RNA–Protein interactions for RNA: ENST00000539975.5

SNHG1-212, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 955 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-212ENST00000539975 CATP04040 527 aaKnown RBP6.31□□□□□ -1.4
SNHG1-212ENST00000539975 RPLP0P05388 317 aaKnown RBP6.31□□□□□ -1.4
SNHG1-212ENST00000539975 MTHFD1P11586 935 aaKnown RBP6.31□□□□□ -1.4
SNHG1-212ENST00000539975 STMN1P16949 149 aa6.31□□□□□ -1.4
SNHG1-212ENST00000539975 CNTFP26441 200 aa6.31□□□□□ -1.4
SNHG1-212ENST00000539975 ARNTP27540 789 aa6.31□□□□□ -1.4
SNHG1-212ENST00000539975 AOAHP28039 575 aa6.31□□□□□ -1.4
SNHG1-212ENST00000539975 TNFRSF8P28908 595 aa6.31□□□□□ -1.4
SNHG1-212ENST00000539975 CCR7P32248 378 aa6.31□□□□□ -1.4
SNHG1-212ENST00000539975 GP5P40197 560 aa6.31□□□□□ -1.4
SNHG1-212ENST00000539975 PREPP48147 710 aa6.31□□□□□ -1.4
SNHG1-212ENST00000539975 SERPINB9P50453 376 aa6.31□□□□□ -1.4
SNHG1-212ENST00000539975 MAZP56270 477 aaKnown RBP6.31□□□□□ -1.4
SNHG1-212ENST00000539975 MPP1Q00013 466 aa6.31□□□□□ -1.4
SNHG1-212ENST00000539975 POU4F1Q01851 419 aa6.31□□□□□ -1.4
SNHG1-212ENST00000539975 IFFO1Q0D2I5 559 aa6.31□□□□□ -1.4
SNHG1-212ENST00000539975 ABRQ12979 859 aa6.31□□□□□ -1.4
SNHG1-212ENST00000539975 USP10Q14694 798 aaKnown RBP6.31□□□□□ -1.4
SNHG1-212ENST00000539975 RPE65Q16518 533 aa6.31□□□□□ -1.4
SNHG1-212ENST00000539975 CLPPQ16740 277 aaPredicted RBP6.31□□□□□ -1.4
SNHG1-212ENST00000539975 SPRED3Q2MJR0 410 aa6.31□□□□□ -1.4
SNHG1-212ENST00000539975 KBTBD12Q3ZCT8 623 aa6.31□□□□□ -1.4
SNHG1-212ENST00000539975 AMZ1Q400G9 498 aa6.31□□□□□ -1.4
SNHG1-212ENST00000539975 KCTD16Q68DU8 428 aa6.31□□□□□ -1.4
SNHG1-212ENST00000539975 ANKRD34AQ69YU3 496 aa6.31□□□□□ -1.4
SNHG1-212ENST00000539975 GUSBP11Q6P575 273 aa6.31□□□□□ -1.4
SNHG1-212ENST00000539975 TRMT10BQ6PF06 316 aaKnown RBP6.31□□□□□ -1.4
SNHG1-212ENST00000539975 CNSTQ6PJW8 725 aa6.31□□□□□ -1.4
SNHG1-212ENST00000539975 UNC5DQ6UXZ4 953 aa6.31□□□□□ -1.4
SNHG1-212ENST00000539975 CCNI2Q6ZMN8 369 aaPredicted RBP6.31□□□□□ -1.4
SNHG1-212ENST00000539975 RBM44Q6ZP01 1051 aaKnown RBP6.31□□□□□ -1.4
SNHG1-212ENST00000539975 C11orf96Q7Z7L8 435 aa6.31□□□□□ -1.4
SNHG1-212ENST00000539975 PDZD3Q86UT5 571 aa6.31□□□□□ -1.4
SNHG1-212ENST00000539975 OOSP2Q86WS3 158 aa6.31□□□□□ -1.4
SNHG1-212ENST00000539975 PLXDC1Q8IUK5 500 aa6.31□□□□□ -1.4
SNHG1-212ENST00000539975 TBC1D21Q8IYX1 336 aa6.31□□□□□ -1.4
SNHG1-212ENST00000539975 UNC5BQ8IZJ1 945 aa6.31□□□□□ -1.4
SNHG1-212ENST00000539975 KRT222Q8N1A0 295 aa6.31□□□□□ -1.4
SNHG1-212ENST00000539975 AGGF1Q8N302 714 aaeCLIP6.31□□□□□ -1.4
SNHG1-212ENST00000539975 NKAPQ8N5F7 415 aaKnown RBP6.31□□□□□ -1.4
SNHG1-212ENST00000539975 ACVR1CQ8NER5 493 aa6.31□□□□□ -1.4
SNHG1-212ENST00000539975 NAT14Q8WUY8 206 aa6.31□□□□□ -1.4
SNHG1-212ENST00000539975 LCN9Q8WX39 176 aa6.31□□□□□ -1.4
SNHG1-212ENST00000539975 NCSTNQ92542 709 aa6.31□□□□□ -1.4
SNHG1-212ENST00000539975 RAD51AP1Q96B01 352 aa6.31□□□□□ -1.4
SNHG1-212ENST00000539975 FAM136AQ96C01 138 aa6.31□□□□□ -1.4
SNHG1-212ENST00000539975 GRAMD1AQ96CP6 724 aa6.31□□□□□ -1.4
SNHG1-212ENST00000539975 MRRFQ96E11 262 aaKnown RBP6.31□□□□□ -1.4
SNHG1-212ENST00000539975 ZDHHC12Q96GR4 267 aa6.31□□□□□ -1.4
SNHG1-212ENST00000539975 ATXN7L3BQ96GX2 97 aa6.31□□□□□ -1.4
SNHG1-212ENST00000539975 TMEM74Q96NL1 305 aa6.31□□□□□ -1.4
SNHG1-212ENST00000539975 BIRC8Q96P09 236 aa6.31□□□□□ -1.4
SNHG1-212ENST00000539975 DEPDC7Q96QD5 511 aa6.31□□□□□ -1.4
SNHG1-212ENST00000539975 AARSD1Q9BTE6 412 aaKnown RBP6.31□□□□□ -1.4
SNHG1-212ENST00000539975 RAB11FIP5Q9BXF6 653 aa6.31□□□□□ -1.4
SNHG1-212ENST00000539975 CDC42EP4Q9H3Q1 356 aaKnown RBP6.31□□□□□ -1.4
SNHG1-212ENST00000539975 SRMSQ9H3Y6 488 aa6.31□□□□□ -1.4
SNHG1-212ENST00000539975 RHOJQ9H4E5 214 aa6.31□□□□□ -1.4
SNHG1-212ENST00000539975 UCK1Q9HA47 277 aa6.31□□□□□ -1.4
SNHG1-212ENST00000539975 TLK1Q9UKI8 766 aa6.31□□□□□ -1.4
SNHG1-212ENST00000539975 TDRKHQ9Y2W6 561 aaKnown RBP6.31□□□□□ -1.4
SNHG1-212ENST00000539975 DHRS7Q9Y394 339 aa6.31□□□□□ -1.4
SNHG1-212ENST00000539975 CFAP20Q9Y6A4 193 aaKnown RBP6.31□□□□□ -1.4
SNHG1-212ENST00000539975 PRSS21Q9Y6M0 314 aa6.31□□□□□ -1.4
SNHG1-212ENST00000539975 RNF215Q9Y6U7 377 aa6.31□□□□□ -1.4
SNHG1-212ENST00000539975 MUC6Q6W4X9 2439 aa6.31□□□□□ -1.4
SNHG1-212ENST00000539975 ZFHX2Q9C0A1 2572 aaPredicted RBP6.3□□□□□ -1.4
SNHG1-212ENST00000539975 TRPM6Q9BX84 2022 aa6.3□□□□□ -1.4
SNHG1-212ENST00000539975 EML5Q05BV3 1969 aa6.3□□□□□ -1.4
SNHG1-212ENST00000539975 FAM95CA0A1B0GW59 222 aa6.3□□□□□ -1.4
SNHG1-212ENST00000539975 SLC5A10A0PJK1 596 aa6.3□□□□□ -1.4
SNHG1-212ENST00000539975 FAM159BA6NKW6 160 aa6.3□□□□□ -1.4
SNHG1-212ENST00000539975 POC1B-GALNT4F8VUJ3 575 aa6.3□□□□□ -1.4
SNHG1-212ENST00000539975 MATN2O00339 956 aa6.3□□□□□ -1.4
SNHG1-212ENST00000539975 GIPC1O14908 333 aa6.3□□□□□ -1.4
SNHG1-212ENST00000539975 OPA1O60313 960 aa6.3□□□□□ -1.4
SNHG1-212ENST00000539975 NIPSNAP2O75323 286 aa6.3□□□□□ -1.4
SNHG1-212ENST00000539975 RASSF9O75901 435 aa6.3□□□□□ -1.4
SNHG1-212ENST00000539975 KRT37O76014 449 aa6.3□□□□□ -1.4
SNHG1-212ENST00000539975 UBXN7O94888 489 aa6.3□□□□□ -1.4
SNHG1-212ENST00000539975 SLCO2B1O94956 709 aa6.3□□□□□ -1.4
SNHG1-212ENST00000539975 SYF2O95926 243 aaKnown RBP6.3□□□□□ -1.4
SNHG1-212ENST00000539975 B3GALT4O96024 378 aa6.3□□□□□ -1.4
SNHG1-212ENST00000539975 GIMD1P0DJR0 217 aa6.3□□□□□ -1.4
SNHG1-212ENST00000539975 MYF5P13349 255 aa6.3□□□□□ -1.4
SNHG1-212ENST00000539975 CYP2A7P20853 494 aa6.3□□□□□ -1.4
SNHG1-212ENST00000539975 CRABP2P29373 138 aa6.3□□□□□ -1.4
SNHG1-212ENST00000539975 PDHA2P29803 388 aa6.3□□□□□ -1.4
SNHG1-212ENST00000539975 ATP5DP30049 168 aa6.3□□□□□ -1.4
SNHG1-212ENST00000539975 SHMT2P34897 504 aa6.3□□□□□ -1.4
SNHG1-212ENST00000539975 CA5AP35218 305 aa6.3□□□□□ -1.4
SNHG1-212ENST00000539975 HSD17B2P37059 387 aa6.3□□□□□ -1.4
SNHG1-212ENST00000539975 ACADVLP49748 655 aa6.3□□□□□ -1.4
SNHG1-212ENST00000539975 OR1D5P58170 312 aa6.3□□□□□ -1.4
SNHG1-212ENST00000539975 PRKG2Q13237 762 aa6.3□□□□□ -1.4
SNHG1-212ENST00000539975 CLCA4Q14CN2 919 aa6.3□□□□□ -1.4
SNHG1-212ENST00000539975 ERCC6LQ2NKX8 1250 aa6.3□□□□□ -1.4
SNHG1-212ENST00000539975 TAF1BQ53T94 588 aaPredicted RBP6.3□□□□□ -1.4
SNHG1-212ENST00000539975 HECTD2Q5U5R9 776 aa6.3□□□□□ -1.4
SNHG1-212ENST00000539975 CAPRIN2Q6IMN6 1127 aaKnown RBP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms