RNA–Protein interactions for RNA: ENST00000536513.5

ABCA4-207, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 1 (best) BASIC

Gene ABCA4, Length 3,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-207ENST00000536513 DNTTP04053 509 aa8.06□□□□□ -1.12
ABCA4-207ENST00000536513 SERPINA6P08185 405 aa8.06□□□□□ -1.12
ABCA4-207ENST00000536513 LAMP2P13473 410 aa8.06□□□□□ -1.12
ABCA4-207ENST00000536513 ZNF37AP17032 561 aaPredicted RBP8.06□□□□□ -1.12
ABCA4-207ENST00000536513 S100A1P23297 94 aa8.06□□□□□ -1.12
ABCA4-207ENST00000536513 HOXD12P35452 270 aa8.06□□□□□ -1.12
ABCA4-207ENST00000536513 BDKRB1P46663 353 aa8.06□□□□□ -1.12
ABCA4-207ENST00000536513 CTSCP53634 463 aa8.06□□□□□ -1.12
ABCA4-207ENST00000536513 PTSQ03393 145 aa8.06□□□□□ -1.12
ABCA4-207ENST00000536513 RFTN1Q14699 578 aaPredicted RBP8.06□□□□□ -1.12
ABCA4-207ENST00000536513 SF1Q15637 639 aaKnown RBP8.06□□□□□ -1.12
ABCA4-207ENST00000536513 PHKG1Q16816 387 aa8.06□□□□□ -1.12
ABCA4-207ENST00000536513 DUSP6Q16828 381 aa8.06□□□□□ -1.12
ABCA4-207ENST00000536513 UGT3A1Q6NUS8 523 aa8.06□□□□□ -1.12
ABCA4-207ENST00000536513 GK5Q6ZS86 529 aa8.06□□□□□ -1.12
ABCA4-207ENST00000536513 FAM160A2Q8N612 972 aaPredicted RBP8.06□□□□□ -1.12
ABCA4-207ENST00000536513 TEX26Q8N6G2 289 aa8.06□□□□□ -1.12
ABCA4-207ENST00000536513 FNDC5Q8NAU1 212 aa8.06□□□□□ -1.12
ABCA4-207ENST00000536513 MRPL38Q96DV4 380 aaKnown RBP8.06□□□□□ -1.12
ABCA4-207ENST00000536513 RIPOR3Q96MK2 946 aa8.06□□□□□ -1.12
ABCA4-207ENST00000536513 NPAS2Q99743 824 aa8.06□□□□□ -1.12
ABCA4-207ENST00000536513 CIB1Q99828 191 aa8.06□□□□□ -1.12
ABCA4-207ENST00000536513 AARSD1Q9BTE6 412 aaKnown RBP8.06□□□□□ -1.12
ABCA4-207ENST00000536513 DHRS4Q9BTZ2 278 aa8.06□□□□□ -1.12
ABCA4-207ENST00000536513 TRIM54Q9BYV2 358 aa8.06□□□□□ -1.12
ABCA4-207ENST00000536513 EFCAB1Q9HAE3 211 aa8.06□□□□□ -1.12
ABCA4-207ENST00000536513 TM7SF3Q9NS93 570 aa8.06□□□□□ -1.12
ABCA4-207ENST00000536513 ADAMTS6Q9UKP5 1117 aa8.06□□□□□ -1.12
ABCA4-207ENST00000536513 MAGED1Q9Y5V3 778 aaPredicted RBP8.06□□□□□ -1.12
ABCA4-207ENST00000536513 CELSR3Q9NYQ7 3312 aa8.06□□□□□ -1.12
ABCA4-207ENST00000536513 STX16-NPEPL1H3BU86 382 aa8.05□□□□□ -1.12
ABCA4-207ENST00000536513 WDR47O94967 919 aa8.05□□□□□ -1.12
ABCA4-207ENST00000536513 CYP2A6P11509 494 aaPredicted RBP8.05□□□□□ -1.12
ABCA4-207ENST00000536513 JAK1P23458 1154 aa8.05□□□□□ -1.12
ABCA4-207ENST00000536513 RPIAP49247 311 aa8.05□□□□□ -1.12
ABCA4-207ENST00000536513 LSM3P62310 102 aaKnown RBP8.05□□□□□ -1.12
ABCA4-207ENST00000536513 UBE3AQ05086 875 aa8.05□□□□□ -1.12
ABCA4-207ENST00000536513 NAE1Q13564 534 aa8.05□□□□□ -1.12
ABCA4-207ENST00000536513 OTUD3Q5T2D3 398 aaPredicted RBP8.05□□□□□ -1.12
ABCA4-207ENST00000536513 RGL4Q8IZJ4 473 aa8.05□□□□□ -1.12
ABCA4-207ENST00000536513 SLC7A5P1Q8MH63 180 aa8.05□□□□□ -1.12
ABCA4-207ENST00000536513 FNDC8Q8TC99 324 aa8.05□□□□□ -1.12
ABCA4-207ENST00000536513 MTERF1Q99551 399 aaKnown RBP8.05□□□□□ -1.12
ABCA4-207ENST00000536513 SCHIP1Q9P0W5 487 aaPredicted RBP8.05□□□□□ -1.12
ABCA4-207ENST00000536513 STON1Q9Y6Q2 735 aa8.05□□□□□ -1.12
ABCA4-207ENST00000536513 UNC13CQ8NB66 2214 aa8.05□□□□□ -1.12
ABCA4-207ENST00000536513 ZNF839A8K0R7 811 aa8.05□□□□□ -1.12
ABCA4-207ENST00000536513 GREM1O60565 184 aa8.05□□□□□ -1.12
ABCA4-207ENST00000536513 COX4I1P13073 169 aa8.05□□□□□ -1.12
ABCA4-207ENST00000536513 HGFP14210 728 aa8.05□□□□□ -1.12
ABCA4-207ENST00000536513 SLC2A4P14672 509 aa8.05□□□□□ -1.12
ABCA4-207ENST00000536513 TSHRP16473 764 aa8.05□□□□□ -1.12
ABCA4-207ENST00000536513 GRK2P25098 689 aa8.05□□□□□ -1.12
ABCA4-207ENST00000536513 PDHA2P29803 388 aa8.05□□□□□ -1.12
ABCA4-207ENST00000536513 MAPK9P45984 424 aa8.05□□□□□ -1.12
ABCA4-207ENST00000536513 ZNF33AQ06730 810 aa8.05□□□□□ -1.12
ABCA4-207ENST00000536513 BNIP3Q12983 259 aa8.05□□□□□ -1.12
ABCA4-207ENST00000536513 TLR1Q15399 786 aa8.05□□□□□ -1.12
ABCA4-207ENST00000536513 LSM12Q3MHD2 195 aaKnown RBP8.05□□□□□ -1.12
ABCA4-207ENST00000536513 PDCD4Q53EL6 469 aaKnown RBP8.05□□□□□ -1.12
ABCA4-207ENST00000536513 RSBN1Q5VWQ0 802 aaPredicted RBP8.05□□□□□ -1.12
ABCA4-207ENST00000536513 KIAA1211LQ6NV74 962 aa8.05□□□□□ -1.12
ABCA4-207ENST00000536513 ANKRD54Q6NXT1 300 aa8.05□□□□□ -1.12
ABCA4-207ENST00000536513 DUS1LQ6P1R4 473 aaKnown RBP8.05□□□□□ -1.12
ABCA4-207ENST00000536513 ZNF761Q86XN6 746 aaPredicted RBP8.05□□□□□ -1.12
ABCA4-207ENST00000536513 PLD3Q8IV08 490 aa8.05□□□□□ -1.12
ABCA4-207ENST00000536513 PARP8Q8N3A8 854 aa8.05□□□□□ -1.12
ABCA4-207ENST00000536513 ALG14Q96F25 216 aa8.05□□□□□ -1.12
ABCA4-207ENST00000536513 SCRN2Q96FV2 425 aa8.05□□□□□ -1.12
ABCA4-207ENST00000536513 P2RY13Q9BPV8 354 aa8.05□□□□□ -1.12
ABCA4-207ENST00000536513 TGIF2Q9GZN2 237 aa8.05□□□□□ -1.12
ABCA4-207ENST00000536513 ARNT2Q9HBZ2 717 aa8.05□□□□□ -1.12
ABCA4-207ENST00000536513 TRIM39Q9HCM9 518 aa8.05□□□□□ -1.12
ABCA4-207ENST00000536513 SERGEFQ9UGK8 458 aa8.05□□□□□ -1.12
ABCA4-207ENST00000536513 IKZF3Q9UKT9 509 aa8.05□□□□□ -1.12
ABCA4-207ENST00000536513 ASB1Q9Y576 335 aa8.05□□□□□ -1.12
ABCA4-207ENST00000536513 IRAK3Q9Y616 596 aa8.05□□□□□ -1.12
ABCA4-207ENST00000536513 A0A1B0GTL3 188 aa8.05□□□□□ -1.12
ABCA4-207ENST00000536513 G3V2L1 256 aa8.05□□□□□ -1.12
ABCA4-207ENST00000536513 H0Y8X5 98 aa8.05□□□□□ -1.12
ABCA4-207ENST00000536513 TRAFD1O14545 582 aaPredicted RBP8.05□□□□□ -1.12
ABCA4-207ENST00000536513 WNT9AO14904 365 aa8.05□□□□□ -1.12
ABCA4-207ENST00000536513 SORBS2O94875 1100 aaKnown RBP8.05□□□□□ -1.12
ABCA4-207ENST00000536513 C1QAP02745 245 aa8.05□□□□□ -1.12
ABCA4-207ENST00000536513 APOA4P06727 396 aa8.05□□□□□ -1.12
ABCA4-207ENST00000536513 MSL3P1P0C860 447 aa8.05□□□□□ -1.12
ABCA4-207ENST00000536513 CR2P20023 1033 aa8.05□□□□□ -1.12
ABCA4-207ENST00000536513 MAPK1P28482 360 aa8.05□□□□□ -1.12
ABCA4-207ENST00000536513 ZNF140P52738 457 aaPredicted RBP8.05□□□□□ -1.12
ABCA4-207ENST00000536513 ARPC4P59998 168 aa8.05□□□□□ -1.12
ABCA4-207ENST00000536513 MRPL28Q13084 256 aaKnown RBP8.05□□□□□ -1.12
ABCA4-207ENST00000536513 TTLL9Q3SXZ7 439 aa8.05□□□□□ -1.12
ABCA4-207ENST00000536513 GALNT18Q6P9A2 607 aa8.05□□□□□ -1.12
ABCA4-207ENST00000536513 SNX20Q7Z614 316 aa8.05□□□□□ -1.12
ABCA4-207ENST00000536513 ISCA2Q86U28 154 aa8.05□□□□□ -1.12
ABCA4-207ENST00000536513 CLEC4FQ8N1N0 589 aa8.05□□□□□ -1.12
ABCA4-207ENST00000536513 KIAA1958Q8N8K9 716 aa8.05□□□□□ -1.12
ABCA4-207ENST00000536513 RPLP0P6Q8NHW5 317 aa8.05□□□□□ -1.12
ABCA4-207ENST00000536513 PPP1R14BQ96C90 147 aa8.05□□□□□ -1.12
ABCA4-207ENST00000536513 SIPA1Q96FS4 1042 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms