RNA–Protein interactions for RNA: ENST00000540562.1

INO80E-203, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 3,064 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-203ENST00000540562 APIPQ96GX9 242 aa13.8□□□□□ -0.2
INO80E-203ENST00000540562 NUSAP1Q9BXS6 441 aaKnown RBP13.8□□□□□ -0.2
INO80E-203ENST00000540562 ACPTQ9BZG2 426 aa13.8□□□□□ -0.2
INO80E-203ENST00000540562 ZDHHC6Q9H6R6 413 aa13.8□□□□□ -0.2
INO80E-203ENST00000540562 TMEM161AQ9NX61 479 aa13.8□□□□□ -0.2
INO80E-203ENST00000540562 ABCG2Q9UNQ0 655 aa13.8□□□□□ -0.2
INO80E-203ENST00000540562 GLYATL1P3A0A0U1RQE8 302 aa13.8□□□□□ -0.2
INO80E-203ENST00000540562 A0A1W2PQ45 241 aaPredicted RBP13.8□□□□□ -0.2
INO80E-203ENST00000540562 A0A1W2PQY0 241 aa13.8□□□□□ -0.2
INO80E-203ENST00000540562 H0YJX3 145 aa13.8□□□□□ -0.2
INO80E-203ENST00000540562 PER2O15055 1255 aa13.8□□□□□ -0.2
INO80E-203ENST00000540562 OPN1SWP03999 348 aa13.8□□□□□ -0.2
INO80E-203ENST00000540562 PSMB9P28065 219 aa13.8□□□□□ -0.2
INO80E-203ENST00000540562 CYP2A13Q16696 494 aa13.8□□□□□ -0.2
INO80E-203ENST00000540562 UAP1L1Q3KQV9 507 aa13.8□□□□□ -0.2
INO80E-203ENST00000540562 CACHD1Q5VU97 1274 aa13.8□□□□□ -0.2
INO80E-203ENST00000540562 CLECL1Q8IZS7 167 aa13.8□□□□□ -0.2
INO80E-203ENST00000540562 ZBTB2Q8N680 514 aa13.8□□□□□ -0.2
INO80E-203ENST00000540562 BPIFB1Q8TDL5 484 aa13.8□□□□□ -0.2
INO80E-203ENST00000540562 ELMO1Q92556 727 aa13.8□□□□□ -0.2
INO80E-203ENST00000540562 MED8Q96G25 268 aa13.8□□□□□ -0.2
INO80E-203ENST00000540562 MIR1-1HGQ9H1L0 117 aa13.8□□□□□ -0.2
INO80E-203ENST00000540562 PLGRKTQ9HBL7 147 aa13.8□□□□□ -0.2
INO80E-203ENST00000540562 POPDC3Q9HBV1 291 aa13.8□□□□□ -0.2
INO80E-203ENST00000540562 PAK1IP1Q9NWT1 392 aaPredicted RBP13.8□□□□□ -0.2
INO80E-203ENST00000540562 BAG5Q9UL15 447 aa13.8□□□□□ -0.2
INO80E-203ENST00000540562 NEUROG3Q9Y4Z2 214 aa13.8□□□□□ -0.2
INO80E-203ENST00000540562 ILVBLA1L0T0 632 aa13.79□□□□□ -0.2
INO80E-203ENST00000540562 NRG2O14511 850 aaPredicted RBP13.79□□□□□ -0.2
INO80E-203ENST00000540562 ANKRD28O15084 1053 aa13.79□□□□□ -0.2
INO80E-203ENST00000540562 RGS14O43566 566 aa13.79□□□□□ -0.2
INO80E-203ENST00000540562 UGT2B4P06133 528 aa13.79□□□□□ -0.2
INO80E-203ENST00000540562 ITGALP20701 1170 aa13.79□□□□□ -0.2
INO80E-203ENST00000540562 CD70P32970 193 aa13.79□□□□□ -0.2
INO80E-203ENST00000540562 MASP1P48740 699 aa13.79□□□□□ -0.2
INO80E-203ENST00000540562 RGS4P49798 205 aa13.79□□□□□ -0.2
INO80E-203ENST00000540562 VBP1P61758 197 aa13.79□□□□□ -0.2
INO80E-203ENST00000540562 AQP6Q13520 282 aa13.79□□□□□ -0.2
INO80E-203ENST00000540562 BROXQ5VW32 411 aa13.79□□□□□ -0.2
INO80E-203ENST00000540562 GRAMD4Q6IC98 578 aa13.79□□□□□ -0.2
INO80E-203ENST00000540562 CCSAPQ6IQ19 270 aaPredicted RBP13.79□□□□□ -0.2
INO80E-203ENST00000540562 CRTC3Q6UUV7 619 aa13.79□□□□□ -0.2
INO80E-203ENST00000540562 CEP68Q76N32 757 aa13.79□□□□□ -0.2
INO80E-203ENST00000540562 PTRH1Q86Y79 214 aaKnown RBP13.79□□□□□ -0.2
INO80E-203ENST00000540562 CMTM8Q8IZV2 173 aa13.79□□□□□ -0.2
INO80E-203ENST00000540562 LILRA3Q8N6C8 439 aaPredicted RBP13.79□□□□□ -0.2
INO80E-203ENST00000540562 OR52J3Q8NH60 311 aa13.79□□□□□ -0.2
INO80E-203ENST00000540562 CD99L2Q8TCZ2 262 aa13.79□□□□□ -0.2
INO80E-203ENST00000540562 PLEKHA8Q96JA3 519 aa13.79□□□□□ -0.2
INO80E-203ENST00000540562 FUNDC2Q9BWH2 189 aa13.79□□□□□ -0.2
INO80E-203ENST00000540562 TBC1D23Q9NUY8 699 aa13.79□□□□□ -0.2
INO80E-203ENST00000540562 TRNAU1APQ9NX07 287 aaKnown RBP13.79□□□□□ -0.2
INO80E-203ENST00000540562 NUDT4Q9NZJ9 180 aa13.79□□□□□ -0.2
INO80E-203ENST00000540562 SAP18O00422 153 aaKnown RBP13.79□□□□□ -0.2
INO80E-203ENST00000540562 HTR1AP08908 422 aa13.79□□□□□ -0.2
INO80E-203ENST00000540562 OCM2P0CE71 109 aa13.79□□□□□ -0.2
INO80E-203ENST00000540562 OCMP0CE72 109 aaPredicted RBP13.79□□□□□ -0.2
INO80E-203ENST00000540562 HMGA1P17096 107 aaKnown RBP13.79□□□□□ -0.2
INO80E-203ENST00000540562 ATP13A5Q4VNC0 1218 aa13.79□□□□□ -0.2
INO80E-203ENST00000540562 PRR23BQ6ZRT6 265 aa13.79□□□□□ -0.2
INO80E-203ENST00000540562 RIMKLAQ8IXN7 391 aa13.79□□□□□ -0.2
INO80E-203ENST00000540562 C2orf73Q8N5S3 287 aaPredicted RBP13.79□□□□□ -0.2
INO80E-203ENST00000540562 ZNF548Q8NEK5 533 aaPredicted RBP13.79□□□□□ -0.2
INO80E-203ENST00000540562 RAET1EQ8TD07 263 aa13.79□□□□□ -0.2
INO80E-203ENST00000540562 GLMNQ92990 594 aa13.79□□□□□ -0.2
INO80E-203ENST00000540562 MBOAT4Q96T53 435 aa13.79□□□□□ -0.2
INO80E-203ENST00000540562 FNIP2Q9P278 1114 aa13.79□□□□□ -0.2
INO80E-203ENST00000540562 PDE10AQ9Y233 779 aa13.79□□□□□ -0.2
INO80E-203ENST00000540562 FAM92AA1XBS5 289 aa13.79□□□□□ -0.2
INO80E-203ENST00000540562 CREG1O75629 220 aa13.79□□□□□ -0.2
INO80E-203ENST00000540562 STK16O75716 305 aa13.79□□□□□ -0.2
INO80E-203ENST00000540562 NUDT7P0C024 238 aa13.79□□□□□ -0.2
INO80E-203ENST00000540562 HTR1BP28222 390 aa13.79□□□□□ -0.2
INO80E-203ENST00000540562 S100A3P33764 101 aa13.79□□□□□ -0.2
INO80E-203ENST00000540562 HMGCLP35914 325 aa13.79□□□□□ -0.2
INO80E-203ENST00000540562 ZXDCQ2QGD7 858 aaPredicted RBP13.79□□□□□ -0.2
INO80E-203ENST00000540562 LRRC66Q68CR7 880 aa13.79□□□□□ -0.2
INO80E-203ENST00000540562 XAF1Q6GPH4 301 aa13.79□□□□□ -0.2
INO80E-203ENST00000540562 PROSER1Q86XN7 944 aa13.79□□□□□ -0.2
INO80E-203ENST00000540562 SPARTQ8N0X7 666 aa13.79□□□□□ -0.2
INO80E-203ENST00000540562 PACRGLQ8N7B6 248 aa13.79□□□□□ -0.2
INO80E-203ENST00000540562 SORCS1Q8WY21 1168 aa13.79□□□□□ -0.2
INO80E-203ENST00000540562 RPL3LQ92901 407 aaKnown RBP13.79□□□□□ -0.2
INO80E-203ENST00000540562 ISG20Q96AZ6 181 aaKnown RBP13.79□□□□□ -0.2
INO80E-203ENST00000540562 VN1R3Q9BXE9 311 aa13.79□□□□□ -0.2
INO80E-203ENST00000540562 ERVK-18Q9QC07 812 aa13.79□□□□□ -0.2
INO80E-203ENST00000540562 GAPDHSO14556 408 aaPredicted RBP13.78□□□□□ -0.2
INO80E-203ENST00000540562 ATP6V1G1O75348 118 aa13.78□□□□□ -0.2
INO80E-203ENST00000540562 HOXB8P17481 243 aaPredicted RBP13.78□□□□□ -0.2
INO80E-203ENST00000540562 CRHBPP24387 322 aa13.78□□□□□ -0.2
INO80E-203ENST00000540562 HLCSP50747 726 aa13.78□□□□□ -0.2
INO80E-203ENST00000540562 CYP4F2P78329 520 aa13.78□□□□□ -0.2
INO80E-203ENST00000540562 ABRQ12979 859 aa13.78□□□□□ -0.2
INO80E-203ENST00000540562 DNASE1L3Q13609 305 aa13.78□□□□□ -0.2
INO80E-203ENST00000540562 MRPL58Q14197 206 aaKnown RBP13.78□□□□□ -0.2
INO80E-203ENST00000540562 GPNMBQ14956 572 aa13.78□□□□□ -0.2
INO80E-203ENST00000540562 DPY19L1Q2PZI1 675 aa13.78□□□□□ -0.2
INO80E-203ENST00000540562 PTCHD3Q3KNS1 767 aa13.78□□□□□ -0.2
INO80E-203ENST00000540562 BBS7Q8IWZ6 715 aa13.78□□□□□ -0.2
INO80E-203ENST00000540562 RHBDF1Q96CC6 855 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms