RNA–Protein interactions for RNA: ENST00000540209.5

RAP1B-221, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAP1B, Length 1,264 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-221ENST00000540209 ADARP55265 1226 aaKnown RBP18.72■□□□□ 0.59
RAP1B-221ENST00000540209 EIF3BP55884 814 aaKnown RBP18.72■□□□□ 0.59
RAP1B-221ENST00000540209 KIR2DS3Q14952 304 aa18.72■□□□□ 0.59
RAP1B-221ENST00000540209 ZIC1Q15915 447 aa18.72■□□□□ 0.59
RAP1B-221ENST00000540209 KYNUQ16719 465 aa18.72■□□□□ 0.59
RAP1B-221ENST00000540209 RNF187Q5TA31 235 aaPredicted RBP18.72■□□□□ 0.59
RAP1B-221ENST00000540209 IZUMO3Q5VZ72 239 aa18.72■□□□□ 0.59
RAP1B-221ENST00000540209 DCUN1D3Q8IWE4 304 aa18.72■□□□□ 0.59
RAP1B-221ENST00000540209 DSELQ8IZU8 1212 aa18.72■□□□□ 0.59
RAP1B-221ENST00000540209 OTUD6BQ8N6M0 293 aa18.72■□□□□ 0.59
RAP1B-221ENST00000540209 LINC01555Q8NAE3 123 aa18.72■□□□□ 0.59
RAP1B-221ENST00000540209 TCTN2Q96GX1 697 aa18.72■□□□□ 0.59
RAP1B-221ENST00000540209 SERPINB12Q96P63 405 aa18.72■□□□□ 0.59
RAP1B-221ENST00000540209 TCF12Q99081 682 aa18.72■□□□□ 0.59
RAP1B-221ENST00000540209 TRIM56Q9BRZ2 755 aaKnown RBP18.72■□□□□ 0.59
RAP1B-221ENST00000540209 XAB2Q9HCS7 855 aaKnown RBP18.72■□□□□ 0.59
RAP1B-221ENST00000540209 FAM60AQ9NP50 221 aa18.72■□□□□ 0.59
RAP1B-221ENST00000540209 KCNMB2Q9Y691 235 aa18.72■□□□□ 0.59
RAP1B-221ENST00000540209 A0A0J9YY10 115 aa18.71■□□□□ 0.59
RAP1B-221ENST00000540209 FAM237BA0A1B0GVD1 139 aa18.71■□□□□ 0.59
RAP1B-221ENST00000540209 H3BMH7 237 aa18.71■□□□□ 0.59
RAP1B-221ENST00000540209 MEN1O00255 615 aa18.71■□□□□ 0.59
RAP1B-221ENST00000540209 OGNP20774 298 aaKnown RBP18.71■□□□□ 0.59
RAP1B-221ENST00000540209 CYP2A7P20853 494 aa18.71■□□□□ 0.59
RAP1B-221ENST00000540209 PTPN4P29074 926 aa18.71■□□□□ 0.59
RAP1B-221ENST00000540209 MAGEA3P43357 314 aa18.71■□□□□ 0.59
RAP1B-221ENST00000540209 GABRA4P48169 554 aa18.71■□□□□ 0.59
RAP1B-221ENST00000540209 ITGA1P56199 1179 aa18.71■□□□□ 0.59
RAP1B-221ENST00000540209 SLC5A12Q1EHB4 618 aa18.71■□□□□ 0.59
RAP1B-221ENST00000540209 PLEKHS1Q5SXH7 462 aa18.71■□□□□ 0.59
RAP1B-221ENST00000540209 OTOAQ7RTW8 1153 aa18.71■□□□□ 0.59
RAP1B-221ENST00000540209 SDCCAG8Q86SQ7 713 aaPredicted RBP18.71■□□□□ 0.59
RAP1B-221ENST00000540209 HOOK3Q86VS8 718 aa18.71■□□□□ 0.59
RAP1B-221ENST00000540209 CFAP61Q8NHU2 1237 aa18.71■□□□□ 0.59
RAP1B-221ENST00000540209 MR1Q95460 341 aa18.71■□□□□ 0.59
RAP1B-221ENST00000540209 FAM117AQ9C073 453 aa18.71■□□□□ 0.59
RAP1B-221ENST00000540209 ACTR5Q9H9F9 607 aaPredicted RBP18.71■□□□□ 0.59
RAP1B-221ENST00000540209 PCMTD2Q9NV79 361 aa18.71■□□□□ 0.59
RAP1B-221ENST00000540209 SAMD15Q9P1V8 674 aa18.71■□□□□ 0.59
RAP1B-221ENST00000540209 SERTAD3Q9UJW9 196 aa18.71■□□□□ 0.59
RAP1B-221ENST00000540209 UBR5O95071 2799 aaPredicted RBP18.71■□□□□ 0.59
RAP1B-221ENST00000540209 MYO18BQ8IUG5 2567 aa18.7■□□□□ 0.58
RAP1B-221ENST00000540209 E7EQ34 232 aa18.7■□□□□ 0.58
RAP1B-221ENST00000540209 J3QKU1 62 aa18.7■□□□□ 0.58
RAP1B-221ENST00000540209 SEC16AO15027 2179 aa18.7■□□□□ 0.58
RAP1B-221ENST00000540209 HCRTR1O43613 425 aa18.7■□□□□ 0.58
RAP1B-221ENST00000540209 SLC28A2O43868 658 aa18.7■□□□□ 0.58
RAP1B-221ENST00000540209 KIF5CO60282 957 aa18.7■□□□□ 0.58
RAP1B-221ENST00000540209 ESR1P03372 595 aa18.7■□□□□ 0.58
RAP1B-221ENST00000540209 KLK3P07288 261 aaPredicted RBP18.7■□□□□ 0.58
RAP1B-221ENST00000540209 PAMP19021 973 aa18.7■□□□□ 0.58
RAP1B-221ENST00000540209 CD9P21926 228 aa18.7■□□□□ 0.58
RAP1B-221ENST00000540209 RPS18P62269 152 aaKnown RBP18.7■□□□□ 0.58
RAP1B-221ENST00000540209 RPS15P62841 145 aaKnown RBP18.7■□□□□ 0.58
RAP1B-221ENST00000540209 NFKB2Q00653 900 aa18.7■□□□□ 0.58
RAP1B-221ENST00000540209 GBX1Q14549 363 aa18.7■□□□□ 0.58
RAP1B-221ENST00000540209 LCN10Q6JVE6 187 aa18.7■□□□□ 0.58
RAP1B-221ENST00000540209 CASC4Q6P4E1 433 aa18.7■□□□□ 0.58
RAP1B-221ENST00000540209 TMEM135Q86UB9 458 aa18.7■□□□□ 0.58
RAP1B-221ENST00000540209 CILP2Q8IUL8 1156 aa18.7■□□□□ 0.58
RAP1B-221ENST00000540209 AGGF1Q8N302 714 aaeCLIP18.7■□□□□ 0.584e-7■■■■□ 23.4
RAP1B-221ENST00000540209 NAT8LQ8N9F0 302 aa18.7■□□□□ 0.58
RAP1B-221ENST00000540209 GRK7Q8WTQ7 553 aa18.7■□□□□ 0.58
RAP1B-221ENST00000540209 SEC14L1Q92503 715 aa18.7■□□□□ 0.58
RAP1B-221ENST00000540209 CLIP3Q96DZ5 547 aa18.7■□□□□ 0.58
RAP1B-221ENST00000540209 CHST8Q9H2A9 424 aa18.7■□□□□ 0.58
RAP1B-221ENST00000540209 TRMT1Q9NXH9 659 aaKnown RBP18.7■□□□□ 0.58
RAP1B-221ENST00000540209 POLHQ9Y253 713 aa18.7■□□□□ 0.58
RAP1B-221ENST00000540209 HEMK1Q9Y5R4 338 aaPredicted RBP18.7■□□□□ 0.58
RAP1B-221ENST00000540209 GOLGA6L10A0A0M3HER8 536 aa18.69■□□□□ 0.58
RAP1B-221ENST00000540209 ZCWPW2A0A1B0GU75 182 aa18.69■□□□□ 0.58
RAP1B-221ENST00000540209 MAGEB16A2A368 324 aa18.69■□□□□ 0.58
RAP1B-221ENST00000540209 CDC14CA4D256 554 aa18.69■□□□□ 0.58
RAP1B-221ENST00000540209 SDR42E2A6NKP2 422 aa18.69■□□□□ 0.58
RAP1B-221ENST00000540209 ISM1B1AKI9 464 aa18.69■□□□□ 0.58
RAP1B-221ENST00000540209 GOLGA8MH3BSY2 632 aa18.69■□□□□ 0.58
RAP1B-221ENST00000540209 RASGRF2O14827 1237 aa18.69■□□□□ 0.58
RAP1B-221ENST00000540209 PFDN6O15212 129 aa18.69■□□□□ 0.58
RAP1B-221ENST00000540209 ZNF185O15231 689 aa18.69■□□□□ 0.58
RAP1B-221ENST00000540209 NIPSNAP2O75323 286 aa18.69■□□□□ 0.58
RAP1B-221ENST00000540209 FMO4P31512 558 aa18.69■□□□□ 0.58
RAP1B-221ENST00000540209 DHX34Q14147 1143 aaKnown RBP18.69■□□□□ 0.58
RAP1B-221ENST00000540209 UGT8Q16880 541 aa18.69■□□□□ 0.58
RAP1B-221ENST00000540209 ANKRD20A4Q4UJ75 823 aa18.69■□□□□ 0.58
RAP1B-221ENST00000540209 NEPROQ6NW34 567 aa18.69■□□□□ 0.58
RAP1B-221ENST00000540209 CENPUQ71F23 418 aa18.69■□□□□ 0.58
RAP1B-221ENST00000540209 PRICKLE2Q7Z3G6 844 aa18.69■□□□□ 0.58
RAP1B-221ENST00000540209 SYVN1Q86TM6 617 aa18.69■□□□□ 0.58
RAP1B-221ENST00000540209 SYTL1Q8IYJ3 562 aa18.69■□□□□ 0.58
RAP1B-221ENST00000540209 OR2L8Q8NGY9 312 aa18.69■□□□□ 0.58
RAP1B-221ENST00000540209 GSDMBQ8TAX9 411 aa18.69■□□□□ 0.58
RAP1B-221ENST00000540209 ZNF669Q96BR6 464 aaPredicted RBP18.69■□□□□ 0.58
RAP1B-221ENST00000540209 IL1RAPL1Q9NZN1 696 aa18.69■□□□□ 0.58
RAP1B-221ENST00000540209 CIDEBQ9UHD4 219 aa18.69■□□□□ 0.58
RAP1B-221ENST00000540209 FARSAQ9Y285 508 aaKnown RBP18.69■□□□□ 0.58
RAP1B-221ENST00000540209 NFS1Q9Y697 457 aa18.69■□□□□ 0.58
RAP1B-221ENST00000540209 H3BMM5 538 aa18.68■□□□□ 0.58
RAP1B-221ENST00000540209 ZNF749O43361 778 aa18.68■□□□□ 0.58
RAP1B-221ENST00000540209 SUV39H1O43463 412 aa18.68■□□□□ 0.58
RAP1B-221ENST00000540209 CAPN1P07384 714 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms