RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 OR5M8Q8NGP6 311 aa3.57□□□□□ -1.84
SCFD1-207ENST00000544052 GDAP1Q8TB36 358 aa3.57□□□□□ -1.84
SCFD1-207ENST00000544052 SMPDL3BQ92485 455 aa3.57□□□□□ -1.84
SCFD1-207ENST00000544052 DAZLQ92904 295 aaKnown RBP3.57□□□□□ -1.84
SCFD1-207ENST00000544052 OXNAD1Q96HP4 312 aaPredicted RBP3.57□□□□□ -1.84
SCFD1-207ENST00000544052 CCDC114Q96M63 670 aa3.57□□□□□ -1.84
SCFD1-207ENST00000544052 SF3B5Q9BWJ5 86 aaKnown RBP3.57□□□□□ -1.84
SCFD1-207ENST00000544052 ARGLU1Q9NWB6 273 aaPredicted RBP3.57□□□□□ -1.84
SCFD1-207ENST00000544052 GAGE2DQ9UEU5 116 aa3.57□□□□□ -1.84
SCFD1-207ENST00000544052 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.57□□□□□ -1.843e-6■□□□□ 10.3
SCFD1-207ENST00000544052 NHSQ6T4R5 1651 aa3.57□□□□□ -1.84
SCFD1-207ENST00000544052 CPDO75976 1380 aa3.57□□□□□ -1.84
SCFD1-207ENST00000544052 EIF3AQ14152 1382 aaKnown RBP3.57□□□□□ -1.84
SCFD1-207ENST00000544052 GPRASP1Q5JY77 1395 aa3.57□□□□□ -1.84
SCFD1-207ENST00000544052 COL24A1Q17RW2 1714 aa3.57□□□□□ -1.84
SCFD1-207ENST00000544052 C5orf60A6NFR6 353 aa3.56□□□□□ -1.84
SCFD1-207ENST00000544052 SRRM3A6NNA2 597 aaPredicted RBP3.56□□□□□ -1.84
SCFD1-207ENST00000544052 WDR46O15213 610 aaKnown RBP3.56□□□□□ -1.84
SCFD1-207ENST00000544052 OR10H2O60403 315 aa3.56□□□□□ -1.84
SCFD1-207ENST00000544052 LDB3O75112 727 aa3.56□□□□□ -1.84
SCFD1-207ENST00000544052 ZFYP08048 801 aaPredicted RBP3.56□□□□□ -1.84
SCFD1-207ENST00000544052 OR2T7P0C7T2 308 aa3.56□□□□□ -1.84
SCFD1-207ENST00000544052 LINC00271P0C7V0 271 aa3.56□□□□□ -1.84
SCFD1-207ENST00000544052 TCF4P15884 667 aa3.56□□□□□ -1.84
SCFD1-207ENST00000544052 POLR2LP62875 67 aaKnown RBP3.56□□□□□ -1.84
SCFD1-207ENST00000544052 PLIN5Q00G26 463 aa3.56□□□□□ -1.84
SCFD1-207ENST00000544052 TUBB2AQ13885 445 aa3.56□□□□□ -1.84
SCFD1-207ENST00000544052 EFHC1Q5JVL4 640 aa3.56□□□□□ -1.84
SCFD1-207ENST00000544052 TMPRSS11FQ6ZWK6 438 aa3.56□□□□□ -1.84
SCFD1-207ENST00000544052 DET1Q7L5Y6 550 aa3.56□□□□□ -1.84
SCFD1-207ENST00000544052 PIWIL3Q7Z3Z3 882 aaKnown RBP3.56□□□□□ -1.84
SCFD1-207ENST00000544052 SPATA19Q7Z5L4 167 aa3.56□□□□□ -1.84
SCFD1-207ENST00000544052 TMEM219Q86XT9 240 aa3.56□□□□□ -1.84
SCFD1-207ENST00000544052 ADHFE1Q8IWW8 467 aa3.56□□□□□ -1.84
SCFD1-207ENST00000544052 CCDC170Q8IYT3 715 aa3.56□□□□□ -1.84
SCFD1-207ENST00000544052 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.56□□□□□ -1.84
SCFD1-207ENST00000544052 BBS10Q8TAM1 723 aa3.56□□□□□ -1.84
SCFD1-207ENST00000544052 PPP4R1Q8TF05 950 aa3.56□□□□□ -1.84
SCFD1-207ENST00000544052 FAM216AQ8WUB2 273 aa3.56□□□□□ -1.84
SCFD1-207ENST00000544052 FAM162AQ96A26 154 aa3.56□□□□□ -1.84
SCFD1-207ENST00000544052 SLAMF9Q96A28 289 aa3.56□□□□□ -1.84
SCFD1-207ENST00000544052 EXOC4Q96A65 974 aa3.56□□□□□ -1.84
SCFD1-207ENST00000544052 OTUB1Q96FW1 271 aaPredicted RBP3.56□□□□□ -1.84
SCFD1-207ENST00000544052 ZNF48Q96MX3 618 aaPredicted RBP3.56□□□□□ -1.84
SCFD1-207ENST00000544052 MUS81Q96NY9 551 aa3.56□□□□□ -1.84
SCFD1-207ENST00000544052 OR1F2PQ96R84 312 aa3.56□□□□□ -1.84
SCFD1-207ENST00000544052 TUBB2BQ9BVA1 445 aa3.56□□□□□ -1.84
SCFD1-207ENST00000544052 WNT5BQ9H1J7 359 aa3.56□□□□□ -1.84
SCFD1-207ENST00000544052 MRPL44Q9H9J2 332 aaKnown RBP3.56□□□□□ -1.84
SCFD1-207ENST00000544052 AMDHD2Q9Y303 409 aa3.56□□□□□ -1.84
SCFD1-207ENST00000544052 YIPF1Q9Y548 306 aa3.56□□□□□ -1.84
SCFD1-207ENST00000544052 NFS1Q9Y697 457 aa3.56□□□□□ -1.84
SCFD1-207ENST00000544052 CPSF1Q10570 1443 aaKnown RBP3.56□□□□□ -1.84
SCFD1-207ENST00000544052 A4D1N5 150 aa3.56□□□□□ -1.84
SCFD1-207ENST00000544052 ENO4A6NNW6 628 aa3.56□□□□□ -1.84
SCFD1-207ENST00000544052 FAM86B1E9PN63 330 aa3.56□□□□□ -1.84
SCFD1-207ENST00000544052 PTGESO14684 152 aa3.56□□□□□ -1.84
SCFD1-207ENST00000544052 HOXC6P09630 235 aa3.56□□□□□ -1.84
SCFD1-207ENST00000544052 RAB40ALP0C0E4 278 aa3.56□□□□□ -1.84
SCFD1-207ENST00000544052 FAM86B2P0C5J1 330 aa3.56□□□□□ -1.84
SCFD1-207ENST00000544052 FAM58BPP0C7Q3 252 aa3.56□□□□□ -1.84
SCFD1-207ENST00000544052 POLR2CP19387 275 aaPredicted RBP3.56□□□□□ -1.84
SCFD1-207ENST00000544052 PSMC4P43686 418 aa3.56□□□□□ -1.84
SCFD1-207ENST00000544052 PDLIM4P50479 330 aa3.56□□□□□ -1.84
SCFD1-207ENST00000544052 DSC1Q08554 894 aa3.56□□□□□ -1.84
SCFD1-207ENST00000544052 NR1D2Q14995 579 aa3.56□□□□□ -1.84
SCFD1-207ENST00000544052 CALCRLQ16602 461 aa3.56□□□□□ -1.84
SCFD1-207ENST00000544052 C6orf136Q5SQH8 315 aa3.56□□□□□ -1.84
SCFD1-207ENST00000544052 GFRALQ6UXV0 394 aa3.56□□□□□ -1.84
SCFD1-207ENST00000544052 MAGEC3Q8TD91 643 aa3.56□□□□□ -1.84
SCFD1-207ENST00000544052 PHF21AQ96BD5 680 aa3.56□□□□□ -1.84
SCFD1-207ENST00000544052 HMCESQ96FZ2 354 aa3.56□□□□□ -1.84
SCFD1-207ENST00000544052 TMEM19Q96HH6 336 aa3.56□□□□□ -1.84
SCFD1-207ENST00000544052 FAM84BQ96KN1 310 aaPredicted RBP3.56□□□□□ -1.84
SCFD1-207ENST00000544052 SFXN2Q96NB2 322 aa3.56□□□□□ -1.84
SCFD1-207ENST00000544052 CPNE1Q99829 537 aa3.56□□□□□ -1.84
SCFD1-207ENST00000544052 IL25Q9H293 177 aa3.56□□□□□ -1.84
SCFD1-207ENST00000544052 COPS7BQ9H9Q2 264 aaPredicted RBP3.56□□□□□ -1.84
SCFD1-207ENST00000544052 TMEM30AQ9NV96 361 aa3.56□□□□□ -1.84
SCFD1-207ENST00000544052 MIOSQ9NXC5 875 aa3.56□□□□□ -1.84
SCFD1-207ENST00000544052 CWC25Q9NXE8 425 aaPredicted RBP3.56□□□□□ -1.84
SCFD1-207ENST00000544052 DPP3Q9NY33 737 aa3.56□□□□□ -1.84
SCFD1-207ENST00000544052 SIX4Q9UIU6 781 aa3.56□□□□□ -1.84
SCFD1-207ENST00000544052 DOT1LQ8TEK3 1739 aa3.56□□□□□ -1.84
SCFD1-207ENST00000544052 KIF20BQ96Q89 1820 aa3.55□□□□□ -1.84
SCFD1-207ENST00000544052 CENPJQ9HC77 1338 aaPredicted RBP3.55□□□□□ -1.84
SCFD1-207ENST00000544052 A0A0U1RQK1 487 aa3.55□□□□□ -1.84
SCFD1-207ENST00000544052 ZNF320A2RRD8 509 aa3.55□□□□□ -1.84
SCFD1-207ENST00000544052 ZNF587BE7ETH6 402 aa3.55□□□□□ -1.84
SCFD1-207ENST00000544052 CCDC188H7C350 402 aa3.55□□□□□ -1.84
SCFD1-207ENST00000544052 WDR1O75083 606 aa3.55□□□□□ -1.84
SCFD1-207ENST00000544052 CAMTA2O94983 1202 aa3.55□□□□□ -1.84
SCFD1-207ENST00000544052 GLUD1P00367 558 aa3.55□□□□□ -1.84
SCFD1-207ENST00000544052 SUPT20HL2P0C7V6 817 aa3.55□□□□□ -1.84
SCFD1-207ENST00000544052 ACP2P11117 423 aa3.55□□□□□ -1.84
SCFD1-207ENST00000544052 HLA-DOBP13765 273 aa3.55□□□□□ -1.84
SCFD1-207ENST00000544052 PTPN3P26045 913 aa3.55□□□□□ -1.84
SCFD1-207ENST00000544052 MTHFRP42898 656 aa3.55□□□□□ -1.84
SCFD1-207ENST00000544052 KCNJ1P48048 391 aa3.55□□□□□ -1.84
SCFD1-207ENST00000544052 GLUD2P49448 558 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms