RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 COL27A1Q8IZC6 1860 aaPredicted RBP18.2■□□□□ 0.5
VPS33A-205ENST00000541169 KRT37O76014 449 aa18.2■□□□□ 0.5
VPS33A-205ENST00000541169 HOXB3P14651 431 aaPredicted RBP18.2■□□□□ 0.5
VPS33A-205ENST00000541169 LSSP48449 732 aa18.2■□□□□ 0.5
VPS33A-205ENST00000541169 ATP6V0D1P61421 351 aa18.2■□□□□ 0.5
VPS33A-205ENST00000541169 VSNL1P62760 191 aa18.2■□□□□ 0.5
VPS33A-205ENST00000541169 CFHR1Q03591 330 aa18.2■□□□□ 0.5
VPS33A-205ENST00000541169 SLC29A2Q14542 456 aa18.2■□□□□ 0.5
VPS33A-205ENST00000541169 RTP5Q14D33 572 aa18.2■□□□□ 0.5
VPS33A-205ENST00000541169 ERCC6LQ2NKX8 1250 aa18.2■□□□□ 0.5
VPS33A-205ENST00000541169 UBE2R2Q712K3 238 aaPredicted RBP18.2■□□□□ 0.5
VPS33A-205ENST00000541169 RAB11FIP2Q7L804 512 aa18.2■□□□□ 0.5
VPS33A-205ENST00000541169 MTBPQ96DY7 904 aa18.2■□□□□ 0.5
VPS33A-205ENST00000541169 CCDC74BQ96LY2 380 aa18.2■□□□□ 0.5
VPS33A-205ENST00000541169 CCDC138Q96M89 665 aa18.2■□□□□ 0.5
VPS33A-205ENST00000541169 PAFAH2Q99487 392 aa18.2■□□□□ 0.5
VPS33A-205ENST00000541169 DERL2Q9GZP9 239 aa18.2■□□□□ 0.5
VPS33A-205ENST00000541169 SEMA6CQ9H3T2 930 aa18.2■□□□□ 0.5
VPS33A-205ENST00000541169 ZNF768Q9H5H4 540 aaKnown RBP18.2■□□□□ 0.5
VPS33A-205ENST00000541169 POLR1BQ9H9Y6 1135 aa18.2■□□□□ 0.5
VPS33A-205ENST00000541169 C1GALT1Q9NS00 363 aa18.2■□□□□ 0.5
VPS33A-205ENST00000541169 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.2■□□□□ 0.5
VPS33A-205ENST00000541169 KLK13Q9UKR3 277 aa18.2■□□□□ 0.5
VPS33A-205ENST00000541169 POMT2Q9UKY4 750 aa18.2■□□□□ 0.5
VPS33A-205ENST00000541169 NFS1Q9Y697 457 aa18.2■□□□□ 0.5
VPS33A-205ENST00000541169 KNTC1P50748 2209 aa18.2■□□□□ 0.5
VPS33A-205ENST00000541169 A0A087X1B8 175 aa18.19■□□□□ 0.5
VPS33A-205ENST00000541169 MED19A0JLT2 244 aaPredicted RBP18.19■□□□□ 0.5
VPS33A-205ENST00000541169 GSAPA4D1B5 854 aa18.19■□□□□ 0.5
VPS33A-205ENST00000541169 ARHGEF33A8MVX0 844 aa18.19■□□□□ 0.5
VPS33A-205ENST00000541169 RASSF9O75901 435 aa18.19■□□□□ 0.5
VPS33A-205ENST00000541169 PIAS1O75925 651 aa18.19■□□□□ 0.5
VPS33A-205ENST00000541169 TSPAN12O95859 305 aa18.19■□□□□ 0.5
VPS33A-205ENST00000541169 CHRM5P08912 532 aaPredicted RBP18.19■□□□□ 0.5
VPS33A-205ENST00000541169 MYBL2P10244 700 aa18.19■□□□□ 0.5
VPS33A-205ENST00000541169 CAMK2BQ13554 666 aa18.19■□□□□ 0.5
VPS33A-205ENST00000541169 UAP1Q16222 522 aaPredicted RBP18.19■□□□□ 0.5
VPS33A-205ENST00000541169 CYP2A13Q16696 494 aa18.19■□□□□ 0.5
VPS33A-205ENST00000541169 RAPH1Q70E73 1250 aa18.19■□□□□ 0.5
VPS33A-205ENST00000541169 PIWIL4Q7Z3Z4 852 aaKnown RBP18.19■□□□□ 0.5
VPS33A-205ENST00000541169 ADAMTSL2Q86TH1 951 aa18.19■□□□□ 0.5
VPS33A-205ENST00000541169 BPHLQ86WA6 291 aaPredicted RBP18.19■□□□□ 0.5
VPS33A-205ENST00000541169 ADGRF3Q8IZF5 1079 aa18.19■□□□□ 0.5
VPS33A-205ENST00000541169 ATL1Q8WXF7 558 aa18.19■□□□□ 0.5
VPS33A-205ENST00000541169 CAVIN3Q969G5 261 aa18.19■□□□□ 0.5
VPS33A-205ENST00000541169 TGM7Q96PF1 710 aa18.19■□□□□ 0.5
VPS33A-205ENST00000541169 PARD6BQ9BYG5 372 aa18.19■□□□□ 0.5
VPS33A-205ENST00000541169 TLK1Q9UKI8 766 aa18.19■□□□□ 0.5
VPS33A-205ENST00000541169 RAB21Q9UL25 225 aa18.19■□□□□ 0.5
VPS33A-205ENST00000541169 FAM149AA5PLN7 773 aa18.18■□□□□ 0.5
VPS33A-205ENST00000541169 BTN3A1O00481 513 aa18.18■□□□□ 0.5
VPS33A-205ENST00000541169 PLD2O14939 933 aa18.18■□□□□ 0.5
VPS33A-205ENST00000541169 DXOO77932 396 aaKnown RBP18.18■□□□□ 0.5
VPS33A-205ENST00000541169 ERGP11308 486 aa18.18■□□□□ 0.5
VPS33A-205ENST00000541169 POLR2CP19387 275 aaPredicted RBP18.18■□□□□ 0.5
VPS33A-205ENST00000541169 CCND1P24385 295 aa18.18■□□□□ 0.5
VPS33A-205ENST00000541169 SERPINB8P50452 374 aa18.18■□□□□ 0.5
VPS33A-205ENST00000541169 GRB7Q14451 532 aa18.18■□□□□ 0.5
VPS33A-205ENST00000541169 EFTUD2Q15029 972 aaKnown RBP eCLIP18.18■□□□□ 0.5
VPS33A-205ENST00000541169 SLC5A12Q1EHB4 618 aa18.18■□□□□ 0.5
VPS33A-205ENST00000541169 TAF1BQ53T94 588 aaPredicted RBP18.18■□□□□ 0.5
VPS33A-205ENST00000541169 TMEM164Q5U3C3 297 aa18.18■□□□□ 0.5
VPS33A-205ENST00000541169 CACHD1Q5VU97 1274 aa18.18■□□□□ 0.5
VPS33A-205ENST00000541169 TMPRSS9Q7Z410 1059 aa18.18■□□□□ 0.5
VPS33A-205ENST00000541169 B3GNT8Q7Z7M8 397 aa18.18■□□□□ 0.5
VPS33A-205ENST00000541169 TBC1D1Q86TI0 1168 aaPredicted RBP18.18■□□□□ 0.5
VPS33A-205ENST00000541169 CEP97Q8IW35 865 aa18.18■□□□□ 0.5
VPS33A-205ENST00000541169 FBXO39Q8N4B4 442 aa18.18■□□□□ 0.5
VPS33A-205ENST00000541169 UBLCP1Q8WVY7 318 aaPredicted RBP18.18■□□□□ 0.5
VPS33A-205ENST00000541169 KLHL6Q8WZ60 621 aa18.18■□□□□ 0.5
VPS33A-205ENST00000541169 SMPDL3AQ92484 453 aa18.18■□□□□ 0.5
VPS33A-205ENST00000541169 UBXN10Q96LJ8 280 aa18.18■□□□□ 0.5
VPS33A-205ENST00000541169 MENTQ9BUN1 341 aa18.18■□□□□ 0.5
VPS33A-205ENST00000541169 PITPNM3Q9BZ71 974 aa18.18■□□□□ 0.5
VPS33A-205ENST00000541169 CHRNA10Q9GZZ6 450 aa18.18■□□□□ 0.5
VPS33A-205ENST00000541169 INTS7Q9NVH2 962 aaKnown RBP18.18■□□□□ 0.5
VPS33A-205ENST00000541169 ACTR10Q9NZ32 417 aa18.18■□□□□ 0.5
VPS33A-205ENST00000541169 ACOT9Q9Y305 439 aa18.18■□□□□ 0.5
VPS33A-205ENST00000541169 B4E171 279 aa18.17■□□□□ 0.5
VPS33A-205ENST00000541169 POC1B-GALNT4F8VUJ3 575 aa18.17■□□□□ 0.5
VPS33A-205ENST00000541169 BTN3A3O00478 584 aa18.17■□□□□ 0.5
VPS33A-205ENST00000541169 FAM155BO75949 473 aa18.17■□□□□ 0.5
VPS33A-205ENST00000541169 WISP3O95389 354 aaPredicted RBP18.17■□□□□ 0.5
VPS33A-205ENST00000541169 ZBTB11O95625 1053 aaPredicted RBP18.17■□□□□ 0.5
VPS33A-205ENST00000541169 SNRPAP09012 282 aaKnown RBP18.17■□□□□ 0.5
VPS33A-205ENST00000541169 JMJD7P0C870 316 aa18.17■□□□□ 0.5
VPS33A-205ENST00000541169 TPBGLP0DKB5 382 aa18.17■□□□□ 0.5
VPS33A-205ENST00000541169 TYK2P29597 1187 aa18.17■□□□□ 0.5
VPS33A-205ENST00000541169 PRDX3P30048 256 aaKnown RBP18.17■□□□□ 0.5
VPS33A-205ENST00000541169 TSPAN7P41732 249 aa18.17■□□□□ 0.5
VPS33A-205ENST00000541169 ARL4DP49703 201 aa18.17■□□□□ 0.5
VPS33A-205ENST00000541169 RAB15P59190 212 aa18.17■□□□□ 0.5
VPS33A-205ENST00000541169 HSD11B2P80365 405 aa18.17■□□□□ 0.5
VPS33A-205ENST00000541169 CDKL1Q00532 357 aa18.17■□□□□ 0.5
VPS33A-205ENST00000541169 RASA2Q15283 850 aa18.17■□□□□ 0.5
VPS33A-205ENST00000541169 CDKL4Q5MAI5 379 aa18.17■□□□□ 0.5
VPS33A-205ENST00000541169 TMTC4Q5T4D3 741 aa18.17■□□□□ 0.5
VPS33A-205ENST00000541169 MROH9Q5TGP6 573 aa18.17■□□□□ 0.5
VPS33A-205ENST00000541169 ADGRD1Q6QNK2 874 aa18.17■□□□□ 0.5
VPS33A-205ENST00000541169 SPESP1Q6UW49 350 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms