RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 CCNL2Q96S94 520 aaPredicted RBP16.35■□□□□ 0.21
CD9-209ENST00000540891 TSR3Q9UJK0 312 aaKnown RBP16.35■□□□□ 0.21
CD9-209ENST00000540891 PCDHB11Q9Y5F2 797 aa16.35■□□□□ 0.21
CD9-209ENST00000540891 TEX51A0A1B0GUA7 166 aa16.34■□□□□ 0.21
CD9-209ENST00000540891 RAD1O60671 282 aa16.34■□□□□ 0.21
CD9-209ENST00000540891 AHSGP02765 367 aa16.34■□□□□ 0.21
CD9-209ENST00000540891 RPN2P04844 631 aa16.34■□□□□ 0.21
CD9-209ENST00000540891 UGT2B7P16662 529 aa16.34■□□□□ 0.21
CD9-209ENST00000540891 WT1P19544 449 aaPredicted RBP16.34■□□□□ 0.21
CD9-209ENST00000540891 UCNP55089 124 aa16.34■□□□□ 0.21
CD9-209ENST00000540891 CXADRP78310 365 aa16.34■□□□□ 0.21
CD9-209ENST00000540891 CKAP4Q07065 602 aaKnown RBP16.34■□□□□ 0.21
CD9-209ENST00000540891 TUBB3Q13509 450 aa16.34■□□□□ 0.21
CD9-209ENST00000540891 CUL1Q13616 776 aa16.34■□□□□ 0.21
CD9-209ENST00000540891 FRG1Q14331 258 aaKnown RBP16.34■□□□□ 0.21
CD9-209ENST00000540891 KLHL38Q2WGJ6 581 aa16.34■□□□□ 0.21
CD9-209ENST00000540891 SPESP1Q6UW49 350 aa16.34■□□□□ 0.21
CD9-209ENST00000540891 TRIM73Q86UV7 250 aa16.34■□□□□ 0.21
CD9-209ENST00000540891 GSDMBQ8TAX9 411 aa16.34■□□□□ 0.21
CD9-209ENST00000540891 CD200R1Q8TD46 325 aa16.34■□□□□ 0.21
CD9-209ENST00000540891 DENND1AQ8TEH3 1009 aa16.34■□□□□ 0.21
CD9-209ENST00000540891 SKA2Q8WVK7 121 aaPredicted RBP16.34■□□□□ 0.21
CD9-209ENST00000540891 TRAPPC9Q96Q05 1148 aa16.34■□□□□ 0.21
CD9-209ENST00000540891 NDNQ99608 321 aa16.34■□□□□ 0.21
CD9-209ENST00000540891 GPR21Q99679 349 aa16.34■□□□□ 0.21
CD9-209ENST00000540891 KLHL25Q9H0H3 589 aa16.34■□□□□ 0.21
CD9-209ENST00000540891 FGF21Q9NSA1 209 aa16.34■□□□□ 0.21
CD9-209ENST00000540891 KLHL42Q9P2K6 505 aa16.34■□□□□ 0.21
CD9-209ENST00000540891 DHRS7Q9Y394 339 aa16.34■□□□□ 0.21
CD9-209ENST00000540891 COMMD10Q9Y6G5 202 aa16.34■□□□□ 0.21
CD9-209ENST00000540891 NDC80O14777 642 aa16.33■□□□□ 0.2
CD9-209ENST00000540891 RASGRF2O14827 1237 aa16.33■□□□□ 0.2
CD9-209ENST00000540891 SPAG6O75602 509 aa16.33■□□□□ 0.2
CD9-209ENST00000540891 CD9P21926 228 aa16.33■□□□□ 0.2
CD9-209ENST00000540891 ARL4DP49703 201 aa16.33■□□□□ 0.2
CD9-209ENST00000540891 ACY1Q03154 408 aa16.33■□□□□ 0.2
CD9-209ENST00000540891 CALCOCO2Q13137 446 aa16.33■□□□□ 0.2
CD9-209ENST00000540891 GPR19Q15760 415 aa16.33■□□□□ 0.2
CD9-209ENST00000540891 WHAMMP3Q1A5X7 153 aa16.33■□□□□ 0.2
CD9-209ENST00000540891 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.33■□□□□ 0.2
CD9-209ENST00000540891 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.33■□□□□ 0.2
CD9-209ENST00000540891 RBM20Q5T481 1227 aaKnown RBP16.33■□□□□ 0.2
CD9-209ENST00000540891 ZDHHC24Q6UX98 284 aa16.33■□□□□ 0.2
CD9-209ENST00000540891 KIAA0408Q6ZU52 694 aa16.33■□□□□ 0.2
CD9-209ENST00000540891 GALNT7Q86SF2 657 aa16.33■□□□□ 0.2
CD9-209ENST00000540891 PPP1R3BQ86XI6 285 aa16.33■□□□□ 0.2
CD9-209ENST00000540891 SNRNP27Q8WVK2 155 aaKnown RBP16.33■□□□□ 0.2
CD9-209ENST00000540891 ZNF592Q92610 1267 aa16.33■□□□□ 0.2
CD9-209ENST00000540891 ZNF501Q96CX3 271 aaPredicted RBP16.33■□□□□ 0.2
CD9-209ENST00000540891 CCDC68Q9H2F9 335 aa16.33■□□□□ 0.2
CD9-209ENST00000540891 WDR70Q9NW82 654 aa16.33■□□□□ 0.2
CD9-209ENST00000540891 SOHLH2Q9NX45 425 aa16.33■□□□□ 0.2
CD9-209ENST00000540891 RARRES3Q9UL19 164 aa16.33■□□□□ 0.2
CD9-209ENST00000540891 ITPR1Q14643 2758 aa16.33■□□□□ 0.2
CD9-209ENST00000540891 ARHGEF33A8MVX0 844 aa16.32■□□□□ 0.2
CD9-209ENST00000540891 K7ENP7 123 aa16.32■□□□□ 0.2
CD9-209ENST00000540891 KDM1AO60341 852 aa16.32■□□□□ 0.2
CD9-209ENST00000540891 PSIP1O75475 530 aaKnown RBP16.32■□□□□ 0.2
CD9-209ENST00000540891 VAC14Q08AM6 782 aa16.32■□□□□ 0.2
CD9-209ENST00000540891 KIR2DS3Q14952 304 aa16.32■□□□□ 0.2
CD9-209ENST00000540891 ZIC1Q15915 447 aa16.32■□□□□ 0.2
CD9-209ENST00000540891 TTLL9Q3SXZ7 439 aa16.32■□□□□ 0.2
CD9-209ENST00000540891 MANEAQ5SRI9 462 aa16.32■□□□□ 0.2
CD9-209ENST00000540891 ARHGAP40Q5TG30 622 aa16.32■□□□□ 0.2
CD9-209ENST00000540891 PWWP2BQ6NUJ5 590 aa16.32■□□□□ 0.2
CD9-209ENST00000540891 INO80CQ6PI98 192 aaPredicted RBP16.32■□□□□ 0.2
CD9-209ENST00000540891 CYHR1Q6ZMK1 362 aa16.32■□□□□ 0.2
CD9-209ENST00000540891 CCDC81Q6ZN84 652 aa16.32■□□□□ 0.2
CD9-209ENST00000540891 NEK10Q6ZWH5 1172 aa16.32■□□□□ 0.2
CD9-209ENST00000540891 GPR155Q7Z3F1 870 aa16.32■□□□□ 0.2
CD9-209ENST00000540891 RASGRP3Q8IV61 690 aa16.32■□□□□ 0.2
CD9-209ENST00000540891 FAM20CQ8IXL6 584 aa16.32■□□□□ 0.2
CD9-209ENST00000540891 CPNE9Q8IYJ1 553 aa16.32■□□□□ 0.2
CD9-209ENST00000540891 ZBED8Q8IZ13 594 aa16.32■□□□□ 0.2
CD9-209ENST00000540891 CACNA2D3Q8IZS8 1091 aa16.32■□□□□ 0.2
CD9-209ENST00000540891 NLGN4XQ8N0W4 816 aa16.32■□□□□ 0.2
CD9-209ENST00000540891 C2orf73Q8N5S3 287 aaPredicted RBP16.32■□□□□ 0.2
CD9-209ENST00000540891 NLGN4YQ8NFZ3 816 aaPredicted RBP16.32■□□□□ 0.2
CD9-209ENST00000540891 OR2L8Q8NGY9 312 aa16.32■□□□□ 0.2
CD9-209ENST00000540891 INPP5DQ92835 1189 aa16.32■□□□□ 0.2
CD9-209ENST00000540891 RAD51AP1Q96B01 352 aa16.32■□□□□ 0.2
CD9-209ENST00000540891 ULBP3Q9BZM4 244 aa16.32■□□□□ 0.2
CD9-209ENST00000540891 RAB17Q9H0T7 212 aa16.32■□□□□ 0.2
CD9-209ENST00000540891 FAM60AQ9NP50 221 aa16.32■□□□□ 0.2
CD9-209ENST00000540891 PDE7BQ9NP56 450 aa16.32■□□□□ 0.2
CD9-209ENST00000540891 PPANQ9NQ55 473 aaKnown RBP16.32■□□□□ 0.2
CD9-209ENST00000540891 MOCS1Q9NZB8 636 aa16.32■□□□□ 0.2
CD9-209ENST00000540891 UTP11Q9Y3A2 253 aaKnown RBP16.32■□□□□ 0.2
CD9-209ENST00000540891 MRFAP1Q9Y605 127 aa16.32■□□□□ 0.2
CD9-209ENST00000540891 ISM1B1AKI9 464 aa16.31■□□□□ 0.2
CD9-209ENST00000540891 PRICKLE3O43900 615 aaPredicted RBP16.31■□□□□ 0.2
CD9-209ENST00000540891 KIAA0754O94854 1291 aa16.31■□□□□ 0.2
CD9-209ENST00000540891 CCNFP41002 786 aa16.31■□□□□ 0.2
CD9-209ENST00000540891 ATP1A2P50993 1020 aa16.31■□□□□ 0.2
CD9-209ENST00000540891 CDKN2DP55273 166 aa16.31■□□□□ 0.2
CD9-209ENST00000540891 TUBB4BP68371 445 aa16.31■□□□□ 0.2
CD9-209ENST00000540891 SLC7A5Q01650 507 aa16.31■□□□□ 0.2
CD9-209ENST00000540891 MGAT5Q09328 741 aa16.31■□□□□ 0.2
CD9-209ENST00000540891 TUBB2AQ13885 445 aa16.31■□□□□ 0.2
CD9-209ENST00000540891 MAP7Q14244 749 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms