RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 C10orf120Q5SQS8 335 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 RPS27LQ71UM5 84 aaKnown RBP5.3□□□□□ -1.56
PTPRD-213ENST00000537002 C11orf24Q96F05 449 aaPredicted RBP5.3□□□□□ -1.56
PTPRD-213ENST00000537002 ZNF778Q96MU6 729 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 FOPNLQ96NB1 174 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 MYOZ2Q9NPC6 264 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 C11orf16Q9NQ32 467 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 VTNP04004 478 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 NAGAP17050 411 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 UQCRC1P31930 480 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 FCGRTP55899 365 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 ZNF33AQ06730 810 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 STX4Q12846 297 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 HKDC1Q2TB90 917 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 INAVAQ3KP66 663 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 C1orf220Q5T0J3 134 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 RGMBQ6NW40 437 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 DEF8Q6ZN54 512 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 MAVSQ7Z434 540 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 NT5DC4Q86YG4 428 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 DYNC2LI1Q8TCX1 351 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 BPIFB1Q8TDL5 484 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 BIRC7Q96CA5 298 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 MOCOSQ96EN8 888 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 METTL2AQ96IZ6 378 aaKnown RBP5.3□□□□□ -1.56
PTPRD-213ENST00000537002 CSPG4P5Q96PW8 444 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 PANX1Q96RD7 426 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 GPR22Q99680 433 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 APOBEC3GQ9HC16 384 aaKnown RBP5.3□□□□□ -1.56
PTPRD-213ENST00000537002 TRPC4Q9UBN4 977 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 TNFRSF11BO00300 401 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 PRSS23O95084 383 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 JUNDP17535 347 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 HDCP19113 662 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 MATN1P21941 496 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 ARCN1P48444 511 aaKnown RBP5.3□□□□□ -1.56
PTPRD-213ENST00000537002 TSTQ16762 297 aaKnown RBP5.3□□□□□ -1.56
PTPRD-213ENST00000537002 SH3PXD2AQ5TCZ1 1133 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 CXorf57Q6NSI4 855 aaKnown RBP5.3□□□□□ -1.56
PTPRD-213ENST00000537002 LDB1Q86U70 411 aaPredicted RBP5.3□□□□□ -1.56
PTPRD-213ENST00000537002 BSNDQ8WZ55 320 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 ADGRE3Q9BY15 652 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 NT5DC2Q9H857 520 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 KRCC1Q9NPI7 259 aaPredicted RBP5.3□□□□□ -1.56
PTPRD-213ENST00000537002 ZNF70Q9UC06 446 aaPredicted RBP5.3□□□□□ -1.56
PTPRD-213ENST00000537002 IGLV3-22A0A075B6J6 115 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 LOC105371267A0A1B0GV96 52 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 CLTBP09497 229 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 TGFB3P10600 412 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 IL1R2P27930 398 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 RFX3P48380 749 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 LAPTM4AQ15012 233 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 CCDC36Q8IYA8 594 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 PYROXD2Q8N2H3 581 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 C7orf57Q8NEG2 295 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 ZFP90Q8TF47 636 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 FRMD6Q96NE9 622 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 TMEM74Q96NL1 305 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 CCDC115Q96NT0 180 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 ERMAPQ96PL5 475 aaPredicted RBP5.3□□□□□ -1.56
PTPRD-213ENST00000537002 SLC30A2Q9BRI3 323 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 SMURF2Q9HAU4 748 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 PRDM8Q9NQV8 689 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 MAT2BQ9NZL9 334 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 ACSL5Q9ULC5 683 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 PCDHGB6Q9Y5F9 930 aa5.3□□□□□ -1.56
PTPRD-213ENST00000537002 TIMM13Q9Y5L4 95 aaPredicted RBP5.3□□□□□ -1.56
PTPRD-213ENST00000537002 TCRBV5S1A1TA0A578 114 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 MPZL2O60487 215 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 ITGB1P05556 798 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 PNPLA4P41247 253 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 NUDT6P53370 316 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 TBCEQ15813 527 aaPredicted RBP5.29□□□□□ -1.56
PTPRD-213ENST00000537002 CELF3Q5SZQ8 465 aaKnown RBP5.29□□□□□ -1.56
PTPRD-213ENST00000537002 DPY19L3Q6ZPD9 716 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 TIGD4Q8IY51 512 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 GDPD1Q8N9F7 314 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 PSD4Q8NDX1 1056 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 SELENOMQ8WWX9 145 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 TBC1D20Q96BZ9 403 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 ITCHQ96J02 903 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 SEPT5Q99719 369 aaPredicted RBP5.29□□□□□ -1.56
PTPRD-213ENST00000537002 BARD1Q99728 777 aaKnown RBP5.29□□□□□ -1.56
PTPRD-213ENST00000537002 LRFN2Q9ULH4 789 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 DHRS7Q9Y394 339 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 LOC100130705A0A1B0GUX0 176 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 SMIM30A4D0T7 59 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 RFXANKO14593 260 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 ULK1O75385 1050 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 PSMA1P25786 263 aaKnown RBP5.29□□□□□ -1.56
PTPRD-213ENST00000537002 PBLDP30039 288 aaPredicted RBP5.29□□□□□ -1.56
PTPRD-213ENST00000537002 IL2P60568 153 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 MAB21L1Q13394 359 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 EIF4HQ15056 248 aaKnown RBP5.29□□□□□ -1.56
PTPRD-213ENST00000537002 FXNQ16595 210 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 ATAD3CQ5T2N8 411 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 RNF219Q5W0B1 726 aaPredicted RBP5.29□□□□□ -1.56
PTPRD-213ENST00000537002 FAM92BQ6ZTR7 304 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 GLT6D1Q7Z4J2 308 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 COMMD7Q86VX2 200 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms