RNA–Protein interactions for RNA: ENST00000536187.6

CACNB3-202, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2 BASIC

Gene CACNB3, Length 1,872 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-202ENST00000536187 DUOXA1Q1HG43 343 aa17.39■□□□□ 0.37
CACNB3-202ENST00000536187 FAM47EQ6ZV65 393 aa17.39■□□□□ 0.37
CACNB3-202ENST00000536187 MCOLN3Q8TDD5 553 aa17.39■□□□□ 0.37
CACNB3-202ENST00000536187 ERVK-6Q9BXR3 956 aa17.39■□□□□ 0.37
CACNB3-202ENST00000536187 ERVMER34-1Q9H9K5 563 aa17.39■□□□□ 0.37
CACNB3-202ENST00000536187 E2F3O00716 465 aa17.38■□□□□ 0.37
CACNB3-202ENST00000536187 UBFD1O14562 309 aaKnown RBP17.38■□□□□ 0.37
CACNB3-202ENST00000536187 RPS17P08708 135 aaKnown RBP17.38■□□□□ 0.37
CACNB3-202ENST00000536187 IMPDH1P20839 514 aa17.38■□□□□ 0.37
CACNB3-202ENST00000536187 MAP4P27816 1152 aaKnown RBP17.38■□□□□ 0.37
CACNB3-202ENST00000536187 LSP1P33241 339 aa17.38■□□□□ 0.37
CACNB3-202ENST00000536187 DNAJB13P59910 316 aa17.38■□□□□ 0.37
CACNB3-202ENST00000536187 KANSL1Q7Z3B3 1105 aa17.38■□□□□ 0.37
CACNB3-202ENST00000536187 DCUN1D3Q8IWE4 304 aa17.38■□□□□ 0.37
CACNB3-202ENST00000536187 DCBLD1Q8N8Z6 715 aa17.38■□□□□ 0.37
CACNB3-202ENST00000536187 LINC01555Q8NAE3 123 aa17.38■□□□□ 0.37
CACNB3-202ENST00000536187 SUMF1Q8NBK3 374 aa17.38■□□□□ 0.37
CACNB3-202ENST00000536187 FBXO15Q8NCQ5 510 aaPredicted RBP17.38■□□□□ 0.37
CACNB3-202ENST00000536187 ZDHHC1Q8WTX9 485 aa17.38■□□□□ 0.37
CACNB3-202ENST00000536187 L3HYPDHQ96EM0 354 aa17.38■□□□□ 0.37
CACNB3-202ENST00000536187 CAMK1GQ96NX5 476 aa17.38■□□□□ 0.37
CACNB3-202ENST00000536187 SORT1Q99523 831 aa17.38■□□□□ 0.37
CACNB3-202ENST00000536187 TRIT1Q9H3H1 467 aaKnown RBP17.38■□□□□ 0.37
CACNB3-202ENST00000536187 ABCF3Q9NUQ8 709 aa17.38■□□□□ 0.37
CACNB3-202ENST00000536187 WWOXQ9NZC7 414 aa17.38■□□□□ 0.37
CACNB3-202ENST00000536187 SPASTQ9UBP0 616 aa17.38■□□□□ 0.37
CACNB3-202ENST00000536187 PCTPQ9UKL6 214 aa17.38■□□□□ 0.37
CACNB3-202ENST00000536187 PRDM4Q9UKN5 801 aa17.38■□□□□ 0.37
CACNB3-202ENST00000536187 SH2B3Q9UQQ2 575 aa17.38■□□□□ 0.37
CACNB3-202ENST00000536187 GOLGA4Q13439 2230 aaKnown RBP17.38■□□□□ 0.37
CACNB3-202ENST00000536187 NOBOXO60393 691 aa17.37■□□□□ 0.37
CACNB3-202ENST00000536187 ANXA5P08758 320 aa17.37■□□□□ 0.37
CACNB3-202ENST00000536187 NEFHP12036 1026 aa17.37■□□□□ 0.37
CACNB3-202ENST00000536187 EPORP19235 508 aa17.37■□□□□ 0.37
CACNB3-202ENST00000536187 PRDX3P30048 256 aaKnown RBP17.37■□□□□ 0.37
CACNB3-202ENST00000536187 CDKL1Q00532 357 aa17.37■□□□□ 0.37
CACNB3-202ENST00000536187 SF3A3Q12874 501 aaKnown RBP eCLIP17.37■□□□□ 0.37
CACNB3-202ENST00000536187 ELOCQ15369 112 aa17.37■□□□□ 0.37
CACNB3-202ENST00000536187 ZNF423Q2M1K9 1284 aa17.37■□□□□ 0.37
CACNB3-202ENST00000536187 PTCHD3Q3KNS1 767 aa17.37■□□□□ 0.37
CACNB3-202ENST00000536187 SLC23A3Q6PIS1 610 aa17.37■□□□□ 0.37
CACNB3-202ENST00000536187 SUSD1Q6UWL2 747 aa17.37■□□□□ 0.37
CACNB3-202ENST00000536187 LRRC56Q8IYG6 542 aaPredicted RBP17.37■□□□□ 0.37
CACNB3-202ENST00000536187 SFRP1Q8N474 314 aa17.37■□□□□ 0.37
CACNB3-202ENST00000536187 OR52E1Q8NGJ3 308 aa17.37■□□□□ 0.37
CACNB3-202ENST00000536187 OR9A1PQ8NGU1 263 aa17.37■□□□□ 0.37
CACNB3-202ENST00000536187 SKA1Q96BD8 255 aa17.37■□□□□ 0.37
CACNB3-202ENST00000536187 ZNF317Q96PQ6 595 aaPredicted RBP17.37■□□□□ 0.37
CACNB3-202ENST00000536187 CCDC134Q9H6E4 229 aa17.37■□□□□ 0.37
CACNB3-202ENST00000536187 GAREM1Q9H706 876 aa17.37■□□□□ 0.37
CACNB3-202ENST00000536187 INTS7Q9NVH2 962 aaKnown RBP17.37■□□□□ 0.37
CACNB3-202ENST00000536187 MID2Q9UJV3 735 aa17.37■□□□□ 0.37
CACNB3-202ENST00000536187 ICKQ9UPZ9 632 aa17.37■□□□□ 0.37
CACNB3-202ENST00000536187 A0A1B0GTQ1 180 aa17.37■□□□□ 0.37
CACNB3-202ENST00000536187 LMO7DNF2Z398 122 aa17.37■□□□□ 0.37
CACNB3-202ENST00000536187 CASC3O15234 703 aaKnown RBP17.37■□□□□ 0.37
CACNB3-202ENST00000536187 SNNO75324 88 aaPredicted RBP17.37■□□□□ 0.37
CACNB3-202ENST00000536187 SUPT7LO94864 414 aa17.37■□□□□ 0.37
CACNB3-202ENST00000536187 SERPINE1P05121 402 aa17.37■□□□□ 0.37
CACNB3-202ENST00000536187 HIST1H2AGP0C0S8 130 aaPredicted RBP17.37■□□□□ 0.37
CACNB3-202ENST00000536187 HIST1H2ADP20671 130 aa17.37■□□□□ 0.37
CACNB3-202ENST00000536187 EPHA8P29322 1005 aaPredicted RBP17.37■□□□□ 0.37
CACNB3-202ENST00000536187 HOXD12P35452 270 aa17.37■□□□□ 0.37
CACNB3-202ENST00000536187 HALP42357 657 aa17.37■□□□□ 0.37
CACNB3-202ENST00000536187 SLC6A12P48065 614 aa17.37■□□□□ 0.37
CACNB3-202ENST00000536187 NUBP1P53384 320 aa17.37■□□□□ 0.37
CACNB3-202ENST00000536187 UBE2IP63279 158 aaKnown RBP17.37■□□□□ 0.37
CACNB3-202ENST00000536187 AGTRAPQ6RW13 159 aa17.37■□□□□ 0.37
CACNB3-202ENST00000536187 SLC22A9Q8IVM8 553 aa17.37■□□□□ 0.37
CACNB3-202ENST00000536187 TBC1D21Q8IYX1 336 aa17.37■□□□□ 0.37
CACNB3-202ENST00000536187 LRRC34Q8IZ02 419 aa17.37■□□□□ 0.37
CACNB3-202ENST00000536187 LRRC8CQ8TDW0 803 aa17.37■□□□□ 0.37
CACNB3-202ENST00000536187 FBXL8Q96CD0 374 aa17.37■□□□□ 0.37
CACNB3-202ENST00000536187 HIST1H2AHQ96KK5 128 aa17.37■□□□□ 0.37
CACNB3-202ENST00000536187 OR4K3Q96R72 315 aa17.37■□□□□ 0.37
CACNB3-202ENST00000536187 HIST1H2AJQ99878 128 aa17.37■□□□□ 0.37
CACNB3-202ENST00000536187 H2AFJQ9BTM1 129 aa17.37■□□□□ 0.37
CACNB3-202ENST00000536187 SEMA4BQ9NPR2 832 aaPredicted RBP17.37■□□□□ 0.37
CACNB3-202ENST00000536187 CPNE7Q9UBL6 633 aa17.37■□□□□ 0.37
CACNB3-202ENST00000536187 SNRNP200O75643 2136 aaKnown RBP17.36■□□□□ 0.37
CACNB3-202ENST00000536187 RALGAPA1Q6GYQ0 2036 aa17.36■□□□□ 0.37
CACNB3-202ENST00000536187 CCDC189A1A4V9 331 aa17.36■□□□□ 0.37
CACNB3-202ENST00000536187 STX16-NPEPL1H3BU86 382 aa17.36■□□□□ 0.37
CACNB3-202ENST00000536187 STX16O14662 325 aa17.36■□□□□ 0.37
CACNB3-202ENST00000536187 CCNT2O60583 730 aaKnown RBP17.36■□□□□ 0.37
CACNB3-202ENST00000536187 RXRGP48443 463 aa17.36■□□□□ 0.37
CACNB3-202ENST00000536187 AP1S2P56377 157 aa17.36■□□□□ 0.37
CACNB3-202ENST00000536187 NAE1Q13564 534 aa17.36■□□□□ 0.37
CACNB3-202ENST00000536187 GPR18Q14330 331 aa17.36■□□□□ 0.37
CACNB3-202ENST00000536187 PLA2G2CQ5R387 149 aa17.36■□□□□ 0.37
CACNB3-202ENST00000536187 SULT1C3Q6IMI6 304 aa17.36■□□□□ 0.37
CACNB3-202ENST00000536187 CGB2Q6NT52 195 aa17.36■□□□□ 0.37
CACNB3-202ENST00000536187 AGR3Q8TD06 166 aa17.36■□□□□ 0.37
CACNB3-202ENST00000536187 UBTD2Q8WUN7 234 aa17.36■□□□□ 0.37
CACNB3-202ENST00000536187 CCDC138Q96M89 665 aa17.36■□□□□ 0.37
CACNB3-202ENST00000536187 CD244Q9BZW8 370 aa17.36■□□□□ 0.37
CACNB3-202ENST00000536187 SLC40A1Q9NP59 571 aa17.36■□□□□ 0.37
CACNB3-202ENST00000536187 ZNF225Q9UK10 706 aa17.36■□□□□ 0.37
CACNB3-202ENST00000536187 GMEB2Q9UKD1 530 aa17.36■□□□□ 0.37
CACNB3-202ENST00000536187 SLC6A14Q9UN76 642 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms