RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 ACOX1Q15067 660 aa15.28■□□□□ 0.04
MKS1-204ENST00000537529 POM121L1PQ3SYA9 428 aa15.28■□□□□ 0.04
MKS1-204ENST00000537529 INTS11Q5TA45 600 aaKnown RBP15.28■□□□□ 0.04
MKS1-204ENST00000537529 PDE12Q6L8Q7 609 aaKnown RBP15.28■□□□□ 0.04
MKS1-204ENST00000537529 PARS2Q7L3T8 475 aaKnown RBP15.28■□□□□ 0.04
MKS1-204ENST00000537529 RASGRP3Q8IV61 690 aa15.28■□□□□ 0.04
MKS1-204ENST00000537529 FAM110BQ8TC76 370 aa15.28■□□□□ 0.04
MKS1-204ENST00000537529 GLYATL1Q969I3 302 aa15.28■□□□□ 0.04
MKS1-204ENST00000537529 MTFMTQ96DP5 389 aaKnown RBP15.28■□□□□ 0.04
MKS1-204ENST00000537529 CENPNQ96H22 339 aaPredicted RBP15.28■□□□□ 0.04
MKS1-204ENST00000537529 FAM83CQ9BQN1 747 aa15.28■□□□□ 0.04
MKS1-204ENST00000537529 MTIF3Q9H2K0 278 aaKnown RBP15.28■□□□□ 0.04
MKS1-204ENST00000537529 CLMPQ9H6B4 373 aa15.28■□□□□ 0.04
MKS1-204ENST00000537529 AK5Q9Y6K8 562 aa15.28■□□□□ 0.04
MKS1-204ENST00000537529 DOCK6Q96HP0 2047 aa15.27■□□□□ 0.04
MKS1-204ENST00000537529 NOTCH4Q99466 2003 aa15.27■□□□□ 0.04
MKS1-204ENST00000537529 C7orf72A4D263 438 aa15.27■□□□□ 0.03
MKS1-204ENST00000537529 SAC3D1A6NKF1 404 aa15.27■□□□□ 0.03
MKS1-204ENST00000537529 PSMD11O00231 422 aa15.27■□□□□ 0.03
MKS1-204ENST00000537529 PER2O15055 1255 aa15.27■□□□□ 0.03
MKS1-204ENST00000537529 ATG13O75143 517 aa15.27■□□□□ 0.03
MKS1-204ENST00000537529 BCKDHAP12694 445 aa15.27■□□□□ 0.03
MKS1-204ENST00000537529 MTPNP58546 118 aa15.27■□□□□ 0.03
MKS1-204ENST00000537529 MAPKAPK3Q16644 382 aa15.27■□□□□ 0.03
MKS1-204ENST00000537529 ZXDCQ2QGD7 858 aaPredicted RBP15.27■□□□□ 0.03
MKS1-204ENST00000537529 USP39Q53GS9 565 aaKnown RBP15.27■□□□□ 0.03
MKS1-204ENST00000537529 FOXB2Q5VYV0 432 aa15.27■□□□□ 0.03
MKS1-204ENST00000537529 NEK5Q6P3R8 708 aa15.27■□□□□ 0.03
MKS1-204ENST00000537529 LIPIQ6XZB0 460 aa15.27■□□□□ 0.03
MKS1-204ENST00000537529 SPRED2Q7Z698 418 aa15.27■□□□□ 0.03
MKS1-204ENST00000537529 RALGPS2Q86X27 583 aaPredicted RBP15.27■□□□□ 0.03
MKS1-204ENST00000537529 CHERPQ8IWX8 916 aaKnown RBP15.27■□□□□ 0.03
MKS1-204ENST00000537529 TBC1D21Q8IYX1 336 aa15.27■□□□□ 0.03
MKS1-204ENST00000537529 AADATQ8N5Z0 425 aa15.27■□□□□ 0.03
MKS1-204ENST00000537529 BEND7Q8N7W2 519 aaPredicted RBP15.27■□□□□ 0.03
MKS1-204ENST00000537529 PAPD5Q8NDF8 572 aaKnown RBP15.27■□□□□ 0.03
MKS1-204ENST00000537529 SMG7Q92540 1137 aaKnown RBP15.27■□□□□ 0.03
MKS1-204ENST00000537529 GLMNQ92990 594 aa15.27■□□□□ 0.03
MKS1-204ENST00000537529 AP2M1Q96CW1 435 aa15.27■□□□□ 0.03
MKS1-204ENST00000537529 NSMCE2Q96MF7 247 aa15.27■□□□□ 0.03
MKS1-204ENST00000537529 LRRC3BQ96PB8 259 aa15.27■□□□□ 0.03
MKS1-204ENST00000537529 ZNF696Q9H7X3 374 aa15.27■□□□□ 0.03
MKS1-204ENST00000537529 C8orf4Q9NR00 106 aa15.27■□□□□ 0.03
MKS1-204ENST00000537529 KPNA3O00505 521 aaPredicted RBP15.26■□□□□ 0.03
MKS1-204ENST00000537529 WNT9AO14904 365 aa15.26■□□□□ 0.03
MKS1-204ENST00000537529 TPST1O60507 370 aa15.26■□□□□ 0.03
MKS1-204ENST00000537529 TULP3O75386 442 aa15.26■□□□□ 0.03
MKS1-204ENST00000537529 PRNPP04156 253 aa15.26■□□□□ 0.03
MKS1-204ENST00000537529 PRPS2P11908 318 aa15.26■□□□□ 0.03
MKS1-204ENST00000537529 ITPKAP23677 461 aa15.26■□□□□ 0.03
MKS1-204ENST00000537529 PRPH2P23942 346 aa15.26■□□□□ 0.03
MKS1-204ENST00000537529 HRH2P25021 359 aa15.26■□□□□ 0.03
MKS1-204ENST00000537529 MAPK9P45984 424 aa15.26■□□□□ 0.03
MKS1-204ENST00000537529 OR4D2P58180 307 aa15.26■□□□□ 0.03
MKS1-204ENST00000537529 RPS14P62263 151 aaKnown RBP15.26■□□□□ 0.03
MKS1-204ENST00000537529 SELPLGQ14242 412 aa15.26■□□□□ 0.03
MKS1-204ENST00000537529 MAP7Q14244 749 aa15.26■□□□□ 0.03
MKS1-204ENST00000537529 AAK1Q2M2I8 961 aa15.26■□□□□ 0.03
MKS1-204ENST00000537529 ZNF648Q5T619 568 aaPredicted RBP15.26■□□□□ 0.03
MKS1-204ENST00000537529 SUSD1Q6UWL2 747 aa15.26■□□□□ 0.03
MKS1-204ENST00000537529 C12orf40Q86WS4 652 aa15.26■□□□□ 0.03
MKS1-204ENST00000537529 ZNF366Q8N895 744 aa15.26■□□□□ 0.03
MKS1-204ENST00000537529 GTF2H4Q92759 462 aa15.26■□□□□ 0.03
MKS1-204ENST00000537529 TMEM159Q96B96 161 aa15.26■□□□□ 0.03
MKS1-204ENST00000537529 PYCR2Q96C36 320 aa15.26■□□□□ 0.03
MKS1-204ENST00000537529 CMTM7Q96FZ5 175 aa15.26■□□□□ 0.03
MKS1-204ENST00000537529 SLC29A1Q99808 456 aa15.26■□□□□ 0.03
MKS1-204ENST00000537529 C9orf16Q9BUW7 83 aa15.26■□□□□ 0.03
MKS1-204ENST00000537529 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.26■□□□□ 0.03
MKS1-204ENST00000537529 SLC22A14Q9Y267 594 aa15.26■□□□□ 0.03
MKS1-204ENST00000537529 AP3M1Q9Y2T2 418 aa15.26■□□□□ 0.03
MKS1-204ENST00000537529 PIKFYVEQ9Y2I7 2098 aa15.26■□□□□ 0.03
MKS1-204ENST00000537529 SERTM1A2A2V5 107 aa15.26■□□□□ 0.03
MKS1-204ENST00000537529 TSPAN6O43657 245 aa15.26■□□□□ 0.03
MKS1-204ENST00000537529 PSIP1O75475 530 aaKnown RBP15.26■□□□□ 0.03
MKS1-204ENST00000537529 GMNNO75496 209 aa15.26■□□□□ 0.03
MKS1-204ENST00000537529 PGRP06401 933 aa15.26■□□□□ 0.03
MKS1-204ENST00000537529 SMIM18P0DKX4 95 aa15.26■□□□□ 0.03
MKS1-204ENST00000537529 CKMT2P17540 419 aa15.26■□□□□ 0.03
MKS1-204ENST00000537529 HALP42357 657 aa15.26■□□□□ 0.03
MKS1-204ENST00000537529 PRLHRP49683 370 aa15.26■□□□□ 0.03
MKS1-204ENST00000537529 TXNL4AP83876 142 aaKnown RBP15.26■□□□□ 0.03
MKS1-204ENST00000537529 LIN52Q52LA3 116 aa15.26■□□□□ 0.03
MKS1-204ENST00000537529 SPANXN4Q5MJ08 99 aa15.26■□□□□ 0.03
MKS1-204ENST00000537529 GLYATQ6IB77 296 aa15.26■□□□□ 0.03
MKS1-204ENST00000537529 KRTCAP2Q8N6L1 136 aa15.26■□□□□ 0.03
MKS1-204ENST00000537529 RASGEF1AQ8N9B8 481 aa15.26■□□□□ 0.03
MKS1-204ENST00000537529 TNIP2Q8NFZ5 429 aa15.26■□□□□ 0.03
MKS1-204ENST00000537529 DNAJB8Q8NHS0 232 aa15.26■□□□□ 0.03
MKS1-204ENST00000537529 NUDT8Q8WV74 236 aa15.26■□□□□ 0.03
MKS1-204ENST00000537529 ATL1Q8WXF7 558 aa15.26■□□□□ 0.03
MKS1-204ENST00000537529 BIRC7Q96CA5 298 aa15.26■□□□□ 0.03
MKS1-204ENST00000537529 RSPRY1Q96DX4 576 aa15.26■□□□□ 0.03
MKS1-204ENST00000537529 SH3GL1Q99961 368 aa15.26■□□□□ 0.03
MKS1-204ENST00000537529 CCM2Q9BSQ5 444 aa15.26■□□□□ 0.03
MKS1-204ENST00000537529 PIF1Q9H611 641 aa15.26■□□□□ 0.03
MKS1-204ENST00000537529 FAM8A1Q9UBU6 413 aa15.26■□□□□ 0.03
MKS1-204ENST00000537529 USP22Q9UPT9 525 aa15.26■□□□□ 0.03
MKS1-204ENST00000537529 TMED5Q9Y3A6 229 aa15.26■□□□□ 0.03
MKS1-204ENST00000537529 ARHGEF33A8MVX0 844 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms