RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 ATAD3CQ5T2N8 411 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 SH3PXD2AQ5TCZ1 1133 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 SDR16C5Q8N3Y7 309 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 DTX3Q8N9I9 347 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 SNX33Q8WV41 574 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 TMEM159Q96B96 161 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 ASB9Q96DX5 294 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 APOLD1Q96LR9 279 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 TBX22Q9Y458 520 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 CLTCQ00610 1675 aaKnown RBP5.57□□□□□ -1.52
CSMD1-215ENST00000537824 TPST2O60704 377 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 PROS1P07225 676 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 GNAZP19086 355 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 GALK2Q01415 458 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 GCNT1Q02742 428 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 DYRK1AQ13627 763 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 IKBKEQ14164 716 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 DCP1BQ8IZD4 617 aaKnown RBP5.57□□□□□ -1.52
CSMD1-215ENST00000537824 OR10T2Q8NGX3 314 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 SNRNP25Q9BV90 132 aaKnown RBP5.57□□□□□ -1.52
CSMD1-215ENST00000537824 OR51V1Q9H2C8 321 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 RPF2Q9H7B2 306 aaKnown RBP5.57□□□□□ -1.52
CSMD1-215ENST00000537824 TIMM22Q9Y584 194 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 TMEM150BA6NC51 233 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 TCAF2A6NFQ2 919 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 LRRN3E7EW58 273 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 TPSB2P20231 275 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 PNPLA4P41247 253 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 MECP2P51608 486 aaKnown RBP5.57□□□□□ -1.52
CSMD1-215ENST00000537824 TLE2Q04725 743 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 SP140Q13342 867 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 TPSAB1Q15661 275 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 TSPAN33Q86UF1 283 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 TMEM151AQ8N4L1 468 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 BSNDQ8WZ55 320 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 LRRN3Q9H3W5 708 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 GSKIPQ9P0R6 139 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 PCDHGB6Q9Y5F9 930 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 BICRAQ9NZM4 1560 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 E5RJQ4 531 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 AP2A1O95782 977 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 ELK4P28324 431 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 CLVS2Q5SYC1 327 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 ALG1LQ6GMV1 187 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 TCEAL6Q6IPX3 200 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 PDE12Q6L8Q7 609 aaKnown RBP5.56□□□□□ -1.52
CSMD1-215ENST00000537824 ZNF598Q86UK7 904 aaKnown RBP5.56□□□□□ -1.52
CSMD1-215ENST00000537824 OR5T3Q8NGG3 340 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 PPCDCQ96CD2 204 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 LIN37Q96GY3 246 aaPredicted RBP5.56□□□□□ -1.52
CSMD1-215ENST00000537824 MIPEPQ99797 713 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 NFKBIZQ9BYH8 718 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 GULP1Q9UBP9 304 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 AGRNO00468 2067 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 POLR1CO15160 346 aaPredicted RBP5.56□□□□□ -1.52
CSMD1-215ENST00000537824 H2AFB2P0C5Z0 115 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 SAGP10523 405 aaPredicted RBP5.56□□□□□ -1.52
CSMD1-215ENST00000537824 VAMP1P23763 118 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 SREBF1P36956 1147 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 HSPA14Q0VDF9 509 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 CERCAMQ5T4B2 595 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 RNASEH2BQ5TBB1 312 aaKnown RBP5.56□□□□□ -1.52
CSMD1-215ENST00000537824 XRRA1Q6P2D8 792 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 DENND1CQ8IV53 801 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 LGI4Q8N135 537 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 AURKBQ96GD4 344 aaPredicted RBP5.56□□□□□ -1.52
CSMD1-215ENST00000537824 ZNF696Q9H7X3 374 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 LYARQ9NX58 379 aaKnown RBP5.56□□□□□ -1.52
CSMD1-215ENST00000537824 ACSL5Q9ULC5 683 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 IFT172Q9UG01 1749 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 OR6C65A6NJZ3 312 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 F5H0A9 414 aaPredicted RBP5.56□□□□□ -1.52
CSMD1-215ENST00000537824 GOT1P17174 413 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 GSK3BP49841 420 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 SLC3A1Q07837 685 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 JAZF1Q86VZ6 243 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 KLHL36Q8N4N3 616 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 ZSWIM3Q96MP5 696 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 FUNDC2Q9BWH2 189 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 NPHP4O75161 1426 aaPredicted RBP5.56□□□□□ -1.52
CSMD1-215ENST00000537824 ADGRB2O60241 1585 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 SMIM22K7EJ46 135 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 HCN1O60741 890 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 TPPPO94811 219 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 SCGB1D2O95969 90 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 ADRB2P07550 413 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 MMP8P22894 467 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 GNALP38405 381 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 GXYLT1Q4G148 440 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 GNASQ5JWF2 1037 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 FBXL16Q8N461 479 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 EMID1Q96A84 441 aaPredicted RBP5.56□□□□□ -1.52
CSMD1-215ENST00000537824 PTERQ96BW5 349 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 CNDP2Q96KP4 475 aaKnown RBP5.56□□□□□ -1.52
CSMD1-215ENST00000537824 PRICKLE1Q96MT3 831 aaPredicted RBP5.56□□□□□ -1.52
CSMD1-215ENST00000537824 ARPC5LQ9BPX5 153 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 THG1LQ9NWX6 298 aaKnown RBP5.56□□□□□ -1.52
CSMD1-215ENST00000537824 SCN4AP35499 1836 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 DAPL1A0PJW8 107 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 OR10H2O60403 315 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms