RNA–Protein interactions for RNA: ENST00000543637.1

NUP43-206, Transcript of nucleoporin 43, humanhuman

TSL 5

Gene NUP43, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-206ENST00000543637 VPS50Q96JG6 964 aa6.92□□□□□ -1.3
NUP43-206ENST00000543637 PBKQ96KB5 322 aa6.92□□□□□ -1.3
NUP43-206ENST00000543637 PPM1MQ96MI6 270 aa6.92□□□□□ -1.3
NUP43-206ENST00000543637 ZNF778Q96MU6 729 aa6.92□□□□□ -1.3
NUP43-206ENST00000543637 OR2A14Q96R47 310 aa6.92□□□□□ -1.3
NUP43-206ENST00000543637 TCF12Q99081 682 aa6.92□□□□□ -1.3
NUP43-206ENST00000543637 NAP1L3Q99457 506 aaPredicted RBP6.92□□□□□ -1.3
NUP43-206ENST00000543637 PITPNM3Q9BZ71 974 aa6.92□□□□□ -1.3
NUP43-206ENST00000543637 ING2Q9H160 280 aa6.92□□□□□ -1.3
NUP43-206ENST00000543637 SLC2A6Q9UGQ3 507 aa6.92□□□□□ -1.3
NUP43-206ENST00000543637 TCFL5Q9UL49 500 aa6.92□□□□□ -1.3
NUP43-206ENST00000543637 SRPK3Q9UPE1 567 aa6.92□□□□□ -1.3
NUP43-206ENST00000543637 PLCL2Q9UPR0 1127 aa6.92□□□□□ -1.3
NUP43-206ENST00000543637 ICKQ9UPZ9 632 aa6.92□□□□□ -1.3
NUP43-206ENST00000543637 TP53TG5Q9Y2B4 290 aa6.92□□□□□ -1.3
NUP43-206ENST00000543637 VPS9D1Q9Y2B5 631 aa6.92□□□□□ -1.3
NUP43-206ENST00000543637 PCDHGB7Q9Y5F8 929 aa6.92□□□□□ -1.3
NUP43-206ENST00000543637 FREM2Q5SZK8 3169 aa6.92□□□□□ -1.3
NUP43-206ENST00000543637 TTLL8A6PVC2 850 aa6.91□□□□□ -1.3
NUP43-206ENST00000543637 BHMG1C9JSJ3 638 aaPredicted RBP6.91□□□□□ -1.3
NUP43-206ENST00000543637 H3BMM5 538 aa6.91□□□□□ -1.3
NUP43-206ENST00000543637 ZNF185O15231 689 aa6.91□□□□□ -1.3
NUP43-206ENST00000543637 DPM1O60762 260 aa6.91□□□□□ -1.3
NUP43-206ENST00000543637 VPS4BO75351 444 aa6.91□□□□□ -1.3
NUP43-206ENST00000543637 GPC4O75487 556 aa6.91□□□□□ -1.3
NUP43-206ENST00000543637 TMEM63AO94886 807 aa6.91□□□□□ -1.3
NUP43-206ENST00000543637 VAPBO95292 243 aa6.91□□□□□ -1.3
NUP43-206ENST00000543637 FKBP9O95302 570 aa6.91□□□□□ -1.3
NUP43-206ENST00000543637 S1PR4O95977 384 aa6.91□□□□□ -1.3
NUP43-206ENST00000543637 KRT14P02533 472 aa6.91□□□□□ -1.3
NUP43-206ENST00000543637 TPSB2P20231 275 aa6.91□□□□□ -1.3
NUP43-206ENST00000543637 CHRM3P20309 590 aa6.91□□□□□ -1.3
NUP43-206ENST00000543637 CD9P21926 228 aa6.91□□□□□ -1.3
NUP43-206ENST00000543637 MGAT1P26572 445 aa6.91□□□□□ -1.3
NUP43-206ENST00000543637 AOAHP28039 575 aa6.91□□□□□ -1.3
NUP43-206ENST00000543637 FMO4P31512 558 aa6.91□□□□□ -1.3
NUP43-206ENST00000543637 CXCR5P32302 372 aa6.91□□□□□ -1.3
NUP43-206ENST00000543637 CCNFP41002 786 aa6.91□□□□□ -1.3
NUP43-206ENST00000543637 FOLR3P41439 243 aa6.91□□□□□ -1.3
NUP43-206ENST00000543637 KCNJ1P48048 391 aa6.91□□□□□ -1.3
NUP43-206ENST00000543637 RAB28P51157 221 aa6.91□□□□□ -1.3
NUP43-206ENST00000543637 TERF1P54274 439 aa6.91□□□□□ -1.3
NUP43-206ENST00000543637 EIF3BP55884 814 aaKnown RBP6.91□□□□□ -1.3
NUP43-206ENST00000543637 THOC5Q13769 683 aaKnown RBP6.91□□□□□ -1.3
NUP43-206ENST00000543637 TPSAB1Q15661 275 aa6.91□□□□□ -1.3
NUP43-206ENST00000543637 FAM214AQ32MH5 1076 aa6.91□□□□□ -1.3
NUP43-206ENST00000543637 ZNF658BQ4V348 819 aaPredicted RBP6.91□□□□□ -1.3
NUP43-206ENST00000543637 TCTE1Q5JU00 501 aa6.91□□□□□ -1.3
NUP43-206ENST00000543637 RNF187Q5TA31 235 aaPredicted RBP6.91□□□□□ -1.3
NUP43-206ENST00000543637 PRAMEF17Q5VTA0 474 aa6.91□□□□□ -1.3
NUP43-206ENST00000543637 RHBDD2Q6NTF9 364 aa6.91□□□□□ -1.3
NUP43-206ENST00000543637 CASC4Q6P4E1 433 aa6.91□□□□□ -1.3
NUP43-206ENST00000543637 ZNF517Q6ZMY9 492 aaPredicted RBP6.91□□□□□ -1.3
NUP43-206ENST00000543637 TMEM135Q86UB9 458 aa6.91□□□□□ -1.3
NUP43-206ENST00000543637 DCUN1D3Q8IWE4 304 aa6.91□□□□□ -1.3
NUP43-206ENST00000543637 KRT222Q8N1A0 295 aa6.91□□□□□ -1.3
NUP43-206ENST00000543637 MPP5Q8N3R9 675 aa6.91□□□□□ -1.3
NUP43-206ENST00000543637 C2orf73Q8N5S3 287 aaPredicted RBP6.91□□□□□ -1.3
NUP43-206ENST00000543637 TTC29Q8NA56 475 aaPredicted RBP6.91□□□□□ -1.3
NUP43-206ENST00000543637 SLC38A9Q8NBW4 561 aa6.91□□□□□ -1.3
NUP43-206ENST00000543637 PROKR1Q8TCW9 393 aa6.91□□□□□ -1.3
NUP43-206ENST00000543637 MAGOHBQ96A72 148 aaKnown RBP6.91□□□□□ -1.3
NUP43-206ENST00000543637 ZUFSPQ96AP4 578 aa6.91□□□□□ -1.3
NUP43-206ENST00000543637 FER1L6-AS2Q96M78 137 aa6.91□□□□□ -1.3
NUP43-206ENST00000543637 CHRNA10Q9GZZ6 450 aa6.91□□□□□ -1.3
NUP43-206ENST00000543637 SPRTNQ9H040 489 aaPredicted RBP6.91□□□□□ -1.3
NUP43-206ENST00000543637 CCDC68Q9H2F9 335 aa6.91□□□□□ -1.3
NUP43-206ENST00000543637 MRM3Q9HC36 420 aaKnown RBP6.91□□□□□ -1.3
NUP43-206ENST00000543637 PCMTD2Q9NV79 361 aa6.91□□□□□ -1.3
NUP43-206ENST00000543637 IL1RAPL1Q9NZN1 696 aa6.91□□□□□ -1.3
NUP43-206ENST00000543637 IFT80Q9P2H3 777 aaPredicted RBP6.91□□□□□ -1.3
NUP43-206ENST00000543637 TTC7AQ9ULT0 858 aaPredicted RBP6.91□□□□□ -1.3
NUP43-206ENST00000543637 PLAGL1Q9UM63 463 aa6.91□□□□□ -1.3
NUP43-206ENST00000543637 VPS4AQ9UN37 437 aa6.91□□□□□ -1.3
NUP43-206ENST00000543637 PPP2R2CQ9Y2T4 447 aa6.91□□□□□ -1.3
NUP43-206ENST00000543637 ZNF451Q9Y4E5 1061 aa6.91□□□□□ -1.3
NUP43-206ENST00000543637 CTAGE9A4FU28 777 aa6.9□□□□□ -1.3
NUP43-206ENST00000543637 SDR42E2A6NKP2 422 aa6.9□□□□□ -1.3
NUP43-206ENST00000543637 A6NL46 340 aa6.9□□□□□ -1.3
NUP43-206ENST00000543637 ZNF839A8K0R7 811 aa6.9□□□□□ -1.3
NUP43-206ENST00000543637 IQCF5A8MTL0 148 aa6.9□□□□□ -1.3
NUP43-206ENST00000543637 TARM1B6A8C7 271 aa6.9□□□□□ -1.3
NUP43-206ENST00000543637 RASGRF2O14827 1237 aa6.9□□□□□ -1.3
NUP43-206ENST00000543637 ZSCAN12O43309 604 aa6.9□□□□□ -1.3
NUP43-206ENST00000543637 SLCO2B1O94956 709 aa6.9□□□□□ -1.3
NUP43-206ENST00000543637 RPS3P23396 243 aaKnown RBP eCLIP6.9□□□□□ -1.3
NUP43-206ENST00000543637 VARSP26640 1264 aaKnown RBP6.9□□□□□ -1.3
NUP43-206ENST00000543637 NMBRP28336 390 aa6.9□□□□□ -1.3
NUP43-206ENST00000543637 CMPK1P30085 196 aa6.9□□□□□ -1.3
NUP43-206ENST00000543637 OTX2P32243 289 aa6.9□□□□□ -1.3
NUP43-206ENST00000543637 RORAP35398 523 aa6.9□□□□□ -1.3
NUP43-206ENST00000543637 PTGIRP43119 386 aa6.9□□□□□ -1.3
NUP43-206ENST00000543637 CRADDP78560 199 aa6.9□□□□□ -1.3
NUP43-206ENST00000543637 GPS1Q13098 491 aa6.9□□□□□ -1.3
NUP43-206ENST00000543637 SEMA3AQ14563 771 aa6.9□□□□□ -1.3
NUP43-206ENST00000543637 NAA25Q14CX7 972 aa6.9□□□□□ -1.3
NUP43-206ENST00000543637 TRIP13Q15645 432 aaPredicted RBP6.9□□□□□ -1.3
NUP43-206ENST00000543637 PTCHD3Q3KNS1 767 aa6.9□□□□□ -1.3
NUP43-206ENST00000543637 C1orf189Q5VU69 101 aa6.9□□□□□ -1.3
NUP43-206ENST00000543637 IRAK1BP1Q5VVH5 260 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms