RNA–Protein interactions for RNA: ENST00000541819.6

GABRB3-204, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 5,934 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-204ENST00000541819 DRG2P55039 364 aaKnown RBP10.55□□□□□ -0.72
GABRB3-204ENST00000541819 CDKL4Q5MAI5 379 aa10.55□□□□□ -0.72
GABRB3-204ENST00000541819 EGFLAMQ63HQ2 1017 aa10.55□□□□□ -0.72
GABRB3-204ENST00000541819 LPCAT4Q643R3 524 aa10.55□□□□□ -0.72
GABRB3-204ENST00000541819 CLEC6AQ6EIG7 209 aa10.55□□□□□ -0.72
GABRB3-204ENST00000541819 LCLAT1Q6UWP7 414 aa10.55□□□□□ -0.72
GABRB3-204ENST00000541819 CYP2U1Q7Z449 544 aa10.55□□□□□ -0.72
GABRB3-204ENST00000541819 CPNE9Q8IYJ1 553 aa10.55□□□□□ -0.72
GABRB3-204ENST00000541819 DNAJB8Q8NHS0 232 aa10.55□□□□□ -0.72
GABRB3-204ENST00000541819 JOSD2Q8TAC2 188 aa10.55□□□□□ -0.72
GABRB3-204ENST00000541819 ROPN1LQ96C74 230 aa10.55□□□□□ -0.72
GABRB3-204ENST00000541819 MFSD3Q96ES6 412 aa10.55□□□□□ -0.72
GABRB3-204ENST00000541819 ADAD1Q96M93 576 aaKnown RBP10.55□□□□□ -0.72
GABRB3-204ENST00000541819 DHX33Q9H6R0 707 aaKnown RBP10.55□□□□□ -0.72
GABRB3-204ENST00000541819 PCDHB16Q9NRJ7 776 aa10.55□□□□□ -0.72
GABRB3-204ENST00000541819 HPF1Q9NWY4 346 aa10.55□□□□□ -0.72
GABRB3-204ENST00000541819 C19orf25Q9UFG5 118 aaPredicted RBP10.55□□□□□ -0.72
GABRB3-204ENST00000541819 IL36AQ9UHA7 158 aa10.55□□□□□ -0.72
GABRB3-204ENST00000541819 RPL36Q9Y3U8 105 aaKnown RBP10.55□□□□□ -0.72
GABRB3-204ENST00000541819 A0A1W2PQ45 241 aaPredicted RBP10.55□□□□□ -0.72
GABRB3-204ENST00000541819 A0A1W2PQY0 241 aa10.55□□□□□ -0.72
GABRB3-204ENST00000541819 AP2A1O95782 977 aa10.55□□□□□ -0.72
GABRB3-204ENST00000541819 RHBDL3P58872 404 aa10.55□□□□□ -0.72
GABRB3-204ENST00000541819 EFR3AQ14156 821 aa10.55□□□□□ -0.72
GABRB3-204ENST00000541819 CNTD1Q8N815 330 aa10.55□□□□□ -0.72
GABRB3-204ENST00000541819 SNIP1Q8TAD8 396 aaKnown RBP10.55□□□□□ -0.72
GABRB3-204ENST00000541819 AP1S3Q96PC3 154 aa10.55□□□□□ -0.72
GABRB3-204ENST00000541819 ZNF350Q9GZX5 532 aa10.55□□□□□ -0.72
GABRB3-204ENST00000541819 OR2AG1Q9H205 316 aa10.55□□□□□ -0.72
GABRB3-204ENST00000541819 WDR26Q9H7D7 661 aa10.55□□□□□ -0.72
GABRB3-204ENST00000541819 ANKRA2Q9H9E1 313 aa10.55□□□□□ -0.72
GABRB3-204ENST00000541819 TIMMDC1Q9NPL8 285 aa10.55□□□□□ -0.72
GABRB3-204ENST00000541819 C1orf109Q9NX04 203 aa10.55□□□□□ -0.72
GABRB3-204ENST00000541819 CDH22Q9UJ99 828 aa10.55□□□□□ -0.72
GABRB3-204ENST00000541819 PLEKHA6Q9Y2H5 1048 aa10.55□□□□□ -0.72
GABRB3-204ENST00000541819 SLC38A8A6NNN8 435 aa10.55□□□□□ -0.72
GABRB3-204ENST00000541819 KLK3P07288 261 aaPredicted RBP10.55□□□□□ -0.72
GABRB3-204ENST00000541819 PRDX6P30041 224 aa10.55□□□□□ -0.72
GABRB3-204ENST00000541819 PTGER3P43115 390 aa10.55□□□□□ -0.72
GABRB3-204ENST00000541819 GLP1RP43220 463 aa10.55□□□□□ -0.72
GABRB3-204ENST00000541819 S100A10P60903 97 aa10.55□□□□□ -0.72
GABRB3-204ENST00000541819 CDK10Q15131 360 aa10.55□□□□□ -0.72
GABRB3-204ENST00000541819 IFNL1Q8IU54 200 aa10.55□□□□□ -0.72
GABRB3-204ENST00000541819 OXR1Q8N573 874 aa10.55□□□□□ -0.72
GABRB3-204ENST00000541819 ARL14EPQ8N8R7 260 aaPredicted RBP10.55□□□□□ -0.72
GABRB3-204ENST00000541819 TMEM125Q96AQ2 219 aa10.55□□□□□ -0.72
GABRB3-204ENST00000541819 PURBQ96QR8 312 aaKnown RBP10.55□□□□□ -0.72
GABRB3-204ENST00000541819 TBX5Q99593 518 aa10.55□□□□□ -0.72
GABRB3-204ENST00000541819 ABCD2Q9UBJ2 740 aa10.55□□□□□ -0.72
GABRB3-204ENST00000541819 R3HDM2Q9Y2K5 976 aaKnown RBP10.55□□□□□ -0.72
GABRB3-204ENST00000541819 SMIM28A0A1B0GU29 152 aa10.54□□□□□ -0.72
GABRB3-204ENST00000541819 M0R129 80 aa10.54□□□□□ -0.72
GABRB3-204ENST00000541819 MATN3O15232 486 aa10.54□□□□□ -0.72
GABRB3-204ENST00000541819 PCDHGA12O60330 932 aa10.54□□□□□ -0.72
GABRB3-204ENST00000541819 EDF1O60869 148 aaKnown RBP10.54□□□□□ -0.72
GABRB3-204ENST00000541819 ESR1P03372 595 aa10.54□□□□□ -0.72
GABRB3-204ENST00000541819 DNAJA1P31689 397 aaKnown RBP10.54□□□□□ -0.72
GABRB3-204ENST00000541819 SLC1A2P43004 574 aa10.54□□□□□ -0.72
GABRB3-204ENST00000541819 PER3P56645 1201 aa10.54□□□□□ -0.72
GABRB3-204ENST00000541819 DCDC1P59894 354 aa10.54□□□□□ -0.72
GABRB3-204ENST00000541819 MPP1Q00013 466 aa10.54□□□□□ -0.72
GABRB3-204ENST00000541819 FSTL1Q12841 308 aa10.54□□□□□ -0.72
GABRB3-204ENST00000541819 NUDT13Q86X67 352 aa10.54□□□□□ -0.72
GABRB3-204ENST00000541819 MREGQ8N565 214 aa10.54□□□□□ -0.72
GABRB3-204ENST00000541819 C15orf40Q8WUR7 153 aa10.54□□□□□ -0.72
GABRB3-204ENST00000541819 HMGB4Q8WW32 186 aa10.54□□□□□ -0.72
GABRB3-204ENST00000541819 SLC44A1Q8WWI5 657 aa10.54□□□□□ -0.72
GABRB3-204ENST00000541819 FCGR1BQ92637 280 aa10.54□□□□□ -0.72
GABRB3-204ENST00000541819 KLK6Q92876 244 aa10.54□□□□□ -0.72
GABRB3-204ENST00000541819 ZNF285Q96NJ3 590 aa10.54□□□□□ -0.72
GABRB3-204ENST00000541819 NUSAP1Q9BXS6 441 aaKnown RBP10.54□□□□□ -0.72
GABRB3-204ENST00000541819 GOLGA2P5Q9HBQ8 144 aa10.54□□□□□ -0.72
GABRB3-204ENST00000541819 TUBA8Q9NY65 449 aaPredicted RBP10.54□□□□□ -0.72
GABRB3-204ENST00000541819 FAM198AQ9UFP1 575 aa10.54□□□□□ -0.72
GABRB3-204ENST00000541819 PADI3Q9ULW8 664 aa10.54□□□□□ -0.72
GABRB3-204ENST00000541819 OR4F21O95013 312 aa10.54□□□□□ -0.72
GABRB3-204ENST00000541819 TIE1P35590 1138 aa10.54□□□□□ -0.72
GABRB3-204ENST00000541819 PBX3P40426 434 aa10.54□□□□□ -0.72
GABRB3-204ENST00000541819 AP2S1P53680 142 aaPredicted RBP10.54□□□□□ -0.72
GABRB3-204ENST00000541819 CSTF1Q05048 431 aaKnown RBP10.54□□□□□ -0.72
GABRB3-204ENST00000541819 SCARB2Q14108 478 aa10.54□□□□□ -0.72
GABRB3-204ENST00000541819 ZDHHC21Q8IVQ6 265 aa10.54□□□□□ -0.72
GABRB3-204ENST00000541819 POF1BQ8WVV4 589 aa10.54□□□□□ -0.72
GABRB3-204ENST00000541819 LPGAT1Q92604 370 aa10.54□□□□□ -0.72
GABRB3-204ENST00000541819 TMCO6Q96DC7 493 aa10.54□□□□□ -0.72
GABRB3-204ENST00000541819 ZNF514Q96K75 400 aaPredicted RBP10.54□□□□□ -0.72
GABRB3-204ENST00000541819 PWWP2AQ96N64 755 aa10.54□□□□□ -0.72
GABRB3-204ENST00000541819 NODALQ96S42 347 aa10.54□□□□□ -0.72
GABRB3-204ENST00000541819 ASPNQ9BXN1 380 aa10.54□□□□□ -0.72
GABRB3-204ENST00000541819 ZNF700Q9H0M5 742 aa10.54□□□□□ -0.72
GABRB3-204ENST00000541819 SEC61A2Q9H9S3 476 aa10.54□□□□□ -0.72
GABRB3-204ENST00000541819 SNTG1Q9NSN8 517 aa10.54□□□□□ -0.72
GABRB3-204ENST00000541819 CYTH4Q9UIA0 394 aa10.54□□□□□ -0.72
GABRB3-204ENST00000541819 PCDHGA10Q9Y5H3 936 aa10.54□□□□□ -0.72
GABRB3-204ENST00000541819 ZNF670-ZNF695F2Z2N8 137 aa10.54□□□□□ -0.72
GABRB3-204ENST00000541819 ZNF16P17020 682 aaPredicted RBP10.54□□□□□ -0.72
GABRB3-204ENST00000541819 GNAZP19086 355 aa10.54□□□□□ -0.72
GABRB3-204ENST00000541819 DRD4P21917 467 aa10.54□□□□□ -0.72
GABRB3-204ENST00000541819 ACTR1BP42025 376 aa10.54□□□□□ -0.72
GABRB3-204ENST00000541819 MARCKSL1P49006 195 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms