RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 TMC8Q8IU68 726 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 WDTC1Q8N5D0 677 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 OR8K5Q8NH50 307 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 CERS2Q96G23 380 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 ADPGKQ9BRR6 497 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 SPNS1Q9H2V7 528 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 MUC13Q9H3R2 512 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 ALG2Q9H553 416 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 MEAF6Q9HAF1 191 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 INTS7Q9NVH2 962 aaKnown RBP9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 AASSQ9UDR5 926 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 ELF5Q9UKW6 265 aaPredicted RBP9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 USP18Q9UMW8 372 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 TLR6Q9Y2C9 796 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 PCDHA9Q9Y5H5 950 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 HRH3Q9Y5N1 445 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 ACTL7AQ9Y615 435 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 MYO18AQ92614 2054 aaKnown RBP9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 A0A0J9YYE9 177 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 FAM92AA1XBS5 289 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 OR2A25A4D2G3 310 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 UBXN8O00124 270 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 DFNA5O60443 496 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 CYP7B1O75881 506 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 MT-CO1P00395 513 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 S100A6P06703 90 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 TNNI1P19237 187 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 GADD45AP24522 165 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 YWHAQP27348 245 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 CD52P31358 61 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 RYKP34925 604 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 CA5AP35218 305 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 LIPAP38571 399 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 RGS7P49802 495 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 PGGT1BP53609 377 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 PER3P56645 1201 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 ELOAQ14241 798 aaKnown RBP9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 POU4F3Q15319 338 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 PTCHD3Q3KNS1 767 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 UGT3A2Q3SY77 523 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 FBXO47Q5MNV8 452 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 BSPRYQ5W0U4 402 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 ZNF470Q6ECI4 717 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 SCARA5Q6ZMJ2 495 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 SYVN1Q86TM6 617 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 GPALPP1Q8IXQ4 340 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 ABI1Q8IZP0 508 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 ZNF366Q8N895 744 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 WDR48Q8TAF3 677 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 STYXQ8WUJ0 223 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 FBLIM1Q8WUP2 373 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 PTP4A1Q93096 173 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 TMEM125Q96AQ2 219 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 LRRC58Q96CX6 371 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 PAWRQ96IZ0 340 aaKnown RBP9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 RPRD1AQ96P16 312 aaPredicted RBP9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 RNF157Q96PX1 679 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 PEBP4Q96S96 227 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 DCLRE1CQ96SD1 692 aaKnown RBP9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 C12orf57Q99622 126 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 SLC30A2Q9BRI3 323 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 UGT2B28Q9BY64 529 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 MCOLN1Q9GZU1 580 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 TMEM168Q9H0V1 697 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 OR51B5Q9H339 312 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 SAV1Q9H4B6 383 aaPredicted RBP9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 FBRSL1Q9HCM7 1045 aaKnown RBP9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 SLC39A1Q9NY26 324 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 USE1Q9NZ43 259 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 TJP2Q9UDY2 1190 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 ANKRD6Q9Y2G4 727 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 NDUFAF1Q9Y375 327 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 PRELID3BQ9Y3B1 194 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 TPRKBQ9Y3C4 175 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 PTPRJQ12913 1337 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 B4DXG7 233 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 C9JVG2 144 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 ENDOD1O94919 500 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 LSM8O95777 96 aaKnown RBP9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 RPLP2P05387 115 aaKnown RBP9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 CXCL8P10145 99 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 CAPN3P20807 821 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 GPX3P22352 226 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 HLA-DMAP28067 261 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 TRIM23P36406 574 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 MTHFRP42898 656 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 MVKQ03426 396 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 LIPEQ05469 1076 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 KCNC3Q14003 757 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 MBTPS1Q14703 1052 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 TAB1Q15750 504 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 RABL3Q5HYI8 236 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 LAIR1Q6GTX8 287 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 SLC27A1Q6PCB7 646 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 ZNF680Q8NEM1 530 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 REPS1Q96D71 796 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 ITCHQ96J02 903 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 FOPNLQ96NB1 174 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 FRMD6Q96NE9 622 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 PGLYRP2Q96PD5 576 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms