RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 GMPR2Q9P2T1 348 aaKnown RBP8.52□□□□□ -1.04
DDB1-217ENST00000540166 LEF1Q9UJU2 399 aaPredicted RBP8.52□□□□□ -1.04
DDB1-217ENST00000540166 STOML2Q9UJZ1 356 aa8.52□□□□□ -1.04
DDB1-217ENST00000540166 MKLN1Q9UL63 735 aa8.52□□□□□ -1.04
DDB1-217ENST00000540166 GFRA3O60609 400 aa8.52□□□□□ -1.05
DDB1-217ENST00000540166 PMPCBO75439 489 aa8.52□□□□□ -1.05
DDB1-217ENST00000540166 OR7A10O76100 309 aa8.52□□□□□ -1.05
DDB1-217ENST00000540166 IRF1P10914 325 aa8.52□□□□□ -1.05
DDB1-217ENST00000540166 PSKH1P11801 424 aa8.52□□□□□ -1.05
DDB1-217ENST00000540166 IL4RP24394 825 aa8.52□□□□□ -1.05
DDB1-217ENST00000540166 UQCRC1P31930 480 aa8.52□□□□□ -1.05
DDB1-217ENST00000540166 POLR2IP36954 125 aaKnown RBP8.52□□□□□ -1.05
DDB1-217ENST00000540166 MAP2K4P45985 399 aa8.52□□□□□ -1.05
DDB1-217ENST00000540166 PGGT1BP53609 377 aa8.52□□□□□ -1.05
DDB1-217ENST00000540166 STARD3Q14849 445 aa8.52□□□□□ -1.05
DDB1-217ENST00000540166 QPRTQ15274 297 aa8.52□□□□□ -1.05
DDB1-217ENST00000540166 TAZQ16635 292 aa8.52□□□□□ -1.05
DDB1-217ENST00000540166 LCN8Q6JVE9 175 aa8.52□□□□□ -1.05
DDB1-217ENST00000540166 GALNT5Q7Z7M9 940 aa8.52□□□□□ -1.05
DDB1-217ENST00000540166 ZDHHC17Q8IUH5 632 aa8.52□□□□□ -1.05
DDB1-217ENST00000540166 EPHX4Q8IUS5 362 aa8.52□□□□□ -1.05
DDB1-217ENST00000540166 ZNF567Q8N184 647 aa8.52□□□□□ -1.05
DDB1-217ENST00000540166 PHF10Q8WUB8 498 aaKnown RBP8.52□□□□□ -1.05
DDB1-217ENST00000540166 CELF6Q96J87 481 aaKnown RBP8.52□□□□□ -1.05
DDB1-217ENST00000540166 SUSD3Q96L08 255 aa8.52□□□□□ -1.05
DDB1-217ENST00000540166 FBRSL1Q9HCM7 1045 aaKnown RBP8.52□□□□□ -1.05
DDB1-217ENST00000540166 SMPD4Q9NXE4 827 aa8.52□□□□□ -1.05
DDB1-217ENST00000540166 YIPF1Q9Y548 306 aa8.52□□□□□ -1.05
DDB1-217ENST00000540166 FAM186AA6NE01 2351 aa8.52□□□□□ -1.05
DDB1-217ENST00000540166 ATG13O75143 517 aa8.52□□□□□ -1.05
DDB1-217ENST00000540166 GSRP00390 522 aa8.52□□□□□ -1.05
DDB1-217ENST00000540166 LAMP2P13473 410 aa8.52□□□□□ -1.05
DDB1-217ENST00000540166 SHMT2P34897 504 aa8.52□□□□□ -1.05
DDB1-217ENST00000540166 CDH13P55290 713 aa8.52□□□□□ -1.05
DDB1-217ENST00000540166 GABARAPL2P60520 117 aa8.52□□□□□ -1.05
DDB1-217ENST00000540166 PPP1R8Q12972 351 aaKnown RBP8.52□□□□□ -1.05
DDB1-217ENST00000540166 KCNAB2Q13303 367 aa8.52□□□□□ -1.05
DDB1-217ENST00000540166 CTBP1Q13363 440 aa8.52□□□□□ -1.05
DDB1-217ENST00000540166 ZNF267Q14586 743 aaPredicted RBP8.52□□□□□ -1.05
DDB1-217ENST00000540166 ZNF460Q14592 562 aa8.52□□□□□ -1.05
DDB1-217ENST00000540166 SLC10A6Q3KNW5 377 aa8.52□□□□□ -1.05
DDB1-217ENST00000540166 DPY19L3Q6ZPD9 716 aa8.52□□□□□ -1.05
DDB1-217ENST00000540166 AHSA2Q719I0 299 aa8.52□□□□□ -1.05
DDB1-217ENST00000540166 SPRED1Q7Z699 444 aa8.52□□□□□ -1.05
DDB1-217ENST00000540166 CPA6Q8N4T0 437 aa8.52□□□□□ -1.05
DDB1-217ENST00000540166 ATG16L2Q8NAA4 619 aa8.52□□□□□ -1.05
DDB1-217ENST00000540166 BIRC7Q96CA5 298 aa8.52□□□□□ -1.05
DDB1-217ENST00000540166 RPL10LQ96L21 214 aaKnown RBP8.52□□□□□ -1.05
DDB1-217ENST00000540166 C14orf119Q9NWQ9 140 aa8.52□□□□□ -1.05
DDB1-217ENST00000540166 DDIT4Q9NX09 232 aa8.52□□□□□ -1.05
DDB1-217ENST00000540166 GDE1Q9NZC3 331 aa8.52□□□□□ -1.05
DDB1-217ENST00000540166 ZMYM5Q9UJ78 669 aa8.52□□□□□ -1.05
DDB1-217ENST00000540166 PCDHGA8Q9Y5G5 932 aa8.52□□□□□ -1.05
DDB1-217ENST00000540166 BACE2Q9Y5Z0 518 aa8.52□□□□□ -1.05
DDB1-217ENST00000540166 MAU2Q9Y6X3 613 aa8.52□□□□□ -1.05
DDB1-217ENST00000540166 LOC100130705A0A1B0GUX0 176 aa8.51□□□□□ -1.05
DDB1-217ENST00000540166 MEN1O00255 615 aa8.51□□□□□ -1.05
DDB1-217ENST00000540166 SLC1A7O00341 560 aa8.51□□□□□ -1.05
DDB1-217ENST00000540166 TULP3O75386 442 aa8.51□□□□□ -1.05
DDB1-217ENST00000540166 ALDH1A2O94788 518 aa8.51□□□□□ -1.05
DDB1-217ENST00000540166 RAP2AP10114 183 aa8.51□□□□□ -1.05
DDB1-217ENST00000540166 CYP3A5P20815 502 aa8.51□□□□□ -1.05
DDB1-217ENST00000540166 GABRB3P28472 473 aa8.51□□□□□ -1.05
DDB1-217ENST00000540166 PKLRP30613 574 aa8.51□□□□□ -1.05
DDB1-217ENST00000540166 NPY2RP49146 381 aa8.51□□□□□ -1.05
DDB1-217ENST00000540166 CD47Q08722 323 aa8.51□□□□□ -1.05
DDB1-217ENST00000540166 GALNT2Q10471 571 aa8.51□□□□□ -1.05
DDB1-217ENST00000540166 ACOX1Q15067 660 aa8.51□□□□□ -1.05
DDB1-217ENST00000540166 FAM214AQ32MH5 1076 aa8.51□□□□□ -1.05
DDB1-217ENST00000540166 KLHL12Q53G59 568 aa8.51□□□□□ -1.05
DDB1-217ENST00000540166 RABL3Q5HYI8 236 aa8.51□□□□□ -1.05
DDB1-217ENST00000540166 DNAJB7Q7Z6W7 309 aaPredicted RBP8.51□□□□□ -1.05
DDB1-217ENST00000540166 CLYBLQ8N0X4 340 aa8.51□□□□□ -1.05
DDB1-217ENST00000540166 METTL4Q8N3J2 472 aa8.51□□□□□ -1.05
DDB1-217ENST00000540166 CELF2-AS1Q8N7Q2 184 aa8.51□□□□□ -1.05
DDB1-217ENST00000540166 KDM1BQ8NB78 822 aa8.51□□□□□ -1.05
DDB1-217ENST00000540166 ANGPTL6Q8NI99 470 aa8.51□□□□□ -1.05
DDB1-217ENST00000540166 CCDC120Q96HB5 630 aa8.51□□□□□ -1.05
DDB1-217ENST00000540166 PAAF1Q9BRP4 392 aa8.51□□□□□ -1.05
DDB1-217ENST00000540166 RASSF1Q9NS23 344 aa8.51□□□□□ -1.05
DDB1-217ENST00000540166 IRAK3Q9Y616 596 aa8.51□□□□□ -1.05
DDB1-217ENST00000540166 GPR37L1O60883 481 aa8.51□□□□□ -1.05
DDB1-217ENST00000540166 IPO13O94829 963 aaKnown RBP8.51□□□□□ -1.05
DDB1-217ENST00000540166 SRFP11831 508 aa8.51□□□□□ -1.05
DDB1-217ENST00000540166 ERCC2P18074 760 aa8.51□□□□□ -1.05
DDB1-217ENST00000540166 TYMPP19971 482 aa8.51□□□□□ -1.05
DDB1-217ENST00000540166 ETV3P41162 512 aa8.51□□□□□ -1.05
DDB1-217ENST00000540166 EIF2DP41214 584 aaKnown RBP8.51□□□□□ -1.05
DDB1-217ENST00000540166 CLCN4P51793 760 aa8.51□□□□□ -1.05
DDB1-217ENST00000540166 EIF2B5Q13144 721 aaKnown RBP8.51□□□□□ -1.05
DDB1-217ENST00000540166 PON2Q15165 354 aa8.51□□□□□ -1.05
DDB1-217ENST00000540166 DPYSL2Q16555 572 aa8.51□□□□□ -1.05
DDB1-217ENST00000540166 STEAP4Q687X5 459 aa8.51□□□□□ -1.05
DDB1-217ENST00000540166 NCBP2-AS2Q69YL0 99 aa8.51□□□□□ -1.05
DDB1-217ENST00000540166 ASTLQ6HA08 431 aaPredicted RBP8.51□□□□□ -1.05
DDB1-217ENST00000540166 TRNP1Q6NT89 227 aa8.51□□□□□ -1.05
DDB1-217ENST00000540166 HACD2Q6Y1H2 254 aa8.51□□□□□ -1.05
DDB1-217ENST00000540166 NOXA1Q86UR1 476 aa8.51□□□□□ -1.05
DDB1-217ENST00000540166 STX19Q8N4C7 294 aa8.51□□□□□ -1.05
DDB1-217ENST00000540166 LSMEM1Q8N8F7 131 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms