RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 PDE10AQ9Y233 779 aa11.25□□□□□ -0.61
C11orf54-214ENST00000540113 TRAV19A0A0A6YYK7 116 aa11.25□□□□□ -0.61
C11orf54-214ENST00000540113 SH3BGRLO75368 114 aa11.25□□□□□ -0.61
C11orf54-214ENST00000540113 PRKD3O94806 890 aa11.25□□□□□ -0.61
C11orf54-214ENST00000540113 LRG1P02750 347 aa11.25□□□□□ -0.61
C11orf54-214ENST00000540113 C8AP07357 584 aa11.25□□□□□ -0.61
C11orf54-214ENST00000540113 MYCLP1P12525 358 aaPredicted RBP11.25□□□□□ -0.61
C11orf54-214ENST00000540113 BCKDHAP12694 445 aa11.25□□□□□ -0.61
C11orf54-214ENST00000540113 ITPKAP23677 461 aa11.25□□□□□ -0.61
C11orf54-214ENST00000540113 SERPINA4P29622 427 aa11.25□□□□□ -0.61
C11orf54-214ENST00000540113 HLA-FP30511 346 aa11.25□□□□□ -0.61
C11orf54-214ENST00000540113 TUBA4AP68366 448 aa11.25□□□□□ -0.61
C11orf54-214ENST00000540113 ADARB1P78563 741 aaKnown RBP11.25□□□□□ -0.61
C11orf54-214ENST00000540113 CHRNB3Q05901 458 aa11.25□□□□□ -0.61
C11orf54-214ENST00000540113 FXNQ16595 210 aa11.25□□□□□ -0.61
C11orf54-214ENST00000540113 PGS1Q32NB8 556 aa11.25□□□□□ -0.61
C11orf54-214ENST00000540113 SPATS1Q496A3 300 aa11.25□□□□□ -0.61
C11orf54-214ENST00000540113 GPR107Q5VW38 600 aa11.25□□□□□ -0.61
C11orf54-214ENST00000540113 MACC1Q6ZN28 852 aa11.25□□□□□ -0.61
C11orf54-214ENST00000540113 UBE2R2Q712K3 238 aaPredicted RBP11.25□□□□□ -0.61
C11orf54-214ENST00000540113 CHST14Q8NCH0 376 aa11.25□□□□□ -0.61
C11orf54-214ENST00000540113 ZNF548Q8NEK5 533 aaPredicted RBP11.25□□□□□ -0.61
C11orf54-214ENST00000540113 FOXJ1Q92949 421 aa11.25□□□□□ -0.61
C11orf54-214ENST00000540113 NCLNQ969V3 563 aa11.25□□□□□ -0.61
C11orf54-214ENST00000540113 FAM162AQ96A26 154 aa11.25□□□□□ -0.61
C11orf54-214ENST00000540113 C12orf43Q96C57 262 aaKnown RBP11.25□□□□□ -0.61
C11orf54-214ENST00000540113 ISOC1Q96CN7 298 aa11.25□□□□□ -0.61
C11orf54-214ENST00000540113 HTATIP2Q9BUP3 242 aa11.25□□□□□ -0.61
C11orf54-214ENST00000540113 ATG10Q9H0Y0 220 aa11.25□□□□□ -0.61
C11orf54-214ENST00000540113 C11orf49Q9H6J7 331 aa11.25□□□□□ -0.61
C11orf54-214ENST00000540113 POLR1BQ9H9Y6 1135 aa11.25□□□□□ -0.61
C11orf54-214ENST00000540113 RYDENQ9NUL5 291 aaKnown RBP11.25□□□□□ -0.61
C11orf54-214ENST00000540113 EXD2Q9NVH0 621 aa11.25□□□□□ -0.61
C11orf54-214ENST00000540113 HCFC1R1Q9NWW0 138 aa11.25□□□□□ -0.61
C11orf54-214ENST00000540113 TMPRSS11EQ9UL52 423 aa11.25□□□□□ -0.61
C11orf54-214ENST00000540113 SSUH2Q9Y2M2 353 aa11.25□□□□□ -0.61
C11orf54-214ENST00000540113 PCDHB14Q9Y5E9 798 aa11.25□□□□□ -0.61
C11orf54-214ENST00000540113 U3KQV3 271 aa11.25□□□□□ -0.61
C11orf54-214ENST00000540113 NUP214P35658 2090 aaPredicted RBP11.25□□□□□ -0.61
C11orf54-214ENST00000540113 SLC28A1O00337 649 aa11.24□□□□□ -0.61
C11orf54-214ENST00000540113 NPPAP01160 153 aa11.24□□□□□ -0.61
C11orf54-214ENST00000540113 ALBP02768 609 aa11.24□□□□□ -0.61
C11orf54-214ENST00000540113 RAP2AP10114 183 aa11.24□□□□□ -0.61
C11orf54-214ENST00000540113 AKT1P31749 480 aa11.24□□□□□ -0.61
C11orf54-214ENST00000540113 MLLT3P42568 568 aaPredicted RBP11.24□□□□□ -0.61
C11orf54-214ENST00000540113 CDKN2CP42773 168 aa11.24□□□□□ -0.61
C11orf54-214ENST00000540113 MAPK8P45983 427 aa11.24□□□□□ -0.61
C11orf54-214ENST00000540113 ARSFP54793 590 aa11.24□□□□□ -0.61
C11orf54-214ENST00000540113 POM121L1PQ3SYA9 428 aa11.24□□□□□ -0.61
C11orf54-214ENST00000540113 FAM98BQ52LJ0 330 aaKnown RBP11.24□□□□□ -0.61
C11orf54-214ENST00000540113 USP39Q53GS9 565 aaKnown RBP11.24□□□□□ -0.61
C11orf54-214ENST00000540113 CACHD1Q5VU97 1274 aa11.24□□□□□ -0.61
C11orf54-214ENST00000540113 GRAMD4Q6IC98 578 aa11.24□□□□□ -0.61
C11orf54-214ENST00000540113 TMEM26Q6ZUK4 368 aa11.24□□□□□ -0.61
C11orf54-214ENST00000540113 KCTD8Q6ZWB6 473 aa11.24□□□□□ -0.61
C11orf54-214ENST00000540113 PATL1Q86TB9 770 aaKnown RBP11.24□□□□□ -0.61
C11orf54-214ENST00000540113 TNIP2Q8NFZ5 429 aa11.24□□□□□ -0.61
C11orf54-214ENST00000540113 CORO1BQ9BR76 489 aa11.24□□□□□ -0.61
C11orf54-214ENST00000540113 BBS2Q9BXC9 721 aa11.24□□□□□ -0.61
C11orf54-214ENST00000540113 GPRC5BQ9NZH0 403 aa11.24□□□□□ -0.61
C11orf54-214ENST00000540113 ZNF639Q9UID6 485 aa11.24□□□□□ -0.61
C11orf54-214ENST00000540113 INVSQ9Y283 1065 aa11.24□□□□□ -0.61
C11orf54-214ENST00000540113 ZNF510Q9Y2H8 683 aa11.24□□□□□ -0.61
C11orf54-214ENST00000540113 CXCR6O00574 342 aa11.24□□□□□ -0.61
C11orf54-214ENST00000540113 CLGNO14967 610 aa11.24□□□□□ -0.61
C11orf54-214ENST00000540113 PRAMEF4O60810 478 aa11.24□□□□□ -0.61
C11orf54-214ENST00000540113 GMNNO75496 209 aa11.24□□□□□ -0.61
C11orf54-214ENST00000540113 WDR47O94967 919 aa11.24□□□□□ -0.61
C11orf54-214ENST00000540113 ATE1O95260 518 aa11.24□□□□□ -0.61
C11orf54-214ENST00000540113 CLDN9O95484 217 aa11.24□□□□□ -0.61
C11orf54-214ENST00000540113 CST1P01037 141 aa11.24□□□□□ -0.61
C11orf54-214ENST00000540113 EBLN1P0CF75 366 aa11.24□□□□□ -0.61
C11orf54-214ENST00000540113 IL7RP16871 459 aa11.24□□□□□ -0.61
C11orf54-214ENST00000540113 EFNA1P20827 205 aaPredicted RBP11.24□□□□□ -0.61
C11orf54-214ENST00000540113 EEF1B2P24534 225 aaKnown RBP11.24□□□□□ -0.61
C11orf54-214ENST00000540113 PPM1AP35813 382 aa11.24□□□□□ -0.61
C11orf54-214ENST00000540113 PIGFQ07326 219 aa11.24□□□□□ -0.61
C11orf54-214ENST00000540113 SLC14A1Q13336 389 aa11.24□□□□□ -0.61
C11orf54-214ENST00000540113 RAB39AQ14964 217 aa11.24□□□□□ -0.61
C11orf54-214ENST00000540113 TMEM259Q4ZIN3 620 aa11.24□□□□□ -0.61
C11orf54-214ENST00000540113 PRAMEF9Q5VWM5 478 aa11.24□□□□□ -0.61
C11orf54-214ENST00000540113 C22orf39Q6P5X5 142 aa11.24□□□□□ -0.61
C11orf54-214ENST00000540113 DPY19L3Q6ZPD9 716 aa11.24□□□□□ -0.61
C11orf54-214ENST00000540113 Q6ZVU0 165 aa11.24□□□□□ -0.61
C11orf54-214ENST00000540113 ARHGAP22Q7Z5H3 698 aa11.24□□□□□ -0.61
C11orf54-214ENST00000540113 TMEM179BQ7Z7N9 219 aa11.24□□□□□ -0.61
C11orf54-214ENST00000540113 GALNT10Q86SR1 603 aa11.24□□□□□ -0.61
C11orf54-214ENST00000540113 GPR65Q8IYL9 337 aa11.24□□□□□ -0.61
C11orf54-214ENST00000540113 NETO1Q8TDF5 533 aa11.24□□□□□ -0.61
C11orf54-214ENST00000540113 SELENOMQ8WWX9 145 aa11.24□□□□□ -0.61
C11orf54-214ENST00000540113 SCAMP4Q969E2 229 aa11.24□□□□□ -0.61
C11orf54-214ENST00000540113 ECHDC3Q96DC8 303 aa11.24□□□□□ -0.61
C11orf54-214ENST00000540113 SLC47A1Q96FL8 570 aa11.24□□□□□ -0.61
C11orf54-214ENST00000540113 COPS8Q99627 209 aa11.24□□□□□ -0.61
C11orf54-214ENST00000540113 C19orf43Q9BQ61 176 aa11.24□□□□□ -0.61
C11orf54-214ENST00000540113 NTMT1Q9BV86 223 aa11.24□□□□□ -0.61
C11orf54-214ENST00000540113 EBPLQ9BY08 206 aa11.24□□□□□ -0.61
C11orf54-214ENST00000540113 MTG2Q9H4K7 406 aa11.24□□□□□ -0.61
C11orf54-214ENST00000540113 CLMPQ9H6B4 373 aa11.24□□□□□ -0.61
C11orf54-214ENST00000540113 ETAA1Q9NY74 926 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms