7-222ENST00000544585 STN1Q9H668 368 aaKnown RBP6.09□□□□□ -1.43
CPSF7-222ENST00000544585 TRIM36Q9NQ86 728 aa6.09□□□□□ -1.43
CPSF7-222ENST00000544585 EIF2B3Q9NR50 452 aaKnown RBP6.09□□□□□ -1.43
CPSF7-222ENST00000544585 RAB20Q9NX57 234 aa6.09□□□□□ -1.43
CPSF7-222ENST00000544585 TSPAN16Q9UKR8 245 aa6.09□□□□□ -1.43
CPSF7-222ENST00000544585 RAB21Q9UL25 225 aa6.09□□□□□ -1.43
CPSF7-222ENST00000544585 CAMK2AQ9UQM7 478 aa6.09□□□□□ -1.43
CPSF7-222ENST00000544585 TRAF3IP3Q9Y228 551 aa6.09□□□□□ -1.43
CPSF7-222ENST00000544585 SLC30A1Q9Y6M5 507 aa6.09□□□□□ -1.43
CPSF7-222ENST00000544585 U3KQA8 63 aa6.09□□□□□ -1.43
CPSF7-222ENST00000544585 TENM4Q6N022 2769 aa6.08□□□□□ -1.44
CPSF7-222ENST00000544585 DOPEY2Q9Y3R5 2298 aa6.08□□□□□ -1.44
CPSF7-222ENST00000544585 SPTY2D1-AS1A0A0U1RR47 76 aa6.08□□□□□ -1.44
CPSF7-222ENST00000544585 A0A1W2PNU3 283 aaPredicted RBP6.08□□□□□ -1.44
CPSF7-222ENST00000544585 MBD3L5A6NJ08 208 aaPredicted RBP6.08□□□□□ -1.44
CPSF7-222ENST00000544585 ZAR1LA6NP61 321 aa6.08□□□□□ -1.44
CPSF7-222ENST00000544585 M0QYT0 321 aa6.08□□□□□ -1.44
CPSF7-222ENST00000544585 TULP2O00295 520 aa6.08□□□□□ -1.44
CPSF7-222ENST00000544585 AP3D1O14617 1153 aa6.08□□□□□ -1.44
CPSF7-222ENST00000544585 PPM1DO15297 605 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms