RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 OR6Q1Q8NGQ2 317 aa8.73□□□□□ -1.01
VPS13D-212ENST00000543766 DNAJA4Q8WW22 397 aaPredicted RBP8.73□□□□□ -1.01
VPS13D-212ENST00000543766 OIT3Q8WWZ8 545 aa8.73□□□□□ -1.01
VPS13D-212ENST00000543766 NEDD4LQ96PU5 975 aa8.73□□□□□ -1.01
VPS13D-212ENST00000543766 MAPKAP1Q9BPZ7 522 aa8.73□□□□□ -1.01
VPS13D-212ENST00000543766 JAM3Q9BX67 310 aa8.73□□□□□ -1.01
VPS13D-212ENST00000543766 C1QTNF3Q9BXJ4 246 aa8.73□□□□□ -1.01
VPS13D-212ENST00000543766 SAR1AQ9NR31 198 aa8.73□□□□□ -1.01
VPS13D-212ENST00000543766 STOML2Q9UJZ1 356 aa8.73□□□□□ -1.01
VPS13D-212ENST00000543766 NDRG2Q9UN36 371 aaKnown RBP8.73□□□□□ -1.01
VPS13D-212ENST00000543766 LOC102724200A0A096LPH7 203 aaPredicted RBP8.72□□□□□ -1.01
VPS13D-212ENST00000543766 CIB4A0PJX0 185 aa8.72□□□□□ -1.01
VPS13D-212ENST00000543766 EFCAB7A8K855 629 aa8.72□□□□□ -1.01
VPS13D-212ENST00000543766 WASH4PA8MWX3 477 aa8.72□□□□□ -1.01
VPS13D-212ENST00000543766 UGDHO60701 494 aa8.72□□□□□ -1.01
VPS13D-212ENST00000543766 VNN1O95497 513 aa8.72□□□□□ -1.01
VPS13D-212ENST00000543766 SYN1P17600 705 aa8.72□□□□□ -1.01
VPS13D-212ENST00000543766 CORO1AP31146 461 aaKnown RBP8.72□□□□□ -1.01
VPS13D-212ENST00000543766 SERPINF1P36955 418 aa8.72□□□□□ -1.01
VPS13D-212ENST00000543766 THPOP40225 353 aa8.72□□□□□ -1.01
VPS13D-212ENST00000543766 SOX10P56693 466 aa8.72□□□□□ -1.01
VPS13D-212ENST00000543766 PTENP60484 403 aa8.72□□□□□ -1.01
VPS13D-212ENST00000543766 ZNF460Q14592 562 aa8.72□□□□□ -1.01
VPS13D-212ENST00000543766 FAM122BQ7Z309 247 aa8.72□□□□□ -1.01
VPS13D-212ENST00000543766 ZC3HC1Q86WB0 502 aaKnown RBP8.72□□□□□ -1.01
VPS13D-212ENST00000543766 CIR1Q86X95 450 aaPredicted RBP8.72□□□□□ -1.01
VPS13D-212ENST00000543766 THEM5Q8N1Q8 247 aa8.72□□□□□ -1.01
VPS13D-212ENST00000543766 SLC15A4Q8N697 577 aa8.72□□□□□ -1.01
VPS13D-212ENST00000543766 C10orf82Q8WW14 230 aa8.72□□□□□ -1.01
VPS13D-212ENST00000543766 KCNE4Q8WWG9 221 aa8.72□□□□□ -1.01
VPS13D-212ENST00000543766 ZHX1-C8orf76Q96EF9 292 aa8.72□□□□□ -1.01
VPS13D-212ENST00000543766 PANX1Q96RD7 426 aa8.72□□□□□ -1.01
VPS13D-212ENST00000543766 SPSB2Q99619 263 aa8.72□□□□□ -1.01
VPS13D-212ENST00000543766 TTLL2Q9BWV7 592 aa8.72□□□□□ -1.01
VPS13D-212ENST00000543766 SUCNR1Q9BXA5 334 aa8.72□□□□□ -1.01
VPS13D-212ENST00000543766 ANO3Q9BYT9 981 aa8.72□□□□□ -1.01
VPS13D-212ENST00000543766 MUC13Q9H3R2 512 aa8.72□□□□□ -1.01
VPS13D-212ENST00000543766 GMPR2Q9P2T1 348 aaKnown RBP8.72□□□□□ -1.01
VPS13D-212ENST00000543766 DNAJB11Q9UBS4 358 aa8.72□□□□□ -1.01
VPS13D-212ENST00000543766 OGDHLQ9ULD0 1010 aa8.72□□□□□ -1.01
VPS13D-212ENST00000543766 PCDHB10Q9UN67 800 aa8.72□□□□□ -1.01
VPS13D-212ENST00000543766 PPIL1Q9Y3C6 166 aa8.72□□□□□ -1.01
VPS13D-212ENST00000543766 MYH3P11055 1940 aa8.72□□□□□ -1.01
VPS13D-212ENST00000543766 TMEM238C9JI98 176 aa8.72□□□□□ -1.01
VPS13D-212ENST00000543766 TRIM24O15164 1050 aa8.72□□□□□ -1.01
VPS13D-212ENST00000543766 NOL4O94818 638 aa8.72□□□□□ -1.01
VPS13D-212ENST00000543766 SBK2P0C263 348 aa8.72□□□□□ -1.01
VPS13D-212ENST00000543766 HSD3B1P14060 373 aa8.72□□□□□ -1.01
VPS13D-212ENST00000543766 DSG3P32926 999 aa8.72□□□□□ -1.01
VPS13D-212ENST00000543766 EPHX2P34913 555 aa8.72□□□□□ -1.01
VPS13D-212ENST00000543766 CCR6P51684 374 aa8.72□□□□□ -1.01
VPS13D-212ENST00000543766 BMXP51813 675 aa8.72□□□□□ -1.01
VPS13D-212ENST00000543766 HK3P52790 923 aa8.72□□□□□ -1.01
VPS13D-212ENST00000543766 AP5B1Q2VPB7 878 aa8.72□□□□□ -1.01
VPS13D-212ENST00000543766 RWDD4Q6NW29 188 aaKnown RBP8.72□□□□□ -1.01
VPS13D-212ENST00000543766 SHISA2Q6UWI4 295 aa8.72□□□□□ -1.01
VPS13D-212ENST00000543766 TOM1L2Q6ZVM7 507 aa8.72□□□□□ -1.01
VPS13D-212ENST00000543766 PYROXD2Q8N2H3 581 aa8.72□□□□□ -1.01
VPS13D-212ENST00000543766 C4orf32Q8N8J7 132 aa8.72□□□□□ -1.01
VPS13D-212ENST00000543766 MCUQ8NE86 351 aa8.72□□□□□ -1.01
VPS13D-212ENST00000543766 OR52M1Q8NGK5 317 aa8.72□□□□□ -1.01
VPS13D-212ENST00000543766 CD300LFQ8TDQ1 290 aa8.72□□□□□ -1.01
VPS13D-212ENST00000543766 GCDHQ92947 438 aaPredicted RBP8.72□□□□□ -1.01
VPS13D-212ENST00000543766 OTUB1Q96FW1 271 aaPredicted RBP8.72□□□□□ -1.01
VPS13D-212ENST00000543766 UCK2Q9BZX2 261 aa8.72□□□□□ -1.01
VPS13D-212ENST00000543766 ALG2Q9H553 416 aa8.72□□□□□ -1.01
VPS13D-212ENST00000543766 MYEF2Q9P2K5 600 aaKnown RBP8.72□□□□□ -1.01
VPS13D-212ENST00000543766 COPG2Q9UBF2 871 aa8.72□□□□□ -1.01
VPS13D-212ENST00000543766 FEM1BQ9UK73 627 aa8.72□□□□□ -1.01
VPS13D-212ENST00000543766 TEX13DA0A0J9YY54 714 aaPredicted RBP8.72□□□□□ -1.01
VPS13D-212ENST00000543766 A0A1B0GW15 77 aa8.72□□□□□ -1.01
VPS13D-212ENST00000543766 ARVCFO00192 962 aa8.72□□□□□ -1.01
VPS13D-212ENST00000543766 MSI1O43347 362 aaKnown RBP8.72□□□□□ -1.01
VPS13D-212ENST00000543766 KLF4O43474 513 aa8.72□□□□□ -1.01
VPS13D-212ENST00000543766 SUPT20HL2P0C7V6 817 aa8.72□□□□□ -1.01
VPS13D-212ENST00000543766 STAG3L2P0CL84 134 aa8.72□□□□□ -1.01
VPS13D-212ENST00000543766 PEPDP12955 493 aa8.72□□□□□ -1.01
VPS13D-212ENST00000543766 CREB1P16220 341 aa8.72□□□□□ -1.01
VPS13D-212ENST00000543766 CDH2P19022 906 aaPredicted RBP8.72□□□□□ -1.01
VPS13D-212ENST00000543766 ZNF143P52747 638 aaPredicted RBP8.72□□□□□ -1.01
VPS13D-212ENST00000543766 MTMR2Q13614 643 aa8.72□□□□□ -1.01
VPS13D-212ENST00000543766 SLC18A3Q16572 532 aa8.72□□□□□ -1.01
VPS13D-212ENST00000543766 EIF2S3LQ2VIR3 472 aaKnown RBP8.72□□□□□ -1.01
VPS13D-212ENST00000543766 ANKRD26P1Q6NSI1 321 aa8.72□□□□□ -1.01
VPS13D-212ENST00000543766 UGT3A1Q6NUS8 523 aa8.72□□□□□ -1.01
VPS13D-212ENST00000543766 SLC7A14Q8TBB6 771 aa8.72□□□□□ -1.01
VPS13D-212ENST00000543766 CHTF18Q8WVB6 975 aa8.72□□□□□ -1.01
VPS13D-212ENST00000543766 ESR2Q92731 530 aa8.72□□□□□ -1.01
VPS13D-212ENST00000543766 KCNK17Q96T54 332 aa8.72□□□□□ -1.01
VPS13D-212ENST00000543766 CELF4Q9BZC1 486 aaKnown RBP8.72□□□□□ -1.01
VPS13D-212ENST00000543766 SLA2Q9H6Q3 261 aa8.72□□□□□ -1.01
VPS13D-212ENST00000543766 LANCL2Q9NS86 450 aa8.72□□□□□ -1.01
VPS13D-212ENST00000543766 TRPC5Q9UL62 973 aaPredicted RBP8.72□□□□□ -1.01
VPS13D-212ENST00000543766 CDK14O94921 469 aa8.71□□□□□ -1.01
VPS13D-212ENST00000543766 DHRS4L1P0CG22 281 aa8.71□□□□□ -1.01
VPS13D-212ENST00000543766 CYP11B1P15538 503 aa8.71□□□□□ -1.01
VPS13D-212ENST00000543766 LBPP18428 481 aa8.71□□□□□ -1.01
VPS13D-212ENST00000543766 YAP1P46937 504 aaKnown RBP8.71□□□□□ -1.01
VPS13D-212ENST00000543766 MECP2P51608 486 aaKnown RBP8.71□□□□□ -1.01
VPS13D-212ENST00000543766 RBP5P82980 135 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms